Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 RNU6-395P-201ENST00000365662 106 ntBASIC-0.07□□□□□ -2.42
CCDC58Q4VC31 SNORA75B-201ENST00000384053 137 ntBASIC-0.07□□□□□ -2.42
CCDC58Q4VC31 RNU6-701P-201ENST00000384059 107 ntBASIC-0.07□□□□□ -2.42
CCDC58Q4VC31 Y_RNA.476-201ENST00000384347 108 ntBASIC-0.07□□□□□ -2.42
CCDC58Q4VC31 RNU6-505P-201ENST00000384427 107 ntBASIC-0.07□□□□□ -2.42
CCDC58Q4VC31 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC-0.07□□□□□ -2.42
CCDC58Q4VC31 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC-0.07□□□□□ -2.42
CCDC58Q4VC31 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC-0.07□□□□□ -2.42
CCDC58Q4VC31 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC-0.07□□□□□ -2.42
CCDC58Q4VC31 RNU6-1041P-201ENST00000516254 102 ntBASIC-0.07□□□□□ -2.42
CCDC58Q4VC31 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC-0.07□□□□□ -2.42
CCDC58Q4VC31 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC-0.07□□□□□ -2.42
CCDC58Q4VC31 Z98751.3-201ENST00000604447 521 ntBASIC-0.07□□□□□ -2.42
CCDC58Q4VC31 AL353149.1-201ENST00000610667 244 ntBASIC-0.07□□□□□ -2.42
CCDC58Q4VC31 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC-0.07□□□□□ -2.42
CCDC58Q4VC31 AL079343.1-201ENST00000572358 1771 ntBASIC-0.07□□□□□ -2.42
CCDC58Q4VC31 RNU6-37P-201ENST00000362692 107 ntBASIC-0.08□□□□□ -2.42
CCDC58Q4VC31 RNU6-11P-201ENST00000364234 107 ntBASIC-0.08□□□□□ -2.42
CCDC58Q4VC31 SNORA72.2-201ENST00000365028 127 ntBASIC-0.08□□□□□ -2.42
CCDC58Q4VC31 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC-0.08□□□□□ -2.42
CCDC58Q4VC31 RNU6-1-201ENST00000383898 107 ntBASIC-0.08□□□□□ -2.42
CCDC58Q4VC31 SNORA36.2-201ENST00000384004 127 ntBASIC-0.08□□□□□ -2.42
CCDC58Q4VC31 RNU6-42P-201ENST00000384165 107 ntBASIC-0.08□□□□□ -2.42
CCDC58Q4VC31 RNU6-36P-201ENST00000384172 107 ntBASIC-0.08□□□□□ -2.42
CCDC58Q4VC31 RNU6-4P-201ENST00000384205 107 ntBASIC-0.08□□□□□ -2.42
CCDC58Q4VC31 RNU6-5P-201ENST00000384238 107 ntBASIC-0.08□□□□□ -2.42
CCDC58Q4VC31 RNU6-3P-201ENST00000384314 107 ntBASIC-0.08□□□□□ -2.42
CCDC58Q4VC31 RNU6-2-201ENST00000384627 107 ntBASIC-0.08□□□□□ -2.42
CCDC58Q4VC31 RNU6-9-201ENST00000384776 107 ntBASIC-0.08□□□□□ -2.42
CCDC58Q4VC31 RNU6-33P-201ENST00000384793 107 ntBASIC-0.08□□□□□ -2.42
CCDC58Q4VC31 MIR19A-201ENST00000384878 82 ntBASIC-0.08□□□□□ -2.42
CCDC58Q4VC31 SNORA75.2-201ENST00000391138 150 ntBASIC-0.08□□□□□ -2.42
CCDC58Q4VC31 SNORA75.3-201ENST00000391231 150 ntBASIC-0.08□□□□□ -2.42
CCDC58Q4VC31 Y_RNA.623-201ENST00000411128 95 ntBASIC-0.08□□□□□ -2.42
CCDC58Q4VC31 AC244098.3-201ENST00000424803 96 ntBASIC-0.08□□□□□ -2.42
CCDC58Q4VC31 AC073614.1-201ENST00000438690 650 ntBASIC-0.08□□□□□ -2.42
CCDC58Q4VC31 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC-0.08□□□□□ -2.42
CCDC58Q4VC31 HMGN1P12-201ENST00000499125 195 ntBASIC-0.08□□□□□ -2.42
CCDC58Q4VC31 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC-0.08□□□□□ -2.42
CCDC58Q4VC31 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC-0.08□□□□□ -2.42
CCDC58Q4VC31 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC-0.08□□□□□ -2.42
CCDC58Q4VC31 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC-0.08□□□□□ -2.42
CCDC58Q4VC31 AL450270.1-201ENST00000606160 391 ntBASIC-0.08□□□□□ -2.42
CCDC58Q4VC31 RNU6-6P-201ENST00000606623 107 ntBASIC-0.08□□□□□ -2.42
CCDC58Q4VC31 MTND4P5-201ENST00000435821 1374 ntBASIC-0.08□□□□□ -2.42
CCDC58Q4VC31 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC-0.09□□□□□ -2.42
CCDC58Q4VC31 RNU4-15P-201ENST00000362613 141 ntBASIC-0.09□□□□□ -2.42
CCDC58Q4VC31 RNU2-70P-201ENST00000410718 179 ntBASIC-0.09□□□□□ -2.42
CCDC58Q4VC31 RNU4-27P-201ENST00000410889 139 ntBASIC-0.09□□□□□ -2.42
CCDC58Q4VC31 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC-0.09□□□□□ -2.42
CCDC58Q4VC31 AC010531.2-201ENST00000465012 153 ntBASIC-0.09□□□□□ -2.42
CCDC58Q4VC31 AC026414.1-201ENST00000504046 698 ntBASIC-0.09□□□□□ -2.42
CCDC58Q4VC31 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC-0.09□□□□□ -2.42
CCDC58Q4VC31 SNORA70.12-201ENST00000516084 153 ntBASIC-0.09□□□□□ -2.42
CCDC58Q4VC31 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC-0.09□□□□□ -2.42
CCDC58Q4VC31 AC080078.2-201ENST00000603766 501 ntBASIC-0.09□□□□□ -2.42
CCDC58Q4VC31 AC112204.3-201ENST00000623822 332 ntBASIC-0.09□□□□□ -2.42
CCDC58Q4VC31 SCARNA4-202ENST00000625402 129 ntBASIC-0.09□□□□□ -2.42
CCDC58Q4VC31 OR5AK4P-201ENST00000635912 903 ntBASIC-0.09□□□□□ -2.42
CCDC58Q4VC31 AC100810.6-201ENST00000638068 285 ntBASIC-0.09□□□□□ -2.42
CCDC58Q4VC31 MIR411-201ENST00000362239 96 ntBASIC-0.1□□□□□ -2.43
CCDC58Q4VC31 MIR32-201ENST00000384965 70 ntBASIC-0.1□□□□□ -2.43
CCDC58Q4VC31 RNU1-139P-201ENST00000391307 165 ntBASIC-0.1□□□□□ -2.43
CCDC58Q4VC31 FCF1P10-201ENST00000407590 479 ntBASIC-0.1□□□□□ -2.43
CCDC58Q4VC31 UBE2V1P15-201ENST00000407776 448 ntBASIC-0.1□□□□□ -2.43
CCDC58Q4VC31 C1DP2-201ENST00000418167 426 ntBASIC-0.1□□□□□ -2.43
CCDC58Q4VC31 AC002486.1-201ENST00000435098 391 ntBASIC-0.1□□□□□ -2.43
CCDC58Q4VC31 RPL7P55-201ENST00000450522 746 ntBASIC-0.1□□□□□ -2.43
CCDC58Q4VC31 C1DP4-201ENST00000455429 424 ntBASIC-0.1□□□□□ -2.43
CCDC58Q4VC31 AC006026.2-201ENST00000457376 180 ntBASIC-0.1□□□□□ -2.43
CCDC58Q4VC31 AC121161.1-201ENST00000510606 652 ntBASIC-0.1□□□□□ -2.43
CCDC58Q4VC31 RNU6-914P-201ENST00000516749 109 ntBASIC-0.1□□□□□ -2.43
CCDC58Q4VC31 NTS-203ENST00000551529 801 ntTSL 3 BASIC-0.1□□□□□ -2.43
CCDC58Q4VC31 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC-0.1□□□□□ -2.43
CCDC58Q4VC31 AC122134.1-202ENST00000569111 1201 ntBASIC-0.1□□□□□ -2.43
CCDC58Q4VC31 MTND5P42-201ENST00000637720 498 ntBASIC-0.1□□□□□ -2.43
CCDC58Q4VC31 SNORD56.1-201ENST00000362913 68 ntBASIC-0.11□□□□□ -2.43
CCDC58Q4VC31 SNORD41-201ENST00000386967 70 ntBASIC-0.11□□□□□ -2.43
CCDC58Q4VC31 RNU2-42P-201ENST00000410697 113 ntBASIC-0.11□□□□□ -2.43
CCDC58Q4VC31 RNA5SP222-201ENST00000411039 105 ntBASIC-0.11□□□□□ -2.43
CCDC58Q4VC31 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC-0.11□□□□□ -2.43
CCDC58Q4VC31 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC-0.11□□□□□ -2.43
CCDC58Q4VC31 MTND5P2-201ENST00000442927 1142 ntBASIC-0.11□□□□□ -2.43
CCDC58Q4VC31 SEPT14P24-201ENST00000447236 180 ntBASIC-0.11□□□□□ -2.43
CCDC58Q4VC31 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC-0.11□□□□□ -2.43
CCDC58Q4VC31 AC016925.1-201ENST00000458303 298 ntBASIC-0.11□□□□□ -2.43
CCDC58Q4VC31 SRRM1P2-201ENST00000464531 1192 ntBASIC-0.11□□□□□ -2.43
CCDC58Q4VC31 CYCTP-201ENST00000504253 315 ntBASIC-0.11□□□□□ -2.43
CCDC58Q4VC31 KRTAP13-6P-201ENST00000508999 371 ntBASIC-0.11□□□□□ -2.43
CCDC58Q4VC31 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC-0.11□□□□□ -2.43
CCDC58Q4VC31 AC090888.2-201ENST00000559765 1144 ntBASIC-0.11□□□□□ -2.43
CCDC58Q4VC31 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC-0.11□□□□□ -2.43
CCDC58Q4VC31 AL929325.1-201ENST00000603096 117 ntBASIC-0.11□□□□□ -2.43
CCDC58Q4VC31 7SK.10-201ENST00000621414 298 ntBASIC-0.11□□□□□ -2.43
CCDC58Q4VC31 RNY1P8-201ENST00000383970 114 ntBASIC-0.12□□□□□ -2.43
CCDC58Q4VC31 U6.112-201ENST00000384129 70 ntBASIC-0.12□□□□□ -2.43
CCDC58Q4VC31 RNU6-1067P-201ENST00000384752 107 ntBASIC-0.12□□□□□ -2.43
CCDC58Q4VC31 MIR499A-201ENST00000384903 122 ntBASIC-0.12□□□□□ -2.43
CCDC58Q4VC31 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC-0.12□□□□□ -2.43
CCDC58Q4VC31 AL627311.1-201ENST00000431514 115 ntBASIC-0.12□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 159.5 ms