Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 MIR29B2-201ENST00000385055 81 ntBASIC3.64□□□□□ -1.83
CCDC144BQ3MJ40 MIR559-201ENST00000385188 96 ntBASIC3.64□□□□□ -1.83
CCDC144BQ3MJ40 RPS26P42-201ENST00000413485 326 ntBASIC3.64□□□□□ -1.83
CCDC144BQ3MJ40 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC144BQ3MJ40 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC144BQ3MJ40 AC009969.1-201ENST00000438726 172 ntBASIC3.64□□□□□ -1.83
CCDC144BQ3MJ40 AC025750.2-201ENST00000442609 450 ntBASIC3.64□□□□□ -1.83
CCDC144BQ3MJ40 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC144BQ3MJ40 MIR2053-201ENST00000459295 91 ntBASIC3.64□□□□□ -1.83
CCDC144BQ3MJ40 AC021146.2-201ENST00000504736 556 ntBASIC3.64□□□□□ -1.83
CCDC144BQ3MJ40 RNA5SP217-201ENST00000515959 91 ntBASIC3.64□□□□□ -1.83
CCDC144BQ3MJ40 SNORA31.16-201ENST00000516773 139 ntBASIC3.64□□□□□ -1.83
CCDC144BQ3MJ40 RNU7-4P-201ENST00000516961 62 ntBASIC3.64□□□□□ -1.83
CCDC144BQ3MJ40 AP002404.1-201ENST00000532005 451 ntBASIC3.64□□□□□ -1.83
CCDC144BQ3MJ40 SNRPGP18-201ENST00000553000 214 ntBASIC3.64□□□□□ -1.83
CCDC144BQ3MJ40 AC004832.5-201ENST00000608677 401 ntBASIC3.64□□□□□ -1.83
CCDC144BQ3MJ40 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
CCDC144BQ3MJ40 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC144BQ3MJ40 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC144BQ3MJ40 FAM35CP-201ENST00000554755 2470 ntBASIC3.64□□□□□ -1.83
CCDC144BQ3MJ40 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC144BQ3MJ40 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
CCDC144BQ3MJ40 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC144BQ3MJ40 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC144BQ3MJ40 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC144BQ3MJ40 RNU6-1115P-201ENST00000362490 106 ntBASIC3.63□□□□□ -1.83
CCDC144BQ3MJ40 Y_RNA.112-201ENST00000363250 102 ntBASIC3.63□□□□□ -1.83
CCDC144BQ3MJ40 RNU6-1227P-201ENST00000383981 107 ntBASIC3.63□□□□□ -1.83
CCDC144BQ3MJ40 Y_RNA.463-201ENST00000384271 102 ntBASIC3.63□□□□□ -1.83
CCDC144BQ3MJ40 MIR627-201ENST00000384979 97 ntBASIC3.63□□□□□ -1.83
CCDC144BQ3MJ40 MIR625-201ENST00000385047 85 ntBASIC3.63□□□□□ -1.83
CCDC144BQ3MJ40 MIR153-2-201ENST00000385225 87 ntBASIC3.63□□□□□ -1.83
CCDC144BQ3MJ40 SNORA12.2-201ENST00000391040 156 ntBASIC3.63□□□□□ -1.83
CCDC144BQ3MJ40 RNA5SP229-201ENST00000410809 99 ntBASIC3.63□□□□□ -1.83
CCDC144BQ3MJ40 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC144BQ3MJ40 AC007677.1-201ENST00000445757 515 ntBASIC3.63□□□□□ -1.83
CCDC144BQ3MJ40 Z96811.1-201ENST00000445880 108 ntBASIC3.63□□□□□ -1.83
CCDC144BQ3MJ40 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC144BQ3MJ40 AC008885.1-201ENST00000514930 301 ntBASIC3.63□□□□□ -1.83
CCDC144BQ3MJ40 Y_RNA.706-201ENST00000516933 99 ntBASIC3.63□□□□□ -1.83
CCDC144BQ3MJ40 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC144BQ3MJ40 AC004584.2-201ENST00000570407 410 ntBASIC3.63□□□□□ -1.83
CCDC144BQ3MJ40 UBL5P2-201ENST00000583788 219 ntBASIC3.63□□□□□ -1.83
CCDC144BQ3MJ40 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CCDC144BQ3MJ40 AL138963.2-201ENST00000605137 226 ntBASIC3.63□□□□□ -1.83
CCDC144BQ3MJ40 AC093732.2-201ENST00000607950 274 ntBASIC3.63□□□□□ -1.83
CCDC144BQ3MJ40 uc_338.1-201ENST00000612113 180 ntBASIC3.63□□□□□ -1.83
CCDC144BQ3MJ40 AC005520.5-201ENST00000613926 164 ntBASIC3.63□□□□□ -1.83
CCDC144BQ3MJ40 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC144BQ3MJ40 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC144BQ3MJ40 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC144BQ3MJ40 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
CCDC144BQ3MJ40 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC144BQ3MJ40 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
CCDC144BQ3MJ40 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.62□□□□□ -1.83
CCDC144BQ3MJ40 MIR369-201ENST00000362155 70 ntBASIC3.62□□□□□ -1.83
CCDC144BQ3MJ40 RNU6-461P-201ENST00000364195 107 ntBASIC3.62□□□□□ -1.83
CCDC144BQ3MJ40 Y_RNA.252-201ENST00000364556 101 ntBASIC3.62□□□□□ -1.83
CCDC144BQ3MJ40 Y_RNA.445-201ENST00000384168 102 ntBASIC3.62□□□□□ -1.83
CCDC144BQ3MJ40 SNORA36A-201ENST00000384221 132 ntBASIC3.62□□□□□ -1.83
CCDC144BQ3MJ40 SNORA7.4-201ENST00000384249 137 ntBASIC3.62□□□□□ -1.83
CCDC144BQ3MJ40 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.62□□□□□ -1.83
CCDC144BQ3MJ40 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC144BQ3MJ40 CST9LP2-201ENST00000437612 320 ntBASIC3.62□□□□□ -1.83
CCDC144BQ3MJ40 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC144BQ3MJ40 OR2AQ1P-201ENST00000451972 200 ntBASIC3.62□□□□□ -1.83
CCDC144BQ3MJ40 Y_RNA.631-201ENST00000459607 101 ntBASIC3.62□□□□□ -1.83
CCDC144BQ3MJ40 AC140059.1-201ENST00000489238 361 ntBASIC3.62□□□□□ -1.83
CCDC144BQ3MJ40 AF186996.7-201ENST00000492781 209 ntBASIC3.62□□□□□ -1.83
CCDC144BQ3MJ40 SNORD116.3-201ENST00000517176 78 ntBASIC3.62□□□□□ -1.83
CCDC144BQ3MJ40 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC144BQ3MJ40 AL078605.1-201ENST00000603529 500 ntBASIC3.62□□□□□ -1.83
CCDC144BQ3MJ40 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.62□□□□□ -1.83
CCDC144BQ3MJ40 MIR5739-201ENST00000619803 80 ntBASIC3.62□□□□□ -1.83
CCDC144BQ3MJ40 AL137790.1-201ENST00000634283 177 ntBASIC3.62□□□□□ -1.83
CCDC144BQ3MJ40 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.62□□□□□ -1.83
CCDC144BQ3MJ40 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC144BQ3MJ40 AC069528.2-201ENST00000624849 1991 ntBASIC3.62□□□□□ -1.83
CCDC144BQ3MJ40 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC144BQ3MJ40 RNU6-137P-201ENST00000363680 108 ntBASIC3.61□□□□□ -1.83
CCDC144BQ3MJ40 Y_RNA.405-201ENST00000383979 100 ntBASIC3.61□□□□□ -1.83
CCDC144BQ3MJ40 Y_RNA.451-201ENST00000384200 100 ntBASIC3.61□□□□□ -1.83
CCDC144BQ3MJ40 Y_RNA.524-201ENST00000384564 100 ntBASIC3.61□□□□□ -1.83
CCDC144BQ3MJ40 Y_RNA.561-201ENST00000384694 100 ntBASIC3.61□□□□□ -1.83
CCDC144BQ3MJ40 AC104332.2-201ENST00000429959 156 ntBASIC3.61□□□□□ -1.83
CCDC144BQ3MJ40 EEF1B2P7-201ENST00000451177 676 ntBASIC3.61□□□□□ -1.83
CCDC144BQ3MJ40 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.61□□□□□ -1.83
CCDC144BQ3MJ40 CYP2C59P-201ENST00000457790 269 ntBASIC3.61□□□□□ -1.83
CCDC144BQ3MJ40 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC144BQ3MJ40 RNU6-699P-201ENST00000517081 110 ntBASIC3.61□□□□□ -1.83
CCDC144BQ3MJ40 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC144BQ3MJ40 AL356280.1-201ENST00000603614 379 ntBASIC3.61□□□□□ -1.83
CCDC144BQ3MJ40 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC144BQ3MJ40 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.61□□□□□ -1.83
CCDC144BQ3MJ40 AC008121.3-201ENST00000618726 433 ntBASIC3.61□□□□□ -1.83
CCDC144BQ3MJ40 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC144BQ3MJ40 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC144BQ3MJ40 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC144BQ3MJ40 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC144BQ3MJ40 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms