Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AC084824.5-201ENST00000612009 413 ntBASIC0.54□□□□□ -2.32
RFX7Q2KHR2 U6.42-201ENST00000618440 107 ntBASIC0.54□□□□□ -2.32
RFX7Q2KHR2 uc_338.17-201ENST00000619633 179 ntBASIC0.54□□□□□ -2.32
RFX7Q2KHR2 AC024940.5-201ENST00000622889 474 ntBASIC0.54□□□□□ -2.32
RFX7Q2KHR2 SCARNA4-202ENST00000625402 129 ntBASIC0.54□□□□□ -2.32
RFX7Q2KHR2 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.54□□□□□ -2.32
RFX7Q2KHR2 Y_RNA.311-201ENST00000365068 96 ntBASIC0.53□□□□□ -2.32
RFX7Q2KHR2 RNU6-438P-201ENST00000365561 103 ntBASIC0.53□□□□□ -2.32
RFX7Q2KHR2 MIR10A-201ENST00000385043 110 ntBASIC0.53□□□□□ -2.32
RFX7Q2KHR2 MIR548B-201ENST00000385247 97 ntBASIC0.53□□□□□ -2.32
RFX7Q2KHR2 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
RFX7Q2KHR2 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.53□□□□□ -2.32
RFX7Q2KHR2 ELOCP17-201ENST00000414751 326 ntBASIC0.53□□□□□ -2.32
RFX7Q2KHR2 VPS26BP1-201ENST00000417155 755 ntBASIC0.53□□□□□ -2.32
RFX7Q2KHR2 ELOCP9-201ENST00000418624 239 ntBASIC0.53□□□□□ -2.32
RFX7Q2KHR2 AC123900.1-201ENST00000420390 96 ntBASIC0.53□□□□□ -2.32
RFX7Q2KHR2 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.53□□□□□ -2.32
RFX7Q2KHR2 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.53□□□□□ -2.32
RFX7Q2KHR2 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC0.53□□□□□ -2.32
RFX7Q2KHR2 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.53□□□□□ -2.32
RFX7Q2KHR2 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC0.53□□□□□ -2.32
RFX7Q2KHR2 RPS26P45-201ENST00000471748 340 ntBASIC0.53□□□□□ -2.32
RFX7Q2KHR2 RNA5SP216-201ENST00000516111 123 ntBASIC0.53□□□□□ -2.32
RFX7Q2KHR2 SNORD60.2-201ENST00000516883 86 ntBASIC0.53□□□□□ -2.32
RFX7Q2KHR2 RNA5SP503-201ENST00000517047 117 ntBASIC0.53□□□□□ -2.32
RFX7Q2KHR2 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.53□□□□□ -2.32
RFX7Q2KHR2 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.53□□□□□ -2.32
RFX7Q2KHR2 LRRC6P1-201ENST00000532188 885 ntBASIC0.53□□□□□ -2.32
RFX7Q2KHR2 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC0.53□□□□□ -2.32
RFX7Q2KHR2 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.53□□□□□ -2.32
RFX7Q2KHR2 AP003465.2-201ENST00000602571 373 ntBASIC0.53□□□□□ -2.32
RFX7Q2KHR2 RNU6-190P-201ENST00000384154 102 ntBASIC0.52□□□□□ -2.33
RFX7Q2KHR2 MIR19B1-201ENST00000384829 87 ntBASIC0.52□□□□□ -2.33
RFX7Q2KHR2 RNU4-22P-201ENST00000411058 166 ntBASIC0.52□□□□□ -2.33
RFX7Q2KHR2 BTF3L4P1-201ENST00000413813 468 ntBASIC0.52□□□□□ -2.33
RFX7Q2KHR2 AC073614.1-201ENST00000438690 650 ntBASIC0.52□□□□□ -2.33
RFX7Q2KHR2 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC0.52□□□□□ -2.33
RFX7Q2KHR2 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.52□□□□□ -2.33
RFX7Q2KHR2 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
RFX7Q2KHR2 AC008088.1-201ENST00000580993 280 ntBASIC0.52□□□□□ -2.33
RFX7Q2KHR2 HMGN1P30-201ENST00000589286 268 ntBASIC0.52□□□□□ -2.33
RFX7Q2KHR2 AC008751.2-201ENST00000597885 980 ntBASIC0.52□□□□□ -2.33
RFX7Q2KHR2 AL355816.2-201ENST00000610049 647 ntBASIC0.52□□□□□ -2.33
RFX7Q2KHR2 AL159153.1-201ENST00000619688 317 ntBASIC0.52□□□□□ -2.33
RFX7Q2KHR2 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.52□□□□□ -2.33
RFX7Q2KHR2 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.52□□□□□ -2.33
RFX7Q2KHR2 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
RFX7Q2KHR2 SNORD114-24-201ENST00000365029 72 ntBASIC0.51□□□□□ -2.33
RFX7Q2KHR2 RNU6-331P-201ENST00000384724 107 ntBASIC0.51□□□□□ -2.33
RFX7Q2KHR2 RAP1BP3-201ENST00000407180 549 ntBASIC0.51□□□□□ -2.33
RFX7Q2KHR2 RN7SKP266-201ENST00000410232 287 ntBASIC0.51□□□□□ -2.33
RFX7Q2KHR2 RNU2-62P-201ENST00000410868 191 ntBASIC0.51□□□□□ -2.33
RFX7Q2KHR2 MTCO3P41-201ENST00000414801 328 ntBASIC0.51□□□□□ -2.33
RFX7Q2KHR2 TIMM9P1-201ENST00000436122 256 ntBASIC0.51□□□□□ -2.33
RFX7Q2KHR2 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.51□□□□□ -2.33
RFX7Q2KHR2 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.51□□□□□ -2.33
RFX7Q2KHR2 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.51□□□□□ -2.33
RFX7Q2KHR2 AL122001.1-201ENST00000457027 370 ntBASIC0.51□□□□□ -2.33
RFX7Q2KHR2 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.51□□□□□ -2.33
RFX7Q2KHR2 snoU13.30-201ENST00000458951 104 ntBASIC0.51□□□□□ -2.33
RFX7Q2KHR2 RAP1BP2-201ENST00000478270 544 ntBASIC0.51□□□□□ -2.33
RFX7Q2KHR2 SNORA43.2-201ENST00000516652 128 ntBASIC0.51□□□□□ -2.33
RFX7Q2KHR2 RNA5SP437-201ENST00000517249 129 ntBASIC0.51□□□□□ -2.33
RFX7Q2KHR2 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.51□□□□□ -2.33
RFX7Q2KHR2 AC091135.1-201ENST00000585943 307 ntBASIC0.51□□□□□ -2.33
RFX7Q2KHR2 VN1R82P-201ENST00000601481 356 ntBASIC0.51□□□□□ -2.33
RFX7Q2KHR2 AL136363.2-201ENST00000604173 851 ntBASIC0.51□□□□□ -2.33
RFX7Q2KHR2 AL365434.2-201ENST00000607979 234 ntBASIC0.51□□□□□ -2.33
RFX7Q2KHR2 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.51□□□□□ -2.33
RFX7Q2KHR2 AC245297.2-201ENST00000610119 565 ntBASIC0.51□□□□□ -2.33
RFX7Q2KHR2 AC068787.1-201ENST00000623908 691 ntBASIC0.51□□□□□ -2.33
RFX7Q2KHR2 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC0.51□□□□□ -2.33
RFX7Q2KHR2 RNU6-1019P-201ENST00000364424 107 ntBASIC0.5□□□□□ -2.33
RFX7Q2KHR2 SMIM11P1-201ENST00000369586 178 ntBASIC0.5□□□□□ -2.33
RFX7Q2KHR2 SNORA50A-201ENST00000384225 134 ntBASIC0.5□□□□□ -2.33
RFX7Q2KHR2 SNORA40.2-201ENST00000390847 128 ntBASIC0.5□□□□□ -2.33
RFX7Q2KHR2 SNRPEP8-201ENST00000442866 260 ntBASIC0.5□□□□□ -2.33
RFX7Q2KHR2 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
RFX7Q2KHR2 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.5□□□□□ -2.33
RFX7Q2KHR2 AC119751.4-201ENST00000507498 357 ntBASIC0.5□□□□□ -2.33
RFX7Q2KHR2 Y_RNA.687-201ENST00000516558 91 ntBASIC0.5□□□□□ -2.33
RFX7Q2KHR2 Y_RNA.689-201ENST00000516589 107 ntBASIC0.5□□□□□ -2.33
RFX7Q2KHR2 RNA5SP476-201ENST00000516613 103 ntBASIC0.5□□□□□ -2.33
RFX7Q2KHR2 SNORA70.22-201ENST00000517160 124 ntBASIC0.5□□□□□ -2.33
RFX7Q2KHR2 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC0.5□□□□□ -2.33
RFX7Q2KHR2 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.5□□□□□ -2.33
RFX7Q2KHR2 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.5□□□□□ -2.33
RFX7Q2KHR2 AL138889.2-201ENST00000603883 242 ntBASIC0.5□□□□□ -2.33
RFX7Q2KHR2 AC040896.1-201ENST00000613819 479 ntBASIC0.5□□□□□ -2.33
RFX7Q2KHR2 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.5□□□□□ -2.33
RFX7Q2KHR2 RNU1-96P-201ENST00000364163 162 ntBASIC0.49□□□□□ -2.33
RFX7Q2KHR2 SNORA75B-201ENST00000384053 137 ntBASIC0.49□□□□□ -2.33
RFX7Q2KHR2 RNU6-110P-201ENST00000384508 104 ntBASIC0.49□□□□□ -2.33
RFX7Q2KHR2 COX6CP10-201ENST00000416832 224 ntBASIC0.49□□□□□ -2.33
RFX7Q2KHR2 USP9YP21-201ENST00000420603 432 ntBASIC0.49□□□□□ -2.33
RFX7Q2KHR2 NDUFB1P2-201ENST00000449477 176 ntBASIC0.49□□□□□ -2.33
RFX7Q2KHR2 RPS27P22-201ENST00000478056 241 ntBASIC0.49□□□□□ -2.33
RFX7Q2KHR2 RNU6-197P-201ENST00000516680 100 ntBASIC0.49□□□□□ -2.33
RFX7Q2KHR2 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.49□□□□□ -2.33
RFX7Q2KHR2 BNIP3P6-201ENST00000549284 499 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms