Protein–RNA interactions for Protein: Q16799

RTN1, Reticulon-1, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1Q16799 AC002543.1-201ENST00000299783 1954 ntBASIC4.33□□□□□ -1.72
RTN1Q16799 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RTN1Q16799 Y_RNA.7-201ENST00000362352 102 ntBASIC4.33□□□□□ -1.72
RTN1Q16799 RNU6-449P-201ENST00000383914 107 ntBASIC4.33□□□□□ -1.72
RTN1Q16799 RNU6-22P-201ENST00000384355 107 ntBASIC4.33□□□□□ -1.72
RTN1Q16799 SNORA22C-201ENST00000384614 134 ntBASIC4.33□□□□□ -1.72
RTN1Q16799 U8.11-201ENST00000384699 133 ntBASIC4.33□□□□□ -1.72
RTN1Q16799 U8.12-201ENST00000384701 133 ntBASIC4.33□□□□□ -1.72
RTN1Q16799 RNU2-54P-201ENST00000410299 190 ntBASIC4.33□□□□□ -1.72
RTN1Q16799 SNORA57.3-201ENST00000411095 141 ntBASIC4.33□□□□□ -1.72
RTN1Q16799 RNU6-1199P-201ENST00000411249 104 ntBASIC4.33□□□□□ -1.72
RTN1Q16799 U8.18-201ENST00000459285 133 ntBASIC4.33□□□□□ -1.72
RTN1Q16799 AC008011.1-201ENST00000545989 227 ntBASIC4.33□□□□□ -1.72
RTN1Q16799 MIR5187-201ENST00000583479 76 ntBASIC4.33□□□□□ -1.72
RTN1Q16799 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC4.33□□□□□ -1.72
RTN1Q16799 AC091895.1-201ENST00000624494 256 ntBASIC4.33□□□□□ -1.72
RTN1Q16799 MIR3674-201ENST00000636576 68 ntBASIC4.33□□□□□ -1.72
RTN1Q16799 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RTN1Q16799 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RTN1Q16799 AL133383.2-201ENST00000622958 2336 ntBASIC4.33□□□□□ -1.72
RTN1Q16799 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RTN1Q16799 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
RTN1Q16799 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC4.32□□□□□ -1.72
RTN1Q16799 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.32□□□□□ -1.72
RTN1Q16799 RNU6-270P-201ENST00000364131 105 ntBASIC4.32□□□□□ -1.72
RTN1Q16799 MIR186-201ENST00000384988 86 ntBASIC4.32□□□□□ -1.72
RTN1Q16799 RNU2-2P-201ENST00000410396 191 ntBASIC4.32□□□□□ -1.72
RTN1Q16799 RNA5SP475-201ENST00000410568 110 ntBASIC4.32□□□□□ -1.72
RTN1Q16799 CYCSP19-201ENST00000411715 316 ntBASIC4.32□□□□□ -1.72
RTN1Q16799 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.32□□□□□ -1.72
RTN1Q16799 RNA5SP272-201ENST00000516095 111 ntBASIC4.32□□□□□ -1.72
RTN1Q16799 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.32□□□□□ -1.72
RTN1Q16799 RNU2-4P-201ENST00000606190 192 ntBASIC4.32□□□□□ -1.72
RTN1Q16799 U2.15-201ENST00000611544 191 ntBASIC4.32□□□□□ -1.72
RTN1Q16799 U2.16-201ENST00000613119 191 ntBASIC4.32□□□□□ -1.72
RTN1Q16799 U2.12-201ENST00000613778 191 ntBASIC4.32□□□□□ -1.72
RTN1Q16799 AL365222.1-201ENST00000614661 98 ntBASIC4.32□□□□□ -1.72
RTN1Q16799 U2.9-201ENST00000615427 191 ntBASIC4.32□□□□□ -1.72
RTN1Q16799 U2.11-201ENST00000616345 191 ntBASIC4.32□□□□□ -1.72
RTN1Q16799 U2.2-201ENST00000616535 191 ntBASIC4.32□□□□□ -1.72
RTN1Q16799 U2.3-201ENST00000617785 191 ntBASIC4.32□□□□□ -1.72
RTN1Q16799 U2.19-201ENST00000618602 191 ntBASIC4.32□□□□□ -1.72
RTN1Q16799 RNU2-1-201ENST00000618664 191 ntBASIC4.32□□□□□ -1.72
RTN1Q16799 U2.6-201ENST00000619225 191 ntBASIC4.32□□□□□ -1.72
RTN1Q16799 U2.5-201ENST00000619465 191 ntBASIC4.32□□□□□ -1.72
RTN1Q16799 U2.10-201ENST00000620268 191 ntBASIC4.32□□□□□ -1.72
RTN1Q16799 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.32□□□□□ -1.72
RTN1Q16799 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4.32□□□□□ -1.72
RTN1Q16799 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
RTN1Q16799 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RTN1Q16799 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.32□□□□□ -1.72
RTN1Q16799 AC007656.2-201ENST00000624902 4547 ntBASIC4.32□□□□□ -1.72
RTN1Q16799 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RTN1Q16799 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
RTN1Q16799 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.31□□□□□ -1.72
RTN1Q16799 RNA5SP322-201ENST00000363617 119 ntBASIC4.31□□□□□ -1.72
RTN1Q16799 Y_RNA.238-201ENST00000364441 102 ntBASIC4.31□□□□□ -1.72
RTN1Q16799 RNU4-17P-201ENST00000365598 141 ntBASIC4.31□□□□□ -1.72
RTN1Q16799 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.31□□□□□ -1.72
RTN1Q16799 SNORA18.3-201ENST00000384122 132 ntBASIC4.31□□□□□ -1.72
RTN1Q16799 Y_RNA.497-201ENST00000384447 98 ntBASIC4.31□□□□□ -1.72
RTN1Q16799 RNU6-1154P-201ENST00000391001 104 ntBASIC4.31□□□□□ -1.72
RTN1Q16799 U3.26-201ENST00000391236 204 ntBASIC4.31□□□□□ -1.72
RTN1Q16799 AC009963.1-201ENST00000417265 157 ntBASIC4.31□□□□□ -1.72
RTN1Q16799 NDUFB1P1-201ENST00000435191 180 ntBASIC4.31□□□□□ -1.72
RTN1Q16799 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC4.31□□□□□ -1.72
RTN1Q16799 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.31□□□□□ -1.72
RTN1Q16799 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.31□□□□□ -1.72
RTN1Q16799 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.31□□□□□ -1.72
RTN1Q16799 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.31□□□□□ -1.72
RTN1Q16799 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.31□□□□□ -1.72
RTN1Q16799 MIR3136-201ENST00000583498 78 ntBASIC4.31□□□□□ -1.72
RTN1Q16799 AC006380.1-201ENST00000603598 186 ntBASIC4.31□□□□□ -1.72
RTN1Q16799 SNRPGP20-201ENST00000604477 205 ntBASIC4.31□□□□□ -1.72
RTN1Q16799 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4.31□□□□□ -1.72
RTN1Q16799 AP000553.6-201ENST00000641242 118 ntBASIC4.31□□□□□ -1.72
RTN1Q16799 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.31□□□□□ -1.72
RTN1Q16799 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
RTN1Q16799 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RTN1Q16799 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.31□□□□□ -1.72
RTN1Q16799 AC006504.1-201ENST00000562493 3666 ntBASIC4.31□□□□□ -1.72
RTN1Q16799 AC106871.1-201ENST00000568324 3102 ntBASIC4.3□□□□□ -1.72
RTN1Q16799 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RTN1Q16799 RNU1-62P-201ENST00000362599 164 ntBASIC4.3□□□□□ -1.72
RTN1Q16799 RNU1-18P-201ENST00000363062 164 ntBASIC4.3□□□□□ -1.72
RTN1Q16799 RNU1-64P-201ENST00000365443 163 ntBASIC4.3□□□□□ -1.72
RTN1Q16799 RNU6-1027P-201ENST00000383998 107 ntBASIC4.3□□□□□ -1.72
RTN1Q16799 Y_RNA.488-201ENST00000384403 102 ntBASIC4.3□□□□□ -1.72
RTN1Q16799 RNU6-417P-201ENST00000384712 107 ntBASIC4.3□□□□□ -1.72
RTN1Q16799 PTMAP5-201ENST00000393073 333 ntBASIC4.3□□□□□ -1.72
RTN1Q16799 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.3□□□□□ -1.72
RTN1Q16799 AL445584.1-201ENST00000431451 330 ntBASIC4.3□□□□□ -1.72
RTN1Q16799 AL161651.1-201ENST00000440882 223 ntBASIC4.3□□□□□ -1.72
RTN1Q16799 NDUFS5P3-201ENST00000450668 321 ntBASIC4.3□□□□□ -1.72
RTN1Q16799 RN7SL93P-201ENST00000463035 293 ntBASIC4.3□□□□□ -1.72
RTN1Q16799 AL049830.2-201ENST00000480072 201 ntBASIC4.3□□□□□ -1.72
RTN1Q16799 AIG1P1-201ENST00000503376 148 ntBASIC4.3□□□□□ -1.72
RTN1Q16799 AC006445.2-201ENST00000510061 472 ntBASIC4.3□□□□□ -1.72
RTN1Q16799 AP002001.1-203ENST00000534002 267 ntBASIC4.3□□□□□ -1.72
RTN1Q16799 AC244505.7-201ENST00000599675 272 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms