Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 RNU4-62P-201ENST00000410125 130 ntBASIC1.64□□□□□ -2.15
SMARCB1Q12824 RNA5SP390-201ENST00000410191 113 ntBASIC1.64□□□□□ -2.15
SMARCB1Q12824 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.64□□□□□ -2.15
SMARCB1Q12824 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.64□□□□□ -2.15
SMARCB1Q12824 AL158823.1-201ENST00000418441 478 ntBASIC1.64□□□□□ -2.15
SMARCB1Q12824 BTF3P4-201ENST00000418852 495 ntBASIC1.64□□□□□ -2.15
SMARCB1Q12824 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.64□□□□□ -2.15
SMARCB1Q12824 AL513185.2-201ENST00000425543 193 ntBASIC1.64□□□□□ -2.15
SMARCB1Q12824 AC002486.1-201ENST00000435098 391 ntBASIC1.64□□□□□ -2.15
SMARCB1Q12824 AC243964.1-201ENST00000441814 261 ntBASIC1.64□□□□□ -2.15
SMARCB1Q12824 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.64□□□□□ -2.15
SMARCB1Q12824 AC079382.1-201ENST00000493346 557 ntBASIC1.64□□□□□ -2.15
SMARCB1Q12824 SNORA31.24-201ENST00000517232 57 ntBASIC1.64□□□□□ -2.15
SMARCB1Q12824 RNU6-586P-201ENST00000517265 104 ntBASIC1.64□□□□□ -2.15
SMARCB1Q12824 AC107953.1-201ENST00000522216 297 ntBASIC1.64□□□□□ -2.15
SMARCB1Q12824 AL137161.1-201ENST00000532231 390 ntBASIC1.64□□□□□ -2.15
SMARCB1Q12824 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.64□□□□□ -2.15
SMARCB1Q12824 MIR4285-201ENST00000581001 85 ntBASIC1.64□□□□□ -2.15
SMARCB1Q12824 PIGPP4-201ENST00000584447 307 ntBASIC1.64□□□□□ -2.15
SMARCB1Q12824 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
SMARCB1Q12824 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
SMARCB1Q12824 AP000648.3-201ENST00000623539 4507 ntBASIC1.64□□□□□ -2.15
SMARCB1Q12824 Y_RNA.1-201ENST00000352915 104 ntBASIC1.63□□□□□ -2.15
SMARCB1Q12824 snoU2_19.1-201ENST00000362361 80 ntBASIC1.63□□□□□ -2.15
SMARCB1Q12824 RNU6-996P-201ENST00000365438 107 ntBASIC1.63□□□□□ -2.15
SMARCB1Q12824 RNU6-517P-201ENST00000384362 110 ntBASIC1.63□□□□□ -2.15
SMARCB1Q12824 Y_RNA.582-201ENST00000391023 95 ntBASIC1.63□□□□□ -2.15
SMARCB1Q12824 CBX3P9-201ENST00000402326 552 ntBASIC1.63□□□□□ -2.15
SMARCB1Q12824 RNU2-29P-201ENST00000410423 189 ntBASIC1.63□□□□□ -2.15
SMARCB1Q12824 RNU2-66P-201ENST00000410650 161 ntBASIC1.63□□□□□ -2.15
SMARCB1Q12824 RNA5SP450-201ENST00000411206 102 ntBASIC1.63□□□□□ -2.15
SMARCB1Q12824 VN1R36P-201ENST00000414936 291 ntBASIC1.63□□□□□ -2.15
SMARCB1Q12824 AP1B1P2-201ENST00000416196 106 ntBASIC1.63□□□□□ -2.15
SMARCB1Q12824 AL117339.3-201ENST00000418733 162 ntBASIC1.63□□□□□ -2.15
SMARCB1Q12824 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.63□□□□□ -2.15
SMARCB1Q12824 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.63□□□□□ -2.15
SMARCB1Q12824 AL606489.2-201ENST00000433886 234 ntBASIC1.63□□□□□ -2.15
SMARCB1Q12824 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.63□□□□□ -2.15
SMARCB1Q12824 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.63□□□□□ -2.15
SMARCB1Q12824 AC012308.1-201ENST00000451232 178 ntBASIC1.63□□□□□ -2.15
SMARCB1Q12824 AC013470.1-201ENST00000453438 462 ntBASIC1.63□□□□□ -2.15
SMARCB1Q12824 CYP2C59P-201ENST00000457790 269 ntBASIC1.63□□□□□ -2.15
SMARCB1Q12824 RNU7-63P-201ENST00000459054 62 ntBASIC1.63□□□□□ -2.15
SMARCB1Q12824 RN7SKP210-201ENST00000459176 261 ntBASIC1.63□□□□□ -2.15
SMARCB1Q12824 RPS3AP17-201ENST00000472594 777 ntBASIC1.63□□□□□ -2.15
SMARCB1Q12824 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.63□□□□□ -2.15
SMARCB1Q12824 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.63□□□□□ -2.15
SMARCB1Q12824 HMGB1P29-201ENST00000505659 499 ntBASIC1.63□□□□□ -2.15
SMARCB1Q12824 MTND2P33-201ENST00000506452 1031 ntBASIC1.63□□□□□ -2.15
SMARCB1Q12824 AC096745.1-201ENST00000509945 370 ntBASIC1.63□□□□□ -2.15
SMARCB1Q12824 AC105417.1-201ENST00000514691 285 ntBASIC1.63□□□□□ -2.15
SMARCB1Q12824 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.63□□□□□ -2.15
SMARCB1Q12824 AC034114.1-201ENST00000520293 285 ntBASIC1.63□□□□□ -2.15
SMARCB1Q12824 AP003392.2-201ENST00000527269 208 ntBASIC1.63□□□□□ -2.15
SMARCB1Q12824 CYCSP27-201ENST00000527643 293 ntBASIC1.63□□□□□ -2.15
SMARCB1Q12824 DNAJC19P9-201ENST00000555084 351 ntBASIC1.63□□□□□ -2.15
SMARCB1Q12824 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.63□□□□□ -2.15
SMARCB1Q12824 MIR4424-201ENST00000585257 86 ntBASIC1.63□□□□□ -2.15
SMARCB1Q12824 ELOCP5-201ENST00000604924 333 ntBASIC1.63□□□□□ -2.15
SMARCB1Q12824 AC007684.1-201ENST00000609671 477 ntBASIC1.63□□□□□ -2.15
SMARCB1Q12824 AL773524.1-201ENST00000614065 229 ntBASIC1.63□□□□□ -2.15
SMARCB1Q12824 uc_338.11-201ENST00000619132 160 ntBASIC1.63□□□□□ -2.15
SMARCB1Q12824 AC068792.1-201ENST00000621354 417 ntBASIC1.63□□□□□ -2.15
SMARCB1Q12824 AC005609.4-201ENST00000625071 447 ntBASIC1.63□□□□□ -2.15
SMARCB1Q12824 WWP1P1-201ENST00000466609 2769 ntBASIC1.63□□□□□ -2.15
SMARCB1Q12824 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.62□□□□□ -2.15
SMARCB1Q12824 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.62□□□□□ -2.15
SMARCB1Q12824 U3.13-201ENST00000364804 214 ntBASIC1.62□□□□□ -2.15
SMARCB1Q12824 Y_RNA.399-201ENST00000383955 105 ntBASIC1.62□□□□□ -2.15
SMARCB1Q12824 Y_RNA.409-201ENST00000383990 98 ntBASIC1.62□□□□□ -2.15
SMARCB1Q12824 RNU5A-6P-201ENST00000384136 116 ntBASIC1.62□□□□□ -2.15
SMARCB1Q12824 RNU6-434P-201ENST00000384376 107 ntBASIC1.62□□□□□ -2.15
SMARCB1Q12824 MIR544A-201ENST00000384855 91 ntBASIC1.62□□□□□ -2.15
SMARCB1Q12824 Y_RNA.595-201ENST00000410403 105 ntBASIC1.62□□□□□ -2.15
SMARCB1Q12824 RNU4-55P-201ENST00000410731 137 ntBASIC1.62□□□□□ -2.15
SMARCB1Q12824 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.62□□□□□ -2.15
SMARCB1Q12824 MTND2P22-201ENST00000444325 1033 ntBASIC1.62□□□□□ -2.15
SMARCB1Q12824 RPL39P29-201ENST00000447779 157 ntBASIC1.62□□□□□ -2.15
SMARCB1Q12824 MTND1P29-201ENST00000448112 647 ntBASIC1.62□□□□□ -2.15
SMARCB1Q12824 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.62□□□□□ -2.15
SMARCB1Q12824 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.62□□□□□ -2.15
SMARCB1Q12824 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.62□□□□□ -2.15
SMARCB1Q12824 SNRPFP3-201ENST00000457792 225 ntBASIC1.62□□□□□ -2.15
SMARCB1Q12824 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.62□□□□□ -2.15
SMARCB1Q12824 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
SMARCB1Q12824 LRRC34P2-201ENST00000514850 553 ntBASIC1.62□□□□□ -2.15
SMARCB1Q12824 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.62□□□□□ -2.15
SMARCB1Q12824 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.62□□□□□ -2.15
SMARCB1Q12824 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.62□□□□□ -2.15
SMARCB1Q12824 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.62□□□□□ -2.15
SMARCB1Q12824 AC090115.3-201ENST00000553218 849 ntBASIC1.62□□□□□ -2.15
SMARCB1Q12824 AL118558.2-201ENST00000556294 238 ntBASIC1.62□□□□□ -2.15
SMARCB1Q12824 AC091135.1-201ENST00000585943 307 ntBASIC1.62□□□□□ -2.15
SMARCB1Q12824 AL136363.2-201ENST00000604173 851 ntBASIC1.62□□□□□ -2.15
SMARCB1Q12824 uc_338.5-201ENST00000611839 155 ntBASIC1.62□□□□□ -2.15
SMARCB1Q12824 Z99129.1-201ENST00000612510 255 ntBASIC1.62□□□□□ -2.15
SMARCB1Q12824 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
SMARCB1Q12824 AL354950.2-201ENST00000617939 290 ntBASIC1.62□□□□□ -2.15
SMARCB1Q12824 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.62□□□□□ -2.15
SMARCB1Q12824 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms