Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 RNU5A-1-201ENST00000362698 116 ntBASIC-1.27□□□□□ -2.61
RPL39P62891 RNA5SP368-201ENST00000364298 116 ntBASIC-1.27□□□□□ -2.61
RPL39P62891 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC-1.27□□□□□ -2.61
RPL39P62891 AC087499.4-201ENST00000448505 178 ntBASIC-1.27□□□□□ -2.61
RPL39P62891 RNU1-131P-201ENST00000458943 161 ntBASIC-1.27□□□□□ -2.61
RPL39P62891 RNU4ATAC10P-201ENST00000516967 122 ntBASIC-1.27□□□□□ -2.61
RPL39P62891 RN7SKP256-201ENST00000517201 314 ntBASIC-1.27□□□□□ -2.61
RPL39P62891 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC-1.27□□□□□ -2.61
RPL39P62891 AL713998.2-201ENST00000604538 1198 ntBASIC-1.27□□□□□ -2.61
RPL39P62891 AL034555.1-201ENST00000604816 211 ntBASIC-1.27□□□□□ -2.61
RPL39P62891 SNORA25.7-201ENST00000364375 127 ntBASIC-1.28□□□□□ -2.61
RPL39P62891 RNU6-480P-201ENST00000384332 107 ntBASIC-1.28□□□□□ -2.61
RPL39P62891 MIR514A1-201ENST00000385133 98 ntBASIC-1.28□□□□□ -2.61
RPL39P62891 MTCO1P19-201ENST00000443487 500 ntBASIC-1.28□□□□□ -2.61
RPL39P62891 MTND1P17-201ENST00000448961 204 ntBASIC-1.28□□□□□ -2.61
RPL39P62891 OFD1P7Y-201ENST00000454643 1155 ntBASIC-1.28□□□□□ -2.61
RPL39P62891 RNU6-138P-201ENST00000515952 107 ntBASIC-1.28□□□□□ -2.61
RPL39P62891 RNU6-1278P-201ENST00000516130 107 ntBASIC-1.28□□□□□ -2.61
RPL39P62891 SNORD60.2-201ENST00000516883 86 ntBASIC-1.28□□□□□ -2.61
RPL39P62891 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC-1.28□□□□□ -2.61
RPL39P62891 AP002453.2-201ENST00000533503 320 ntBASIC-1.28□□□□□ -2.61
RPL39P62891 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC-1.28□□□□□ -2.61
RPL39P62891 MIR103A2-201ENST00000362154 78 ntBASIC-1.29□□□□□ -2.62
RPL39P62891 SNORD114-14-201ENST00000362723 75 ntBASIC-1.29□□□□□ -2.62
RPL39P62891 MIR635-201ENST00000384830 98 ntBASIC-1.29□□□□□ -2.62
RPL39P62891 MIR454-201ENST00000390180 115 ntBASIC-1.29□□□□□ -2.62
RPL39P62891 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-1.29□□□□□ -2.62
RPL39P62891 AL162725.1-201ENST00000435405 301 ntBASIC-1.29□□□□□ -2.62
RPL39P62891 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC-1.29□□□□□ -2.62
RPL39P62891 MRPL42P4-201ENST00000453267 443 ntBASIC-1.29□□□□□ -2.62
RPL39P62891 MTCO2P18-201ENST00000457151 658 ntBASIC-1.29□□□□□ -2.62
RPL39P62891 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC-1.29□□□□□ -2.62
RPL39P62891 RNU6-922P-201ENST00000516753 99 ntBASIC-1.29□□□□□ -2.62
RPL39P62891 RNU6-782P-201ENST00000516852 104 ntBASIC-1.29□□□□□ -2.62
RPL39P62891 LRRC34P1-201ENST00000542742 915 ntBASIC-1.29□□□□□ -2.62
RPL39P62891 SUB1P2-201ENST00000556401 297 ntBASIC-1.29□□□□□ -2.62
RPL39P62891 AC087685.1-201ENST00000587507 141 ntBASIC-1.29□□□□□ -2.62
RPL39P62891 uc_338.28-201ENST00000612082 187 ntBASIC-1.29□□□□□ -2.62
RPL39P62891 uc_338.16-201ENST00000621804 95 ntBASIC-1.29□□□□□ -2.62
RPL39P62891 SSR1P1-201ENST00000407630 814 ntBASIC-1.3□□□□□ -2.62
RPL39P62891 COX6CP10-201ENST00000416832 224 ntBASIC-1.3□□□□□ -2.62
RPL39P62891 AC002381.1-201ENST00000447049 280 ntBASIC-1.3□□□□□ -2.62
RPL39P62891 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-1.3□□□□□ -2.62
RPL39P62891 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC-1.3□□□□□ -2.62
RPL39P62891 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-1.3□□□□□ -2.62
RPL39P62891 AC036111.3-201ENST00000526389 112 ntBASIC-1.3□□□□□ -2.62
RPL39P62891 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC-1.3□□□□□ -2.62
RPL39P62891 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC-1.3□□□□□ -2.62
RPL39P62891 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC-1.3□□□□□ -2.62
RPL39P62891 RNU6-679P-201ENST00000391003 106 ntBASIC-1.31□□□□□ -2.62
RPL39P62891 SKA2P1-201ENST00000425592 390 ntBASIC-1.31□□□□□ -2.62
RPL39P62891 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC-1.31□□□□□ -2.62
RPL39P62891 AP003066.2-201ENST00000529375 555 ntBASIC-1.31□□□□□ -2.62
RPL39P62891 AC018630.3-201ENST00000542637 96 ntBASIC-1.31□□□□□ -2.62
RPL39P62891 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC-1.31□□□□□ -2.62
RPL39P62891 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC-1.31□□□□□ -2.62
RPL39P62891 MIR5695-201ENST00000579717 85 ntBASIC-1.31□□□□□ -2.62
RPL39P62891 MIR4263-201ENST00000584745 83 ntBASIC-1.31□□□□□ -2.62
RPL39P62891 AL109659.3-201ENST00000624985 950 ntBASIC-1.31□□□□□ -2.62
RPL39P62891 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC-1.31□□□□□ -2.62
RPL39P62891 RNU6-1019P-201ENST00000364424 107 ntBASIC-1.32□□□□□ -2.62
RPL39P62891 RNU6-1274P-201ENST00000384557 107 ntBASIC-1.32□□□□□ -2.62
RPL39P62891 AL109755.1-201ENST00000401791 649 ntBASIC-1.32□□□□□ -2.62
RPL39P62891 TXNL1P1-201ENST00000429528 554 ntBASIC-1.32□□□□□ -2.62
RPL39P62891 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC-1.32□□□□□ -2.62
RPL39P62891 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC-1.32□□□□□ -2.62
RPL39P62891 CECR9-201ENST00000453421 199 ntBASIC-1.32□□□□□ -2.62
RPL39P62891 AC113420.1-201ENST00000507903 571 ntBASIC-1.32□□□□□ -2.62
RPL39P62891 MTCYBP43-201ENST00000513621 740 ntBASIC-1.32□□□□□ -2.62
RPL39P62891 RNA5SP291-201ENST00000517222 105 ntBASIC-1.32□□□□□ -2.62
RPL39P62891 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC-1.32□□□□□ -2.62
RPL39P62891 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC-1.32□□□□□ -2.62
RPL39P62891 MIR4709-201ENST00000577272 72 ntBASIC-1.32□□□□□ -2.62
RPL39P62891 AC012213.4-201ENST00000606457 354 ntBASIC-1.32□□□□□ -2.62
RPL39P62891 AL133445.2-201ENST00000611191 527 ntBASIC-1.32□□□□□ -2.62
RPL39P62891 Y_RNA.256-201ENST00000364594 104 ntBASIC-1.33□□□□□ -2.62
RPL39P62891 SNORA8.2-201ENST00000384372 139 ntBASIC-1.33□□□□□ -2.62
RPL39P62891 MIR1827-201ENST00000408549 66 ntBASIC-1.33□□□□□ -2.62
RPL39P62891 USP9YP13-201ENST00000417797 480 ntBASIC-1.33□□□□□ -2.62
RPL39P62891 C1DP2-201ENST00000418167 426 ntBASIC-1.33□□□□□ -2.62
RPL39P62891 AC002486.1-201ENST00000435098 391 ntBASIC-1.33□□□□□ -2.62
RPL39P62891 AC012308.1-201ENST00000451232 178 ntBASIC-1.33□□□□□ -2.62
RPL39P62891 C1DP4-201ENST00000455429 424 ntBASIC-1.33□□□□□ -2.62
RPL39P62891 snoU13.30-201ENST00000458951 104 ntBASIC-1.33□□□□□ -2.62
RPL39P62891 AC109445.1-201ENST00000512356 383 ntBASIC-1.33□□□□□ -2.62
RPL39P62891 AC027419.1-201ENST00000522976 328 ntBASIC-1.33□□□□□ -2.62
RPL39P62891 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC-1.33□□□□□ -2.62
RPL39P62891 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC-1.33□□□□□ -2.62
RPL39P62891 AC080078.2-201ENST00000603766 501 ntBASIC-1.33□□□□□ -2.62
RPL39P62891 AC018926.3-201ENST00000618841 406 ntBASIC-1.33□□□□□ -2.62
RPL39P62891 MIR6755-201ENST00000619993 66 ntBASIC-1.33□□□□□ -2.62
RPL39P62891 AL162726.3-218ENST00000636401 95 ntBASIC-1.33□□□□□ -2.62
RPL39P62891 U2.21-201ENST00000637295 81 ntBASIC-1.33□□□□□ -2.62
RPL39P62891 RNU6-778P-201ENST00000363269 103 ntBASIC-1.34□□□□□ -2.62
RPL39P62891 ELOCP9-201ENST00000418624 239 ntBASIC-1.34□□□□□ -2.62
RPL39P62891 AP000797.1-201ENST00000478870 387 ntBASIC-1.34□□□□□ -2.62
RPL39P62891 Y_RNA.681-201ENST00000516445 113 ntBASIC-1.34□□□□□ -2.62
RPL39P62891 AC105036.1-201ENST00000566222 271 ntBASIC-1.34□□□□□ -2.62
RPL39P62891 AC093249.1-201ENST00000567049 203 ntBASIC-1.34□□□□□ -2.62
RPL39P62891 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC-1.34□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms