Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.93□□□□□ -2.1
RPS4XP62701 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
RPS4XP62701 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
RPS4XP62701 RNU4-15P-201ENST00000362613 141 ntBASIC1.93□□□□□ -2.1
RPS4XP62701 RNU6-611P-201ENST00000384276 104 ntBASIC1.93□□□□□ -2.1
RPS4XP62701 SNORA26.3-201ENST00000391119 136 ntBASIC1.93□□□□□ -2.1
RPS4XP62701 MIR1289-2-201ENST00000408360 111 ntBASIC1.93□□□□□ -2.1
RPS4XP62701 SNORA11.4-201ENST00000408823 129 ntBASIC1.93□□□□□ -2.1
RPS4XP62701 Y_RNA.597-201ENST00000410463 100 ntBASIC1.93□□□□□ -2.1
RPS4XP62701 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.93□□□□□ -2.1
RPS4XP62701 IFNA20P-201ENST00000436840 528 ntBASIC1.93□□□□□ -2.1
RPS4XP62701 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.93□□□□□ -2.1
RPS4XP62701 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.93□□□□□ -2.1
RPS4XP62701 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.93□□□□□ -2.1
RPS4XP62701 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.93□□□□□ -2.1
RPS4XP62701 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.93□□□□□ -2.1
RPS4XP62701 SNORA19.2-201ENST00000516013 114 ntBASIC1.93□□□□□ -2.1
RPS4XP62701 RNU6-667P-201ENST00000517186 102 ntBASIC1.93□□□□□ -2.1
RPS4XP62701 RNU6-323P-201ENST00000521915 107 ntBASIC1.93□□□□□ -2.1
RPS4XP62701 HSPE1P4-201ENST00000550617 308 ntBASIC1.93□□□□□ -2.1
RPS4XP62701 SNRPGP17-201ENST00000603780 214 ntBASIC1.93□□□□□ -2.1
RPS4XP62701 BNIP3P10-201ENST00000605360 577 ntBASIC1.93□□□□□ -2.1
RPS4XP62701 AC004492.1-201ENST00000607036 742 ntBASIC1.93□□□□□ -2.1
RPS4XP62701 AL357078.3-201ENST00000607528 618 ntBASIC1.93□□□□□ -2.1
RPS4XP62701 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.93□□□□□ -2.1
RPS4XP62701 AL121757.2-201ENST00000611223 313 ntBASIC1.93□□□□□ -2.1
RPS4XP62701 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
RPS4XP62701 AC092268.1-201ENST00000342691 405 ntBASIC1.92□□□□□ -2.1
RPS4XP62701 Y_RNA.3-201ENST00000362331 103 ntBASIC1.92□□□□□ -2.1
RPS4XP62701 RNY3P3-201ENST00000363816 102 ntBASIC1.92□□□□□ -2.1
RPS4XP62701 RNU6-1329P-201ENST00000365664 107 ntBASIC1.92□□□□□ -2.1
RPS4XP62701 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.92□□□□□ -2.1
RPS4XP62701 AL590556.1-201ENST00000423231 483 ntBASIC1.92□□□□□ -2.1
RPS4XP62701 SRIP2-201ENST00000428470 166 ntBASIC1.92□□□□□ -2.1
RPS4XP62701 WARS2P1-201ENST00000429678 537 ntBASIC1.92□□□□□ -2.1
RPS4XP62701 AL359672.1-201ENST00000442302 409 ntBASIC1.92□□□□□ -2.1
RPS4XP62701 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.92□□□□□ -2.1
RPS4XP62701 SNRPGP7-201ENST00000469016 106 ntBASIC1.92□□□□□ -2.1
RPS4XP62701 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.92□□□□□ -2.1
RPS4XP62701 ZNF519P2-201ENST00000557032 169 ntBASIC1.92□□□□□ -2.1
RPS4XP62701 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.92□□□□□ -2.1
RPS4XP62701 AC026271.5-201ENST00000577873 130 ntBASIC1.92□□□□□ -2.1
RPS4XP62701 AC010525.2-201ENST00000590920 195 ntBASIC1.92□□□□□ -2.1
RPS4XP62701 BNIP3P25-201ENST00000596023 559 ntBASIC1.92□□□□□ -2.1
RPS4XP62701 AC022202.1-201ENST00000613515 211 ntBASIC1.92□□□□□ -2.1
RPS4XP62701 AC063943.3-201ENST00000615562 356 ntBASIC1.92□□□□□ -2.1
RPS4XP62701 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
RPS4XP62701 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.91□□□□□ -2.1
RPS4XP62701 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
RPS4XP62701 RNU6-451P-201ENST00000362921 107 ntBASIC1.91□□□□□ -2.1
RPS4XP62701 RN7SKP32-201ENST00000410167 303 ntBASIC1.91□□□□□ -2.1
RPS4XP62701 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.91□□□□□ -2.1
RPS4XP62701 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.91□□□□□ -2.1
RPS4XP62701 AL590135.1-201ENST00000422215 156 ntBASIC1.91□□□□□ -2.1
RPS4XP62701 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.91□□□□□ -2.1
RPS4XP62701 AC019205.3-201ENST00000424573 156 ntBASIC1.91□□□□□ -2.1
RPS4XP62701 MTCO1P20-201ENST00000425366 358 ntBASIC1.91□□□□□ -2.1
RPS4XP62701 AL591806.2-201ENST00000433122 173 ntBASIC1.91□□□□□ -2.1
RPS4XP62701 AC016700.2-201ENST00000446011 156 ntBASIC1.91□□□□□ -2.1
RPS4XP62701 AL137159.1-201ENST00000452808 512 ntBASIC1.91□□□□□ -2.1
RPS4XP62701 AC025033.1-201ENST00000463883 194 ntBASIC1.91□□□□□ -2.1
RPS4XP62701 AC015911.1-201ENST00000495111 156 ntBASIC1.91□□□□□ -2.1
RPS4XP62701 AC090255.1-201ENST00000495779 349 ntBASIC1.91□□□□□ -2.1
RPS4XP62701 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.91□□□□□ -2.1
RPS4XP62701 AC016632.1-201ENST00000503994 196 ntBASIC1.91□□□□□ -2.1
RPS4XP62701 AC107953.1-201ENST00000522216 297 ntBASIC1.91□□□□□ -2.1
RPS4XP62701 AC109635.3-201ENST00000529536 185 ntBASIC1.91□□□□□ -2.1
RPS4XP62701 AC016957.1-201ENST00000534895 309 ntBASIC1.91□□□□□ -2.1
RPS4XP62701 AC025423.5-201ENST00000550230 219 ntBASIC1.91□□□□□ -2.1
RPS4XP62701 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.91□□□□□ -2.1
RPS4XP62701 TPRKBP2-201ENST00000565969 475 ntBASIC1.91□□□□□ -2.1
RPS4XP62701 RPS3AP23-202ENST00000574601 686 ntBASIC1.91□□□□□ -2.1
RPS4XP62701 AC100830.2-201ENST00000581636 240 ntBASIC1.91□□□□□ -2.1
RPS4XP62701 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.91□□□□□ -2.1
RPS4XP62701 AL031274.2-201ENST00000599419 203 ntBASIC1.91□□□□□ -2.1
RPS4XP62701 AC064836.2-201ENST00000609491 462 ntBASIC1.91□□□□□ -2.1
RPS4XP62701 MIR203B-201ENST00000636080 86 ntBASIC1.91□□□□□ -2.1
RPS4XP62701 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
RPS4XP62701 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.9□□□□□ -2.1
RPS4XP62701 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.1
RPS4XP62701 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
RPS4XP62701 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
RPS4XP62701 Y_RNA.9-201ENST00000362354 101 ntBASIC1.9□□□□□ -2.11
RPS4XP62701 Y_RNA.38-201ENST00000362617 102 ntBASIC1.9□□□□□ -2.11
RPS4XP62701 RNU4-56P-201ENST00000364700 142 ntBASIC1.9□□□□□ -2.11
RPS4XP62701 Y_RNA.402-201ENST00000383972 102 ntBASIC1.9□□□□□ -2.11
RPS4XP62701 SNORA40.19-201ENST00000390846 128 ntBASIC1.9□□□□□ -2.11
RPS4XP62701 HMGN2P39-201ENST00000398005 273 ntBASIC1.9□□□□□ -2.11
RPS4XP62701 MTCYBP2-201ENST00000407745 171 ntBASIC1.9□□□□□ -2.11
RPS4XP62701 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.9□□□□□ -2.11
RPS4XP62701 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.9□□□□□ -2.11
RPS4XP62701 RNU6-717P-201ENST00000459076 104 ntBASIC1.9□□□□□ -2.11
RPS4XP62701 AC008628.2-201ENST00000502605 298 ntBASIC1.9□□□□□ -2.11
RPS4XP62701 Y_RNA.655-201ENST00000515919 96 ntBASIC1.9□□□□□ -2.11
RPS4XP62701 SNORA31.16-201ENST00000516773 139 ntBASIC1.9□□□□□ -2.11
RPS4XP62701 AC015712.3-201ENST00000559380 164 ntBASIC1.9□□□□□ -2.11
RPS4XP62701 AC012557.2-201ENST00000605919 418 ntBASIC1.9□□□□□ -2.11
RPS4XP62701 MIR219B-201ENST00000637023 88 ntBASIC1.9□□□□□ -2.11
RPS4XP62701 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
RPS4XP62701 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms