Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 ZNF886P-201ENST00000450781 723 ntBASIC0.08□□□□□ -2.4
CKS1BP61024 AC007395.1-201ENST00000451333 677 ntBASIC0.08□□□□□ -2.4
CKS1BP61024 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.08□□□□□ -2.4
CKS1BP61024 RNU6-1102P-201ENST00000516149 96 ntBASIC0.08□□□□□ -2.4
CKS1BP61024 RNU6-677P-201ENST00000516914 101 ntBASIC0.08□□□□□ -2.4
CKS1BP61024 RNU6-1223P-201ENST00000517124 104 ntBASIC0.08□□□□□ -2.4
CKS1BP61024 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC0.08□□□□□ -2.4
CKS1BP61024 DEFB131D-201ENST00000526803 184 ntBASIC0.08□□□□□ -2.4
CKS1BP61024 DEFB108A-201ENST00000530110 222 ntBASIC0.08□□□□□ -2.4
CKS1BP61024 MIR4742-201ENST00000581069 85 ntBASIC0.08□□□□□ -2.4
CKS1BP61024 MIR4298-201ENST00000584380 73 ntBASIC0.08□□□□□ -2.4
CKS1BP61024 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC0.08□□□□□ -2.4
CKS1BP61024 AL138726.1-201ENST00000614873 333 ntBASIC0.08□□□□□ -2.4
CKS1BP61024 AC116165.2-201ENST00000616705 206 ntBASIC0.08□□□□□ -2.4
CKS1BP61024 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.07□□□□□ -2.4
CKS1BP61024 BX664727.1-201ENST00000416024 466 ntBASIC0.07□□□□□ -2.4
CKS1BP61024 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.07□□□□□ -2.4
CKS1BP61024 AC002486.1-201ENST00000435098 391 ntBASIC0.07□□□□□ -2.4
CKS1BP61024 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.07□□□□□ -2.4
CKS1BP61024 EEF1E1P1-201ENST00000446998 430 ntBASIC0.07□□□□□ -2.4
CKS1BP61024 NFU1P2-201ENST00000448700 469 ntBASIC0.07□□□□□ -2.4
CKS1BP61024 RPS20P10-201ENST00000451209 253 ntBASIC0.07□□□□□ -2.4
CKS1BP61024 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
CKS1BP61024 AC016925.1-201ENST00000458303 298 ntBASIC0.07□□□□□ -2.4
CKS1BP61024 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC0.07□□□□□ -2.4
CKS1BP61024 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC0.07□□□□□ -2.4
CKS1BP61024 AC104806.1-201ENST00000508720 308 ntBASIC0.07□□□□□ -2.4
CKS1BP61024 RNU6-1041P-201ENST00000516254 102 ntBASIC0.07□□□□□ -2.4
CKS1BP61024 RNU6-922P-201ENST00000516753 99 ntBASIC0.07□□□□□ -2.4
CKS1BP61024 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.07□□□□□ -2.4
CKS1BP61024 AL132657.2-201ENST00000564417 358 ntBASIC0.07□□□□□ -2.4
CKS1BP61024 MIR4711-201ENST00000578274 70 ntBASIC0.07□□□□□ -2.4
CKS1BP61024 AL078603.1-201ENST00000603824 313 ntBASIC0.07□□□□□ -2.4
CKS1BP61024 AL022154.1-201ENST00000604698 785 ntBASIC0.07□□□□□ -2.4
CKS1BP61024 AL034555.1-201ENST00000604816 211 ntBASIC0.07□□□□□ -2.4
CKS1BP61024 AC006270.3-201ENST00000605967 1036 ntBASIC0.07□□□□□ -2.4
CKS1BP61024 Z69720.2-201ENST00000624755 279 ntBASIC0.07□□□□□ -2.4
CKS1BP61024 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
CKS1BP61024 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.06□□□□□ -2.4
CKS1BP61024 RNU1-133P-201ENST00000364867 167 ntBASIC0.06□□□□□ -2.4
CKS1BP61024 SNORD31B-201ENST00000364977 69 ntBASIC0.06□□□□□ -2.4
CKS1BP61024 RNU6-1335P-201ENST00000365426 107 ntBASIC0.06□□□□□ -2.4
CKS1BP61024 MIR10A-201ENST00000385043 110 ntBASIC0.06□□□□□ -2.4
CKS1BP61024 RNU6-278P-201ENST00000390945 109 ntBASIC0.06□□□□□ -2.4
CKS1BP61024 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.06□□□□□ -2.4
CKS1BP61024 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC0.06□□□□□ -2.4
CKS1BP61024 AC010531.2-201ENST00000465012 153 ntBASIC0.06□□□□□ -2.4
CKS1BP61024 HMGN1P12-201ENST00000499125 195 ntBASIC0.06□□□□□ -2.4
CKS1BP61024 AC022447.4-201ENST00000504053 364 ntBASIC0.06□□□□□ -2.4
CKS1BP61024 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.06□□□□□ -2.4
CKS1BP61024 AC027338.1-201ENST00000514840 825 ntBASIC0.06□□□□□ -2.4
CKS1BP61024 RNU6-856P-201ENST00000516959 98 ntBASIC0.06□□□□□ -2.4
CKS1BP61024 AC011979.2-201ENST00000527568 352 ntBASIC0.06□□□□□ -2.4
CKS1BP61024 AL137100.2-201ENST00000555786 315 ntBASIC0.06□□□□□ -2.4
CKS1BP61024 AC099654.8-201ENST00000637757 681 ntBASIC0.06□□□□□ -2.4
CKS1BP61024 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
CKS1BP61024 RNU6-289P-201ENST00000364093 107 ntBASIC0.05□□□□□ -2.4
CKS1BP61024 SNORD89-201ENST00000390981 114 ntBASIC0.05□□□□□ -2.4
CKS1BP61024 MIR936-201ENST00000401264 98 ntBASIC0.05□□□□□ -2.4
CKS1BP61024 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.05□□□□□ -2.4
CKS1BP61024 MIR1295A-201ENST00000408463 79 ntBASIC0.05□□□□□ -2.4
CKS1BP61024 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC0.05□□□□□ -2.4
CKS1BP61024 AL139824.2-201ENST00000458731 1095 ntBASIC0.05□□□□□ -2.4
CKS1BP61024 Y_RNA.687-201ENST00000516558 91 ntBASIC0.05□□□□□ -2.4
CKS1BP61024 MTCO3P15-201ENST00000526563 574 ntBASIC0.05□□□□□ -2.4
CKS1BP61024 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.05□□□□□ -2.4
CKS1BP61024 MIR5708-201ENST00000579723 85 ntBASIC0.05□□□□□ -2.4
CKS1BP61024 AL445435.1-201ENST00000604232 665 ntBASIC0.05□□□□□ -2.4
CKS1BP61024 RPL21P136-201ENST00000605378 396 ntBASIC0.05□□□□□ -2.4
CKS1BP61024 MIR8070-201ENST00000616510 88 ntBASIC0.05□□□□□ -2.4
CKS1BP61024 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC0.05□□□□□ -2.4
CKS1BP61024 RNU6-505P-201ENST00000384427 107 ntBASIC0.04□□□□□ -2.4
CKS1BP61024 RNU6-342P-201ENST00000384521 104 ntBASIC0.04□□□□□ -2.4
CKS1BP61024 RNA5SP299-201ENST00000391203 116 ntBASIC0.04□□□□□ -2.4
CKS1BP61024 RPL22P18-201ENST00000417197 377 ntBASIC0.04□□□□□ -2.4
CKS1BP61024 AC073614.1-201ENST00000438690 650 ntBASIC0.04□□□□□ -2.4
CKS1BP61024 AC007969.2-201ENST00000441891 191 ntBASIC0.04□□□□□ -2.4
CKS1BP61024 TAF9P1-201ENST00000445421 515 ntBASIC0.04□□□□□ -2.4
CKS1BP61024 PAXBP1P1-201ENST00000449315 447 ntBASIC0.04□□□□□ -2.4
CKS1BP61024 TAF9P2-201ENST00000454958 515 ntBASIC0.04□□□□□ -2.4
CKS1BP61024 SRRM1P2-201ENST00000464531 1192 ntBASIC0.04□□□□□ -2.4
CKS1BP61024 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.04□□□□□ -2.4
CKS1BP61024 AC105313.1-201ENST00000509121 353 ntBASIC0.04□□□□□ -2.4
CKS1BP61024 SNORA70.12-201ENST00000516084 153 ntBASIC0.04□□□□□ -2.4
CKS1BP61024 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.04□□□□□ -2.4
CKS1BP61024 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.04□□□□□ -2.4
CKS1BP61024 AC092354.1-201ENST00000606057 376 ntBASIC0.04□□□□□ -2.4
CKS1BP61024 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.04□□□□□ -2.4
CKS1BP61024 AC023158.2-201ENST00000614876 543 ntBASIC0.04□□□□□ -2.4
CKS1BP61024 MTND4P5-201ENST00000435821 1374 ntBASIC0.04□□□□□ -2.4
CKS1BP61024 SNORD116-13-201ENST00000384408 92 ntBASIC0.03□□□□□ -2.4
CKS1BP61024 RPS3AP36-201ENST00000398190 775 ntBASIC0.03□□□□□ -2.4
CKS1BP61024 RPL21P1-201ENST00000399532 476 ntBASIC0.03□□□□□ -2.4
CKS1BP61024 AL359704.1-201ENST00000411586 781 ntBASIC0.03□□□□□ -2.4
CKS1BP61024 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.03□□□□□ -2.4
CKS1BP61024 AC060773.1-201ENST00000421698 310 ntBASIC0.03□□□□□ -2.4
CKS1BP61024 U7.7-201ENST00000459276 60 ntBASIC0.03□□□□□ -2.4
CKS1BP61024 AL049830.1-201ENST00000468034 425 ntBASIC0.03□□□□□ -2.4
CKS1BP61024 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0.03□□□□□ -2.4
CKS1BP61024 AC121161.1-201ENST00000510606 652 ntBASIC0.03□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms