Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 MED13P1-201ENST00000428342 171 ntBASIC0.55□□□□□ -2.32
HIST1H2BDP58876 RPL37P21-201ENST00000435890 276 ntBASIC0.55□□□□□ -2.32
HIST1H2BDP58876 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.55□□□□□ -2.32
HIST1H2BDP58876 MTCO2P29-201ENST00000465212 189 ntBASIC0.55□□□□□ -2.32
HIST1H2BDP58876 RPL39P38-201ENST00000467018 153 ntBASIC0.55□□□□□ -2.32
HIST1H2BDP58876 AC087343.1-201ENST00000477341 475 ntBASIC0.55□□□□□ -2.32
HIST1H2BDP58876 AC010587.1-201ENST00000505809 469 ntBASIC0.55□□□□□ -2.32
HIST1H2BDP58876 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.55□□□□□ -2.32
HIST1H2BDP58876 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.55□□□□□ -2.32
HIST1H2BDP58876 HSPE1P23-201ENST00000509838 286 ntBASIC0.55□□□□□ -2.32
HIST1H2BDP58876 AC067942.3-201ENST00000512025 362 ntBASIC0.55□□□□□ -2.32
HIST1H2BDP58876 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
HIST1H2BDP58876 RNA5SP168-201ENST00000516642 112 ntBASIC0.55□□□□□ -2.32
HIST1H2BDP58876 RNU6-685P-201ENST00000517088 95 ntBASIC0.55□□□□□ -2.32
HIST1H2BDP58876 AC136628.3-201ENST00000521868 290 ntBASIC0.55□□□□□ -2.32
HIST1H2BDP58876 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.55□□□□□ -2.32
HIST1H2BDP58876 AP001004.1-201ENST00000582468 324 ntBASIC0.55□□□□□ -2.32
HIST1H2BDP58876 MTCO2P2-201ENST00000591258 225 ntBASIC0.55□□□□□ -2.32
HIST1H2BDP58876 AC011494.1-201ENST00000596454 237 ntBASIC0.55□□□□□ -2.32
HIST1H2BDP58876 AC105129.3-201ENST00000605455 485 ntBASIC0.55□□□□□ -2.32
HIST1H2BDP58876 RNU6-6P-201ENST00000606623 107 ntBASIC0.55□□□□□ -2.32
HIST1H2BDP58876 AL590808.1-201ENST00000618696 141 ntBASIC0.55□□□□□ -2.32
HIST1H2BDP58876 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.55□□□□□ -2.32
HIST1H2BDP58876 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.54□□□□□ -2.32
HIST1H2BDP58876 RNU4-79P-201ENST00000362764 141 ntBASIC0.54□□□□□ -2.32
HIST1H2BDP58876 RNU6-336P-201ENST00000364891 107 ntBASIC0.54□□□□□ -2.32
HIST1H2BDP58876 RNU6-641P-201ENST00000384006 107 ntBASIC0.54□□□□□ -2.32
HIST1H2BDP58876 RNU6-418P-201ENST00000384035 107 ntBASIC0.54□□□□□ -2.32
HIST1H2BDP58876 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
HIST1H2BDP58876 RNU6-1242P-201ENST00000391052 103 ntBASIC0.54□□□□□ -2.32
HIST1H2BDP58876 SNORD115.1-201ENST00000391109 76 ntBASIC0.54□□□□□ -2.32
HIST1H2BDP58876 RNU6-733P-201ENST00000410759 104 ntBASIC0.54□□□□□ -2.32
HIST1H2BDP58876 AC063976.4-201ENST00000421971 163 ntBASIC0.54□□□□□ -2.32
HIST1H2BDP58876 AC002429.1-201ENST00000437672 148 ntBASIC0.54□□□□□ -2.32
HIST1H2BDP58876 GTF2IP13-201ENST00000438487 386 ntBASIC0.54□□□□□ -2.32
HIST1H2BDP58876 RPS24P1-201ENST00000438550 371 ntBASIC0.54□□□□□ -2.32
HIST1H2BDP58876 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.54□□□□□ -2.32
HIST1H2BDP58876 C1DP4-201ENST00000455429 424 ntBASIC0.54□□□□□ -2.32
HIST1H2BDP58876 RPS23P5-201ENST00000495419 428 ntBASIC0.54□□□□□ -2.32
HIST1H2BDP58876 AC091435.1-201ENST00000505442 584 ntBASIC0.54□□□□□ -2.32
HIST1H2BDP58876 PDCD5P2-201ENST00000507570 312 ntBASIC0.54□□□□□ -2.32
HIST1H2BDP58876 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.54□□□□□ -2.32
HIST1H2BDP58876 SNORA31.2-201ENST00000516019 134 ntBASIC0.54□□□□□ -2.32
HIST1H2BDP58876 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.54□□□□□ -2.32
HIST1H2BDP58876 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
HIST1H2BDP58876 MIR4429-201ENST00000580105 73 ntBASIC0.54□□□□□ -2.32
HIST1H2BDP58876 RPL17P51-201ENST00000605218 238 ntBASIC0.54□□□□□ -2.32
HIST1H2BDP58876 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC0.54□□□□□ -2.32
HIST1H2BDP58876 AL139418.1-201ENST00000613613 177 ntBASIC0.54□□□□□ -2.32
HIST1H2BDP58876 AC019226.2-201ENST00000625973 424 ntBASIC0.54□□□□□ -2.32
HIST1H2BDP58876 MIR6866-201ENST00000638146 69 ntBASIC0.54□□□□□ -2.32
HIST1H2BDP58876 Y_RNA.22-201ENST00000362492 102 ntBASIC0.53□□□□□ -2.32
HIST1H2BDP58876 SNORD114-1-201ENST00000362705 72 ntBASIC0.53□□□□□ -2.32
HIST1H2BDP58876 RNU6-428P-201ENST00000362942 107 ntBASIC0.53□□□□□ -2.32
HIST1H2BDP58876 Y_RNA.124-201ENST00000363339 93 ntBASIC0.53□□□□□ -2.32
HIST1H2BDP58876 SNORA33-201ENST00000363664 130 ntBASIC0.53□□□□□ -2.32
HIST1H2BDP58876 Y_RNA.324-201ENST00000365165 102 ntBASIC0.53□□□□□ -2.32
HIST1H2BDP58876 RNU4-26P-201ENST00000410270 107 ntBASIC0.53□□□□□ -2.32
HIST1H2BDP58876 MTCO2P21-201ENST00000419780 677 ntBASIC0.53□□□□□ -2.32
HIST1H2BDP58876 AC119618.1-201ENST00000434191 222 ntBASIC0.53□□□□□ -2.32
HIST1H2BDP58876 USP9YP25-201ENST00000457708 443 ntBASIC0.53□□□□□ -2.32
HIST1H2BDP58876 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.53□□□□□ -2.32
HIST1H2BDP58876 HMGN1P12-201ENST00000499125 195 ntBASIC0.53□□□□□ -2.32
HIST1H2BDP58876 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.53□□□□□ -2.32
HIST1H2BDP58876 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.53□□□□□ -2.32
HIST1H2BDP58876 AC108043.1-201ENST00000512696 574 ntBASIC0.53□□□□□ -2.32
HIST1H2BDP58876 RNU6-322P-201ENST00000516010 103 ntBASIC0.53□□□□□ -2.32
HIST1H2BDP58876 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC0.53□□□□□ -2.32
HIST1H2BDP58876 MTND4LP18-201ENST00000526864 291 ntBASIC0.53□□□□□ -2.32
HIST1H2BDP58876 AP003181.2-201ENST00000528941 181 ntBASIC0.53□□□□□ -2.32
HIST1H2BDP58876 YWHAZP1-201ENST00000556286 722 ntBASIC0.53□□□□□ -2.32
HIST1H2BDP58876 AC069431.2-201ENST00000604149 1099 ntBASIC0.53□□□□□ -2.32
HIST1H2BDP58876 AC064872.1-201ENST00000604823 1072 ntBASIC0.53□□□□□ -2.32
HIST1H2BDP58876 AC004777.1-201ENST00000624317 287 ntBASIC0.53□□□□□ -2.32
HIST1H2BDP58876 BX322639.1-202ENST00000423987 2213 ntBASIC0.53□□□□□ -2.33
HIST1H2BDP58876 RNU6-545P-201ENST00000362681 104 ntBASIC0.52□□□□□ -2.33
HIST1H2BDP58876 RNU6-45P-201ENST00000384471 107 ntBASIC0.52□□□□□ -2.33
HIST1H2BDP58876 AC011233.1-201ENST00000422812 283 ntBASIC0.52□□□□□ -2.33
HIST1H2BDP58876 RPS27AP14-201ENST00000422868 454 ntBASIC0.52□□□□□ -2.33
HIST1H2BDP58876 AL133396.1-201ENST00000432048 687 ntBASIC0.52□□□□□ -2.33
HIST1H2BDP58876 USP9YP28-201ENST00000435142 589 ntBASIC0.52□□□□□ -2.33
HIST1H2BDP58876 GAPDHP17-201ENST00000449858 1001 ntBASIC0.52□□□□□ -2.33
HIST1H2BDP58876 AC048334.1-201ENST00000477975 159 ntBASIC0.52□□□□□ -2.33
HIST1H2BDP58876 AC112204.1-201ENST00000502591 103 ntBASIC0.52□□□□□ -2.33
HIST1H2BDP58876 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.52□□□□□ -2.33
HIST1H2BDP58876 SNORA31.4-201ENST00000516049 129 ntBASIC0.52□□□□□ -2.33
HIST1H2BDP58876 RNU6-295P-201ENST00000516901 104 ntBASIC0.52□□□□□ -2.33
HIST1H2BDP58876 CBX3P8-201ENST00000532412 525 ntBASIC0.52□□□□□ -2.33
HIST1H2BDP58876 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC0.52□□□□□ -2.33
HIST1H2BDP58876 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.52□□□□□ -2.33
HIST1H2BDP58876 TPRKBP2-201ENST00000565969 475 ntBASIC0.52□□□□□ -2.33
HIST1H2BDP58876 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC0.52□□□□□ -2.33
HIST1H2BDP58876 AC090517.1-201ENST00000569307 266 ntBASIC0.52□□□□□ -2.33
HIST1H2BDP58876 MIR3944-201ENST00000581277 108 ntBASIC0.52□□□□□ -2.33
HIST1H2BDP58876 AC022432.1-201ENST00000595739 310 ntBASIC0.52□□□□□ -2.33
HIST1H2BDP58876 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC0.52□□□□□ -2.33
HIST1H2BDP58876 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.52□□□□□ -2.33
HIST1H2BDP58876 AC021506.2-201ENST00000612354 169 ntBASIC0.52□□□□□ -2.33
HIST1H2BDP58876 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.52□□□□□ -2.33
HIST1H2BDP58876 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms