Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 MIR514A3-201ENST00000385132 88 ntBASIC2.07□□□□□ -2.08
RIPK4P57078 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
RIPK4P57078 FGF7P8-201ENST00000402994 292 ntBASIC2.07□□□□□ -2.08
RIPK4P57078 RNU2-29P-201ENST00000410423 189 ntBASIC2.07□□□□□ -2.08
RIPK4P57078 Y_RNA.604-201ENST00000410574 102 ntBASIC2.07□□□□□ -2.08
RIPK4P57078 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.07□□□□□ -2.08
RIPK4P57078 AL160275.3-201ENST00000423876 471 ntBASIC2.07□□□□□ -2.08
RIPK4P57078 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.07□□□□□ -2.08
RIPK4P57078 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.07□□□□□ -2.08
RIPK4P57078 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.07□□□□□ -2.08
RIPK4P57078 BTF3P15-201ENST00000455606 336 ntBASIC2.07□□□□□ -2.08
RIPK4P57078 AP001324.2-201ENST00000461163 319 ntBASIC2.07□□□□□ -2.08
RIPK4P57078 AC117503.1-201ENST00000472241 394 ntBASIC2.07□□□□□ -2.08
RIPK4P57078 RPL7P43-201ENST00000478876 753 ntBASIC2.07□□□□□ -2.08
RIPK4P57078 CKS1BP2-201ENST00000497342 240 ntBASIC2.07□□□□□ -2.08
RIPK4P57078 AC112206.3-201ENST00000514578 389 ntBASIC2.07□□□□□ -2.08
RIPK4P57078 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.07□□□□□ -2.08
RIPK4P57078 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.07□□□□□ -2.08
RIPK4P57078 AF235103.2-201ENST00000525753 346 ntBASIC2.07□□□□□ -2.08
RIPK4P57078 AC023050.3-201ENST00000541142 333 ntBASIC2.07□□□□□ -2.08
RIPK4P57078 AC079598.5-201ENST00000547460 117 ntBASIC2.07□□□□□ -2.08
RIPK4P57078 ADI1P3-201ENST00000549509 470 ntBASIC2.07□□□□□ -2.08
RIPK4P57078 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.07□□□□□ -2.08
RIPK4P57078 RNU6-89P-201ENST00000606519 100 ntBASIC2.07□□□□□ -2.08
RIPK4P57078 DISC2.1-201ENST00000612827 205 ntBASIC2.07□□□□□ -2.08
RIPK4P57078 U6.114-201ENST00000636407 96 ntBASIC2.07□□□□□ -2.08
RIPK4P57078 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
RIPK4P57078 OR4G1P-203ENST00000641984 1631 ntBASIC2.06□□□□□ -2.08
RIPK4P57078 Y_RNA.86-201ENST00000363020 111 ntBASIC2.06□□□□□ -2.08
RIPK4P57078 RNU6-522P-201ENST00000364497 107 ntBASIC2.06□□□□□ -2.08
RIPK4P57078 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
RIPK4P57078 MIR578-201ENST00000384828 96 ntBASIC2.06□□□□□ -2.08
RIPK4P57078 MIR218-1-201ENST00000384999 110 ntBASIC2.06□□□□□ -2.08
RIPK4P57078 SNORA16.2-201ENST00000390991 127 ntBASIC2.06□□□□□ -2.08
RIPK4P57078 AL353621.1-201ENST00000418219 243 ntBASIC2.06□□□□□ -2.08
RIPK4P57078 SNRPEP10-201ENST00000420249 274 ntBASIC2.06□□□□□ -2.08
RIPK4P57078 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.06□□□□□ -2.08
RIPK4P57078 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.06□□□□□ -2.08
RIPK4P57078 MTCO2P3-201ENST00000442543 421 ntBASIC2.06□□□□□ -2.08
RIPK4P57078 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.06□□□□□ -2.08
RIPK4P57078 AL441985.1-201ENST00000457727 251 ntBASIC2.06□□□□□ -2.08
RIPK4P57078 SCARNA18-201ENST00000459004 134 ntBASIC2.06□□□□□ -2.08
RIPK4P57078 RPL22P13-201ENST00000493291 347 ntBASIC2.06□□□□□ -2.08
RIPK4P57078 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.06□□□□□ -2.08
RIPK4P57078 AC018710.1-201ENST00000506509 158 ntBASIC2.06□□□□□ -2.08
RIPK4P57078 PRDX4P1-201ENST00000507189 574 ntBASIC2.06□□□□□ -2.08
RIPK4P57078 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.06□□□□□ -2.08
RIPK4P57078 GNAI2P1-201ENST00000541815 315 ntBASIC2.06□□□□□ -2.08
RIPK4P57078 AC060780.3-201ENST00000589464 80 ntBASIC2.06□□□□□ -2.08
RIPK4P57078 AL138889.2-201ENST00000603883 242 ntBASIC2.06□□□□□ -2.08
RIPK4P57078 AL645939.4-201ENST00000604495 135 ntBASIC2.06□□□□□ -2.08
RIPK4P57078 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.06□□□□□ -2.08
RIPK4P57078 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.06□□□□□ -2.08
RIPK4P57078 AC090617.10-201ENST00000624308 134 ntBASIC2.06□□□□□ -2.08
RIPK4P57078 MIR412-201ENST00000362142 91 ntBASIC2.05□□□□□ -2.08
RIPK4P57078 RNU4-66P-201ENST00000365199 138 ntBASIC2.05□□□□□ -2.08
RIPK4P57078 RNU6-715P-201ENST00000365204 103 ntBASIC2.05□□□□□ -2.08
RIPK4P57078 Y_RNA.573-201ENST00000384763 105 ntBASIC2.05□□□□□ -2.08
RIPK4P57078 SNORA67.5-201ENST00000391036 107 ntBASIC2.05□□□□□ -2.08
RIPK4P57078 RNU6-876P-201ENST00000391295 104 ntBASIC2.05□□□□□ -2.08
RIPK4P57078 RNA5SP111-201ENST00000411386 101 ntBASIC2.05□□□□□ -2.08
RIPK4P57078 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.05□□□□□ -2.08
RIPK4P57078 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.05□□□□□ -2.08
RIPK4P57078 AC108667.1-201ENST00000428618 249 ntBASIC2.05□□□□□ -2.08
RIPK4P57078 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.05□□□□□ -2.08
RIPK4P57078 AL360271.2-201ENST00000447710 161 ntBASIC2.05□□□□□ -2.08
RIPK4P57078 AMD1P1-201ENST00000457220 922 ntBASIC2.05□□□□□ -2.08
RIPK4P57078 RPL31P58-201ENST00000469001 379 ntBASIC2.05□□□□□ -2.08
RIPK4P57078 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.05□□□□□ -2.08
RIPK4P57078 RNU6-507P-201ENST00000516045 100 ntBASIC2.05□□□□□ -2.08
RIPK4P57078 RNU6-1178P-201ENST00000516674 107 ntBASIC2.05□□□□□ -2.08
RIPK4P57078 SNORA20.3-201ENST00000516880 132 ntBASIC2.05□□□□□ -2.08
RIPK4P57078 SNORD60.2-201ENST00000516883 86 ntBASIC2.05□□□□□ -2.08
RIPK4P57078 MIR548S-201ENST00000581352 82 ntBASIC2.05□□□□□ -2.08
RIPK4P57078 AC073539.2-201ENST00000597113 165 ntBASIC2.05□□□□□ -2.08
RIPK4P57078 CTHRC1P1-201ENST00000605383 469 ntBASIC2.05□□□□□ -2.08
RIPK4P57078 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.05□□□□□ -2.08
RIPK4P57078 AC006504.8-201ENST00000621046 635 ntBASIC2.05□□□□□ -2.08
RIPK4P57078 AP003400.5-201ENST00000624827 617 ntBASIC2.05□□□□□ -2.08
RIPK4P57078 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
RIPK4P57078 SNORD3E-201ENST00000362899 217 ntBASIC2.04□□□□□ -2.08
RIPK4P57078 SNORA72.1-201ENST00000363485 129 ntBASIC2.04□□□□□ -2.08
RIPK4P57078 RNU6-1303P-201ENST00000364841 107 ntBASIC2.04□□□□□ -2.08
RIPK4P57078 U8.10-201ENST00000384260 133 ntBASIC2.04□□□□□ -2.08
RIPK4P57078 SNORD70.1-201ENST00000391007 85 ntBASIC2.04□□□□□ -2.08
RIPK4P57078 AL356776.1-201ENST00000406574 447 ntBASIC2.04□□□□□ -2.08
RIPK4P57078 AL606923.1-201ENST00000406616 190 ntBASIC2.04□□□□□ -2.08
RIPK4P57078 MIR1323-201ENST00000408090 73 ntBASIC2.04□□□□□ -2.08
RIPK4P57078 Y_RNA.623-201ENST00000411128 95 ntBASIC2.04□□□□□ -2.08
RIPK4P57078 RNU6-387P-201ENST00000411331 105 ntBASIC2.04□□□□□ -2.08
RIPK4P57078 SNORD56-201ENST00000413522 71 ntBASIC2.04□□□□□ -2.08
RIPK4P57078 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.04□□□□□ -2.08
RIPK4P57078 AL627311.1-201ENST00000431514 115 ntBASIC2.04□□□□□ -2.08
RIPK4P57078 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.04□□□□□ -2.08
RIPK4P57078 SNRPFP3-201ENST00000457792 225 ntBASIC2.04□□□□□ -2.08
RIPK4P57078 HMGN2P26-201ENST00000463169 339 ntBASIC2.04□□□□□ -2.08
RIPK4P57078 DYNLL1P5-201ENST00000467158 270 ntBASIC2.04□□□□□ -2.08
RIPK4P57078 AC087884.1-201ENST00000469738 328 ntBASIC2.04□□□□□ -2.08
RIPK4P57078 AC083904.1-201ENST00000487828 231 ntBASIC2.04□□□□□ -2.08
RIPK4P57078 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms