Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 MTND3P23-201ENST00000431980 347 ntBASIC2.43□□□□□ -2.02
CLDN20P56880 AC236972.1-201ENST00000433225 199 ntBASIC2.43□□□□□ -2.02
CLDN20P56880 AC236972.2-201ENST00000434979 310 ntBASIC2.43□□□□□ -2.02
CLDN20P56880 AC244670.1-201ENST00000436879 112 ntBASIC2.43□□□□□ -2.02
CLDN20P56880 AC104564.1-201ENST00000493028 407 ntBASIC2.43□□□□□ -2.02
CLDN20P56880 AC016632.1-201ENST00000503994 196 ntBASIC2.43□□□□□ -2.02
CLDN20P56880 AC091874.1-201ENST00000511402 339 ntBASIC2.43□□□□□ -2.02
CLDN20P56880 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.43□□□□□ -2.02
CLDN20P56880 AC026241.1-201ENST00000517873 2142 ntBASIC2.43□□□□□ -2.02
CLDN20P56880 APOOP3-201ENST00000536787 586 ntBASIC2.43□□□□□ -2.02
CLDN20P56880 AC016256.1-201ENST00000547971 354 ntBASIC2.43□□□□□ -2.02
CLDN20P56880 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.43□□□□□ -2.02
CLDN20P56880 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.43□□□□□ -2.02
CLDN20P56880 MIR5690-201ENST00000583739 73 ntBASIC2.43□□□□□ -2.02
CLDN20P56880 MIR3616-201ENST00000584070 92 ntBASIC2.43□□□□□ -2.02
CLDN20P56880 AC009229.3-201ENST00000608056 282 ntBASIC2.43□□□□□ -2.02
CLDN20P56880 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.43□□□□□ -2.02
CLDN20P56880 MAPK10-266ENST00000641066 6555 ntBASIC2.43□□□□□ -2.02
CLDN20P56880 AC080128.1-201ENST00000474389 1917 ntBASIC2.42□□□□□ -2.02
CLDN20P56880 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.42□□□□□ -2.02
CLDN20P56880 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
CLDN20P56880 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
CLDN20P56880 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CLDN20P56880 AC062016.1-201ENST00000355719 319 ntBASIC2.42□□□□□ -2.02
CLDN20P56880 Y_RNA.40-201ENST00000362645 93 ntBASIC2.42□□□□□ -2.02
CLDN20P56880 RNU6-655P-201ENST00000362858 107 ntBASIC2.42□□□□□ -2.02
CLDN20P56880 RNU6-1210P-201ENST00000363775 107 ntBASIC2.42□□□□□ -2.02
CLDN20P56880 U3.13-201ENST00000364804 214 ntBASIC2.42□□□□□ -2.02
CLDN20P56880 RNU6-142P-201ENST00000384019 107 ntBASIC2.42□□□□□ -2.02
CLDN20P56880 SNORA75.4-201ENST00000391278 119 ntBASIC2.42□□□□□ -2.02
CLDN20P56880 MTCYBP4-201ENST00000401524 249 ntBASIC2.42□□□□□ -2.02
CLDN20P56880 AL356057.3-201ENST00000402607 340 ntBASIC2.42□□□□□ -2.02
CLDN20P56880 RNA5SP184-201ENST00000411071 108 ntBASIC2.42□□□□□ -2.02
CLDN20P56880 AIMP1P2-201ENST00000425294 312 ntBASIC2.42□□□□□ -2.02
CLDN20P56880 AC063976.3-201ENST00000426849 329 ntBASIC2.42□□□□□ -2.02
CLDN20P56880 RPL30P4-201ENST00000429309 333 ntBASIC2.42□□□□□ -2.02
CLDN20P56880 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.42□□□□□ -2.02
CLDN20P56880 CR769767.1-201ENST00000436337 346 ntBASIC2.42□□□□□ -2.02
CLDN20P56880 RPL30P1-201ENST00000488676 339 ntBASIC2.42□□□□□ -2.02
CLDN20P56880 AC022447.4-201ENST00000504053 364 ntBASIC2.42□□□□□ -2.02
CLDN20P56880 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.42□□□□□ -2.02
CLDN20P56880 AC008549.1-201ENST00000512900 643 ntBASIC2.42□□□□□ -2.02
CLDN20P56880 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.42□□□□□ -2.02
CLDN20P56880 RNU2-53P-201ENST00000516257 147 ntBASIC2.42□□□□□ -2.02
CLDN20P56880 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.42□□□□□ -2.02
CLDN20P56880 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.42□□□□□ -2.02
CLDN20P56880 AC027176.1-201ENST00000560204 514 ntBASIC2.42□□□□□ -2.02
CLDN20P56880 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.42□□□□□ -2.02
CLDN20P56880 MIR3199-1-201ENST00000582434 88 ntBASIC2.42□□□□□ -2.02
CLDN20P56880 MIR4273-201ENST00000582824 84 ntBASIC2.42□□□□□ -2.02
CLDN20P56880 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.42□□□□□ -2.02
CLDN20P56880 AL669831.3-213ENST00000636676 183 ntBASIC2.42□□□□□ -2.02
CLDN20P56880 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
CLDN20P56880 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.42□□□□□ -2.02
CLDN20P56880 RNU6-859P-201ENST00000362728 107 ntBASIC2.41□□□□□ -2.02
CLDN20P56880 SNORD50.1-201ENST00000362987 71 ntBASIC2.41□□□□□ -2.02
CLDN20P56880 RNU6-461P-201ENST00000364195 107 ntBASIC2.41□□□□□ -2.02
CLDN20P56880 Y_RNA.259-201ENST00000364619 101 ntBASIC2.41□□□□□ -2.02
CLDN20P56880 Y_RNA.473-201ENST00000384333 102 ntBASIC2.41□□□□□ -2.02
CLDN20P56880 Y_RNA.504-201ENST00000384481 104 ntBASIC2.41□□□□□ -2.02
CLDN20P56880 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
CLDN20P56880 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
CLDN20P56880 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.41□□□□□ -2.02
CLDN20P56880 MTCO2P27-201ENST00000420740 428 ntBASIC2.41□□□□□ -2.02
CLDN20P56880 AC008267.5-201ENST00000424928 265 ntBASIC2.41□□□□□ -2.02
CLDN20P56880 USMG5P1-201ENST00000425964 177 ntBASIC2.41□□□□□ -2.02
CLDN20P56880 ARL5AP4-201ENST00000430731 512 ntBASIC2.41□□□□□ -2.02
CLDN20P56880 AL109933.2-201ENST00000452651 260 ntBASIC2.41□□□□□ -2.02
CLDN20P56880 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.41□□□□□ -2.02
CLDN20P56880 SNORD19B-201ENST00000459623 84 ntBASIC2.41□□□□□ -2.02
CLDN20P56880 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.41□□□□□ -2.02
CLDN20P56880 AL121594.1-201ENST00000475906 575 ntBASIC2.41□□□□□ -2.02
CLDN20P56880 RPL7P42-201ENST00000481005 679 ntBASIC2.41□□□□□ -2.02
CLDN20P56880 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.41□□□□□ -2.02
CLDN20P56880 AIG1P1-201ENST00000503376 148 ntBASIC2.41□□□□□ -2.02
CLDN20P56880 RNU5F-2P-201ENST00000516066 82 ntBASIC2.41□□□□□ -2.02
CLDN20P56880 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.41□□□□□ -2.02
CLDN20P56880 RNU6-307P-201ENST00000516743 106 ntBASIC2.41□□□□□ -2.02
CLDN20P56880 RNA5SP402-201ENST00000517148 110 ntBASIC2.41□□□□□ -2.02
CLDN20P56880 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.41□□□□□ -2.02
CLDN20P56880 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.41□□□□□ -2.02
CLDN20P56880 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.41□□□□□ -2.02
CLDN20P56880 AC007375.1-201ENST00000554513 578 ntBASIC2.41□□□□□ -2.02
CLDN20P56880 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.41□□□□□ -2.02
CLDN20P56880 MIR3136-201ENST00000583498 78 ntBASIC2.41□□□□□ -2.02
CLDN20P56880 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.41□□□□□ -2.02
CLDN20P56880 MIR6852-201ENST00000621699 66 ntBASIC2.41□□□□□ -2.02
CLDN20P56880 SNORA43.4-201ENST00000629559 138 ntBASIC2.41□□□□□ -2.02
CLDN20P56880 MTND5P9-201ENST00000503854 1755 ntBASIC2.41□□□□□ -2.02
CLDN20P56880 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.4□□□□□ -2.02
CLDN20P56880 MTND4P27-201ENST00000450813 1354 ntBASIC2.4□□□□□ -2.02
CLDN20P56880 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CLDN20P56880 Y_RNA.2-201ENST00000362330 96 ntBASIC2.4□□□□□ -2.03
CLDN20P56880 Y_RNA.58-201ENST00000362807 102 ntBASIC2.4□□□□□ -2.03
CLDN20P56880 Y_RNA.154-201ENST00000363624 102 ntBASIC2.4□□□□□ -2.03
CLDN20P56880 RNY3P1-201ENST00000365085 102 ntBASIC2.4□□□□□ -2.03
CLDN20P56880 RNY3-201ENST00000365484 102 ntBASIC2.4□□□□□ -2.03
CLDN20P56880 SET-203ENST00000372688 801 ntTSL 2 BASIC2.4□□□□□ -2.03
CLDN20P56880 RNU1-109P-201ENST00000383960 147 ntBASIC2.4□□□□□ -2.03
CLDN20P56880 Y_RNA.490-201ENST00000384413 102 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms