Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 MIR6078-201ENST00000611069 100 ntBASIC0.82□□□□□ -2.28
CLDN12P56749 AC004808.1-201ENST00000627671 721 ntBASIC0.82□□□□□ -2.28
CLDN12P56749 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC0.82□□□□□ -2.28
CLDN12P56749 AC092268.1-201ENST00000342691 405 ntBASIC0.81□□□□□ -2.28
CLDN12P56749 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
CLDN12P56749 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.81□□□□□ -2.28
CLDN12P56749 RNA5SP111-201ENST00000411386 101 ntBASIC0.81□□□□□ -2.28
CLDN12P56749 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.81□□□□□ -2.28
CLDN12P56749 AC119618.1-201ENST00000434191 222 ntBASIC0.81□□□□□ -2.28
CLDN12P56749 AC007547.1-201ENST00000462177 490 ntBASIC0.81□□□□□ -2.28
CLDN12P56749 TOMM22P6-201ENST00000465035 409 ntBASIC0.81□□□□□ -2.28
CLDN12P56749 AC087343.1-201ENST00000477341 475 ntBASIC0.81□□□□□ -2.28
CLDN12P56749 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.81□□□□□ -2.28
CLDN12P56749 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.81□□□□□ -2.28
CLDN12P56749 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC0.81□□□□□ -2.28
CLDN12P56749 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.81□□□□□ -2.28
CLDN12P56749 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC0.81□□□□□ -2.28
CLDN12P56749 AC110760.3-201ENST00000598794 467 ntBASIC0.81□□□□□ -2.28
CLDN12P56749 AC012507.3-201ENST00000603556 477 ntBASIC0.81□□□□□ -2.28
CLDN12P56749 AC107304.1-201ENST00000604229 296 ntBASIC0.81□□□□□ -2.28
CLDN12P56749 snoU13.31-201ENST00000607291 104 ntBASIC0.81□□□□□ -2.28
CLDN12P56749 AL365434.2-201ENST00000607979 234 ntBASIC0.81□□□□□ -2.28
CLDN12P56749 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.81□□□□□ -2.28
CLDN12P56749 AL138960.2-201ENST00000625145 535 ntBASIC0.81□□□□□ -2.28
CLDN12P56749 AC006927.4-201ENST00000639187 543 ntBASIC0.81□□□□□ -2.28
CLDN12P56749 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.81□□□□□ -2.28
CLDN12P56749 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
CLDN12P56749 RNU6-1123P-201ENST00000362347 106 ntBASIC0.8□□□□□ -2.28
CLDN12P56749 RNA5SP432-201ENST00000362480 116 ntBASIC0.8□□□□□ -2.28
CLDN12P56749 U3.4-201ENST00000363352 213 ntBASIC0.8□□□□□ -2.28
CLDN12P56749 RNU4-1-201ENST00000363925 141 ntBASIC0.8□□□□□ -2.28
CLDN12P56749 SNORA72.2-201ENST00000365028 127 ntBASIC0.8□□□□□ -2.28
CLDN12P56749 RNU1-36P-201ENST00000365130 165 ntBASIC0.8□□□□□ -2.28
CLDN12P56749 RNU6-157P-201ENST00000383957 107 ntBASIC0.8□□□□□ -2.28
CLDN12P56749 RNU6-43P-201ENST00000384302 107 ntBASIC0.8□□□□□ -2.28
CLDN12P56749 RNU6-636P-201ENST00000384598 107 ntBASIC0.8□□□□□ -2.28
CLDN12P56749 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
CLDN12P56749 AL117342.1-201ENST00000404861 406 ntBASIC0.8□□□□□ -2.28
CLDN12P56749 COX6CP10-201ENST00000416832 224 ntBASIC0.8□□□□□ -2.28
CLDN12P56749 SNRPEP10-201ENST00000420249 274 ntBASIC0.8□□□□□ -2.28
CLDN12P56749 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
CLDN12P56749 Z82205.1-201ENST00000428456 297 ntBASIC0.8□□□□□ -2.28
CLDN12P56749 AC084290.1-201ENST00000434995 374 ntBASIC0.8□□□□□ -2.28
CLDN12P56749 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.8□□□□□ -2.28
CLDN12P56749 AC112206.4-201ENST00000515142 405 ntBASIC0.8□□□□□ -2.28
CLDN12P56749 RNU6-377P-201ENST00000515965 102 ntBASIC0.8□□□□□ -2.28
CLDN12P56749 RNU6-856P-201ENST00000516959 98 ntBASIC0.8□□□□□ -2.28
CLDN12P56749 RNA5SP503-201ENST00000517047 117 ntBASIC0.8□□□□□ -2.28
CLDN12P56749 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.8□□□□□ -2.28
CLDN12P56749 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.8□□□□□ -2.28
CLDN12P56749 ZNF519P3-201ENST00000557158 1032 ntBASIC0.8□□□□□ -2.28
CLDN12P56749 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.8□□□□□ -2.28
CLDN12P56749 AP005136.1-201ENST00000579765 429 ntBASIC0.8□□□□□ -2.28
CLDN12P56749 AC008945.2-201ENST00000606056 604 ntBASIC0.8□□□□□ -2.28
CLDN12P56749 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.8□□□□□ -2.28
CLDN12P56749 AC040896.1-201ENST00000613819 479 ntBASIC0.8□□□□□ -2.28
CLDN12P56749 Y_RNA.18-201ENST00000362461 102 ntBASIC0.79□□□□□ -2.28
CLDN12P56749 RNU1-76P-201ENST00000362903 159 ntBASIC0.79□□□□□ -2.28
CLDN12P56749 Y_RNA.327-201ENST00000365201 102 ntBASIC0.79□□□□□ -2.28
CLDN12P56749 RNU6-61P-201ENST00000365528 109 ntBASIC0.79□□□□□ -2.28
CLDN12P56749 SNORA12.2-201ENST00000391040 156 ntBASIC0.79□□□□□ -2.28
CLDN12P56749 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.79□□□□□ -2.28
CLDN12P56749 CYCSP33-201ENST00000414485 327 ntBASIC0.79□□□□□ -2.28
CLDN12P56749 HIGD1AP15-201ENST00000416198 280 ntBASIC0.79□□□□□ -2.28
CLDN12P56749 C1DP2-201ENST00000418167 426 ntBASIC0.79□□□□□ -2.28
CLDN12P56749 AL590135.1-201ENST00000422215 156 ntBASIC0.79□□□□□ -2.28
CLDN12P56749 AC019205.3-201ENST00000424573 156 ntBASIC0.79□□□□□ -2.28
CLDN12P56749 AC010975.2-201ENST00000427781 588 ntBASIC0.79□□□□□ -2.28
CLDN12P56749 AL603825.1-201ENST00000438481 80 ntBASIC0.79□□□□□ -2.28
CLDN12P56749 PRPS1P1-201ENST00000445305 876 ntBASIC0.79□□□□□ -2.28
CLDN12P56749 AC016700.2-201ENST00000446011 156 ntBASIC0.79□□□□□ -2.28
CLDN12P56749 AC010531.2-201ENST00000465012 153 ntBASIC0.79□□□□□ -2.28
CLDN12P56749 RPS26P45-201ENST00000471748 340 ntBASIC0.79□□□□□ -2.28
CLDN12P56749 AC015911.1-201ENST00000495111 156 ntBASIC0.79□□□□□ -2.28
CLDN12P56749 AC034244.1-201ENST00000507687 207 ntBASIC0.79□□□□□ -2.28
CLDN12P56749 AC074344.1-201ENST00000512823 224 ntBASIC0.79□□□□□ -2.28
CLDN12P56749 AC104136.1-201ENST00000512969 394 ntBASIC0.79□□□□□ -2.28
CLDN12P56749 MTCO3P28-201ENST00000513351 515 ntBASIC0.79□□□□□ -2.28
CLDN12P56749 RNU2-34P-201ENST00000516534 121 ntBASIC0.79□□□□□ -2.28
CLDN12P56749 RNU6-567P-201ENST00000516746 107 ntBASIC0.79□□□□□ -2.28
CLDN12P56749 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.79□□□□□ -2.28
CLDN12P56749 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.79□□□□□ -2.28
CLDN12P56749 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.79□□□□□ -2.28
CLDN12P56749 EIF4A1P12-201ENST00000551910 141 ntBASIC0.79□□□□□ -2.28
CLDN12P56749 AC018645.2-201ENST00000609151 472 ntBASIC0.79□□□□□ -2.28
CLDN12P56749 PCGEM1.1-201ENST00000613431 131 ntBASIC0.79□□□□□ -2.28
CLDN12P56749 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.79□□□□□ -2.28
CLDN12P56749 MIR19B1-201ENST00000384829 87 ntBASIC0.78□□□□□ -2.28
CLDN12P56749 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC0.78□□□□□ -2.28
CLDN12P56749 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.78□□□□□ -2.28
CLDN12P56749 RNU7-14P-201ENST00000459331 62 ntBASIC0.78□□□□□ -2.28
CLDN12P56749 MTND3P25-201ENST00000509243 135 ntBASIC0.78□□□□□ -2.28
CLDN12P56749 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.78□□□□□ -2.28
CLDN12P56749 AC067942.3-201ENST00000512025 362 ntBASIC0.78□□□□□ -2.28
CLDN12P56749 AC108729.3-201ENST00000513484 108 ntBASIC0.78□□□□□ -2.28
CLDN12P56749 RNU5F-4P-201ENST00000516581 114 ntBASIC0.78□□□□□ -2.28
CLDN12P56749 CBX3P8-201ENST00000532412 525 ntBASIC0.78□□□□□ -2.28
CLDN12P56749 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.78□□□□□ -2.28
CLDN12P56749 MIR4709-201ENST00000577272 72 ntBASIC0.78□□□□□ -2.28
CLDN12P56749 AC073539.2-201ENST00000597113 165 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms