Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.78□□□□□ -2.12
LIM2P55344 AC016256.1-201ENST00000547971 354 ntBASIC1.78□□□□□ -2.12
LIM2P55344 AC007375.1-201ENST00000554513 578 ntBASIC1.78□□□□□ -2.12
LIM2P55344 MIR4529-201ENST00000578110 78 ntBASIC1.78□□□□□ -2.12
LIM2P55344 MIR4298-201ENST00000584380 73 ntBASIC1.78□□□□□ -2.12
LIM2P55344 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.78□□□□□ -2.12
LIM2P55344 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.78□□□□□ -2.12
LIM2P55344 AP001836.1-201ENST00000604675 523 ntBASIC1.78□□□□□ -2.12
LIM2P55344 AL034555.1-201ENST00000604816 211 ntBASIC1.78□□□□□ -2.12
LIM2P55344 AC103591.3-201ENST00000608684 209 ntBASIC1.78□□□□□ -2.12
LIM2P55344 AL132822.1-201ENST00000617063 513 ntBASIC1.78□□□□□ -2.12
LIM2P55344 AC097372.5-201ENST00000623665 376 ntBASIC1.78□□□□□ -2.12
LIM2P55344 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.78□□□□□ -2.13
LIM2P55344 Y_RNA.231-201ENST00000364358 102 ntBASIC1.77□□□□□ -2.13
LIM2P55344 RNU4-66P-201ENST00000365199 138 ntBASIC1.77□□□□□ -2.13
LIM2P55344 Y_RNA.381-201ENST00000365666 102 ntBASIC1.77□□□□□ -2.13
LIM2P55344 Y_RNA.409-201ENST00000383990 98 ntBASIC1.77□□□□□ -2.13
LIM2P55344 SNORA6-201ENST00000384033 151 ntBASIC1.77□□□□□ -2.13
LIM2P55344 EIF4E2P1-201ENST00000393781 255 ntBASIC1.77□□□□□ -2.13
LIM2P55344 RN7SKP284-201ENST00000411002 343 ntBASIC1.77□□□□□ -2.13
LIM2P55344 RNU2-32P-201ENST00000411193 191 ntBASIC1.77□□□□□ -2.13
LIM2P55344 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.77□□□□□ -2.13
LIM2P55344 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.77□□□□□ -2.13
LIM2P55344 AL445685.2-201ENST00000422551 342 ntBASIC1.77□□□□□ -2.13
LIM2P55344 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.77□□□□□ -2.13
LIM2P55344 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.77□□□□□ -2.13
LIM2P55344 AL137159.1-201ENST00000452808 512 ntBASIC1.77□□□□□ -2.13
LIM2P55344 RNU6-1037P-201ENST00000459571 107 ntBASIC1.77□□□□□ -2.13
LIM2P55344 AC087884.1-201ENST00000469738 328 ntBASIC1.77□□□□□ -2.13
LIM2P55344 RN7SL274P-201ENST00000492268 272 ntBASIC1.77□□□□□ -2.13
LIM2P55344 AC016632.1-201ENST00000503994 196 ntBASIC1.77□□□□□ -2.13
LIM2P55344 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
LIM2P55344 RNU6-506P-201ENST00000516553 94 ntBASIC1.77□□□□□ -2.13
LIM2P55344 RNU6-567P-201ENST00000516746 107 ntBASIC1.77□□□□□ -2.13
LIM2P55344 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.77□□□□□ -2.13
LIM2P55344 ZNF519P2-201ENST00000557032 169 ntBASIC1.77□□□□□ -2.13
LIM2P55344 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.77□□□□□ -2.13
LIM2P55344 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.77□□□□□ -2.13
LIM2P55344 AC110588.1-201ENST00000559699 137 ntBASIC1.77□□□□□ -2.13
LIM2P55344 EIF1P4-201ENST00000572664 335 ntBASIC1.77□□□□□ -2.13
LIM2P55344 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.77□□□□□ -2.13
LIM2P55344 AC092747.3-201ENST00000603769 301 ntBASIC1.77□□□□□ -2.13
LIM2P55344 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
LIM2P55344 AC004492.1-201ENST00000607036 742 ntBASIC1.77□□□□□ -2.13
LIM2P55344 DISC2.1-201ENST00000612827 205 ntBASIC1.77□□□□□ -2.13
LIM2P55344 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
LIM2P55344 AC008555.8-201ENST00000623602 2168 ntBASIC1.76□□□□□ -2.13
LIM2P55344 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
LIM2P55344 RNU4-20P-201ENST00000365601 151 ntBASIC1.76□□□□□ -2.13
LIM2P55344 Y_RNA.436-201ENST00000384097 102 ntBASIC1.76□□□□□ -2.13
LIM2P55344 RNU6-692P-201ENST00000384496 107 ntBASIC1.76□□□□□ -2.13
LIM2P55344 Y_RNA.517-201ENST00000384551 106 ntBASIC1.76□□□□□ -2.13
LIM2P55344 HMGN2P39-201ENST00000398005 273 ntBASIC1.76□□□□□ -2.13
LIM2P55344 MIR1261-201ENST00000408659 82 ntBASIC1.76□□□□□ -2.13
LIM2P55344 SRIP3-201ENST00000413200 219 ntBASIC1.76□□□□□ -2.13
LIM2P55344 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.76□□□□□ -2.13
LIM2P55344 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.76□□□□□ -2.13
LIM2P55344 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.76□□□□□ -2.13
LIM2P55344 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.76□□□□□ -2.13
LIM2P55344 MTND3P16-201ENST00000452205 344 ntBASIC1.76□□□□□ -2.13
LIM2P55344 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.76□□□□□ -2.13
LIM2P55344 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.76□□□□□ -2.13
LIM2P55344 snoU13.15-201ENST00000459407 104 ntBASIC1.76□□□□□ -2.13
LIM2P55344 SNORA4.4-201ENST00000515921 135 ntBASIC1.76□□□□□ -2.13
LIM2P55344 RNA5SP182-201ENST00000516064 82 ntBASIC1.76□□□□□ -2.13
LIM2P55344 RNU6-1281P-201ENST00000516223 105 ntBASIC1.76□□□□□ -2.13
LIM2P55344 RNU6-667P-201ENST00000517186 102 ntBASIC1.76□□□□□ -2.13
LIM2P55344 RNU2-19P-201ENST00000517288 84 ntBASIC1.76□□□□□ -2.13
LIM2P55344 AC103996.1-201ENST00000555468 102 ntBASIC1.76□□□□□ -2.13
LIM2P55344 AC233702.2-202ENST00000562547 291 ntBASIC1.76□□□□□ -2.13
LIM2P55344 AC107304.1-201ENST00000604229 296 ntBASIC1.76□□□□□ -2.13
LIM2P55344 AC092807.2-201ENST00000609367 243 ntBASIC1.76□□□□□ -2.13
LIM2P55344 AC093783.1-201ENST00000612976 329 ntBASIC1.76□□□□□ -2.13
LIM2P55344 uc_338.20-201ENST00000621563 178 ntBASIC1.76□□□□□ -2.13
LIM2P55344 SNORD98-201ENST00000636377 67 ntBASIC1.76□□□□□ -2.13
LIM2P55344 MIR1321-201ENST00000637766 79 ntBASIC1.76□□□□□ -2.13
LIM2P55344 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.76□□□□□ -2.13
LIM2P55344 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
LIM2P55344 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.75□□□□□ -2.13
LIM2P55344 AL596028.1-201ENST00000326971 197 ntBASIC1.75□□□□□ -2.13
LIM2P55344 snoU2_19.1-201ENST00000362361 80 ntBASIC1.75□□□□□ -2.13
LIM2P55344 SNORA16B-201ENST00000364674 135 ntBASIC1.75□□□□□ -2.13
LIM2P55344 MTCYBP2-201ENST00000407745 171 ntBASIC1.75□□□□□ -2.13
LIM2P55344 RNU6-908P-201ENST00000410160 94 ntBASIC1.75□□□□□ -2.13
LIM2P55344 ERLEC1P1-201ENST00000433806 578 ntBASIC1.75□□□□□ -2.13
LIM2P55344 IFNA20P-201ENST00000436840 528 ntBASIC1.75□□□□□ -2.13
LIM2P55344 AC003989.2-201ENST00000440224 169 ntBASIC1.75□□□□□ -2.13
LIM2P55344 AL359672.1-201ENST00000442302 409 ntBASIC1.75□□□□□ -2.13
LIM2P55344 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.75□□□□□ -2.13
LIM2P55344 AC055731.1-201ENST00000474387 401 ntBASIC1.75□□□□□ -2.13
LIM2P55344 AC107032.1-201ENST00000485945 480 ntBASIC1.75□□□□□ -2.13
LIM2P55344 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.75□□□□□ -2.13
LIM2P55344 AC114801.2-201ENST00000503825 781 ntBASIC1.75□□□□□ -2.13
LIM2P55344 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.75□□□□□ -2.13
LIM2P55344 SNORA19.2-201ENST00000516013 114 ntBASIC1.75□□□□□ -2.13
LIM2P55344 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.75□□□□□ -2.13
LIM2P55344 AL118558.2-201ENST00000556294 238 ntBASIC1.75□□□□□ -2.13
LIM2P55344 AC245505.1-201ENST00000556398 224 ntBASIC1.75□□□□□ -2.13
LIM2P55344 AC021231.3-201ENST00000558497 370 ntBASIC1.75□□□□□ -2.13
LIM2P55344 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms