Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 RNU1-40P-201ENST00000516816 164 ntBASIC2.1□□□□□ -2.07
HMGCS2P54868 RNU1-97P-201ENST00000516872 164 ntBASIC2.1□□□□□ -2.07
HMGCS2P54868 CYCSP27-201ENST00000527643 293 ntBASIC2.1□□□□□ -2.07
HMGCS2P54868 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.1□□□□□ -2.07
HMGCS2P54868 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.1□□□□□ -2.07
HMGCS2P54868 MYL12BP1-201ENST00000569826 507 ntBASIC2.1□□□□□ -2.07
HMGCS2P54868 AC009127.3-201ENST00000570531 403 ntBASIC2.1□□□□□ -2.07
HMGCS2P54868 AL670379.10-201ENST00000604330 253 ntBASIC2.1□□□□□ -2.07
HMGCS2P54868 CTHRC1P1-201ENST00000605383 469 ntBASIC2.1□□□□□ -2.07
HMGCS2P54868 AL670379.9-201ENST00000605428 253 ntBASIC2.1□□□□□ -2.07
HMGCS2P54868 Z82243.1-201ENST00000609432 473 ntBASIC2.1□□□□□ -2.07
HMGCS2P54868 AC068944.2-201ENST00000610373 403 ntBASIC2.1□□□□□ -2.07
HMGCS2P54868 AL121757.2-201ENST00000611223 313 ntBASIC2.1□□□□□ -2.07
HMGCS2P54868 MIR6895-201ENST00000613497 78 ntBASIC2.1□□□□□ -2.07
HMGCS2P54868 U6atac.1-201ENST00000616025 117 ntBASIC2.1□□□□□ -2.07
HMGCS2P54868 MIR3662-201ENST00000637030 95 ntBASIC2.1□□□□□ -2.07
HMGCS2P54868 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.1□□□□□ -2.07
HMGCS2P54868 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
HMGCS2P54868 AC138393.1-203ENST00000327086 343 ntBASIC2.09□□□□□ -2.07
HMGCS2P54868 RNU6-843P-201ENST00000384454 104 ntBASIC2.09□□□□□ -2.07
HMGCS2P54868 MIR147B-201ENST00000390185 80 ntBASIC2.09□□□□□ -2.07
HMGCS2P54868 AL133475.1-201ENST00000404414 305 ntBASIC2.09□□□□□ -2.07
HMGCS2P54868 RNU4-62P-201ENST00000410125 130 ntBASIC2.09□□□□□ -2.07
HMGCS2P54868 ARL5AP1-201ENST00000418991 388 ntBASIC2.09□□□□□ -2.07
HMGCS2P54868 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.09□□□□□ -2.07
HMGCS2P54868 AL358453.1-201ENST00000422522 250 ntBASIC2.09□□□□□ -2.07
HMGCS2P54868 HMGB1P31-201ENST00000437242 427 ntBASIC2.09□□□□□ -2.07
HMGCS2P54868 NFU1P2-201ENST00000448700 469 ntBASIC2.09□□□□□ -2.07
HMGCS2P54868 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.09□□□□□ -2.07
HMGCS2P54868 AL441985.1-201ENST00000457727 251 ntBASIC2.09□□□□□ -2.07
HMGCS2P54868 MED28P2-201ENST00000475771 317 ntBASIC2.09□□□□□ -2.07
HMGCS2P54868 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.09□□□□□ -2.07
HMGCS2P54868 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.09□□□□□ -2.07
HMGCS2P54868 SNORA31.23-201ENST00000517219 133 ntBASIC2.09□□□□□ -2.07
HMGCS2P54868 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
HMGCS2P54868 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.09□□□□□ -2.07
HMGCS2P54868 SNORA59B-202ENST00000578183 701 ntBASIC2.09□□□□□ -2.07
HMGCS2P54868 AC105245.1-201ENST00000581934 244 ntBASIC2.09□□□□□ -2.07
HMGCS2P54868 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.09□□□□□ -2.07
HMGCS2P54868 MIR3941-201ENST00000582572 103 ntBASIC2.09□□□□□ -2.07
HMGCS2P54868 MIR4781-201ENST00000585250 76 ntBASIC2.09□□□□□ -2.07
HMGCS2P54868 MIR5692C1-201ENST00000585309 91 ntBASIC2.09□□□□□ -2.07
HMGCS2P54868 RPS15AP11-201ENST00000594193 385 ntBASIC2.09□□□□□ -2.07
HMGCS2P54868 AC008121.1-201ENST00000603244 268 ntBASIC2.09□□□□□ -2.07
HMGCS2P54868 FAM157A-202ENST00000615155 405 ntBASIC2.09□□□□□ -2.07
HMGCS2P54868 U4.7-201ENST00000638126 106 ntBASIC2.09□□□□□ -2.07
HMGCS2P54868 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
HMGCS2P54868 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
HMGCS2P54868 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.09□□□□□ -2.08
HMGCS2P54868 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
HMGCS2P54868 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.08□□□□□ -2.08
HMGCS2P54868 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
HMGCS2P54868 AL359854.1-201ENST00000614203 1594 ntBASIC2.08□□□□□ -2.08
HMGCS2P54868 RNU6-486P-201ENST00000363116 107 ntBASIC2.08□□□□□ -2.08
HMGCS2P54868 SNORD116-20-201ENST00000384529 92 ntBASIC2.08□□□□□ -2.08
HMGCS2P54868 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.08□□□□□ -2.08
HMGCS2P54868 FABP5P14-201ENST00000437273 393 ntBASIC2.08□□□□□ -2.08
HMGCS2P54868 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.08□□□□□ -2.08
HMGCS2P54868 AC013470.1-201ENST00000453438 462 ntBASIC2.08□□□□□ -2.08
HMGCS2P54868 RNU7-66P-201ENST00000459469 62 ntBASIC2.08□□□□□ -2.08
HMGCS2P54868 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.08□□□□□ -2.08
HMGCS2P54868 AC079804.2-201ENST00000490376 200 ntBASIC2.08□□□□□ -2.08
HMGCS2P54868 RNA5SP112-201ENST00000515937 99 ntBASIC2.08□□□□□ -2.08
HMGCS2P54868 RNU5B-3P-201ENST00000516601 115 ntBASIC2.08□□□□□ -2.08
HMGCS2P54868 RNU6-85P-201ENST00000605989 107 ntBASIC2.08□□□□□ -2.08
HMGCS2P54868 SNORD14A-201ENST00000606526 91 ntBASIC2.08□□□□□ -2.08
HMGCS2P54868 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.08□□□□□ -2.08
HMGCS2P54868 AC090617.10-201ENST00000624308 134 ntBASIC2.08□□□□□ -2.08
HMGCS2P54868 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
HMGCS2P54868 AL109809.4-201ENST00000603520 2185 ntBASIC2.08□□□□□ -2.08
HMGCS2P54868 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
HMGCS2P54868 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
HMGCS2P54868 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
HMGCS2P54868 RNU6-858P-201ENST00000362436 107 ntBASIC2.07□□□□□ -2.08
HMGCS2P54868 RNU6-622P-201ENST00000384272 103 ntBASIC2.07□□□□□ -2.08
HMGCS2P54868 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
HMGCS2P54868 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.07□□□□□ -2.08
HMGCS2P54868 U6atac.2-201ENST00000408644 118 ntBASIC2.07□□□□□ -2.08
HMGCS2P54868 AC074117.2-201ENST00000417130 397 ntBASIC2.07□□□□□ -2.08
HMGCS2P54868 AL117339.3-201ENST00000418733 162 ntBASIC2.07□□□□□ -2.08
HMGCS2P54868 RPL30P16-201ENST00000419341 429 ntBASIC2.07□□□□□ -2.08
HMGCS2P54868 MTATP6P13-201ENST00000438531 667 ntBASIC2.07□□□□□ -2.08
HMGCS2P54868 RNU6-717P-201ENST00000459076 104 ntBASIC2.07□□□□□ -2.08
HMGCS2P54868 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.07□□□□□ -2.08
HMGCS2P54868 FAM206BP-201ENST00000510179 541 ntBASIC2.07□□□□□ -2.08
HMGCS2P54868 COPS8P3-201ENST00000526024 482 ntBASIC2.07□□□□□ -2.08
HMGCS2P54868 AP005597.4-201ENST00000526762 229 ntBASIC2.07□□□□□ -2.08
HMGCS2P54868 PRELID2P1-201ENST00000552837 301 ntBASIC2.07□□□□□ -2.08
HMGCS2P54868 MIR4303-201ENST00000581299 66 ntBASIC2.07□□□□□ -2.08
HMGCS2P54868 AL670379.2-201ENST00000604983 252 ntBASIC2.07□□□□□ -2.08
HMGCS2P54868 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
HMGCS2P54868 RBBP8P1-201ENST00000449447 1844 ntBASIC2.07□□□□□ -2.08
HMGCS2P54868 RNU5E-7P-201ENST00000365290 117 ntBASIC2.06□□□□□ -2.08
HMGCS2P54868 Y_RNA.373-201ENST00000365600 103 ntBASIC2.06□□□□□ -2.08
HMGCS2P54868 SNORA6-201ENST00000384033 151 ntBASIC2.06□□□□□ -2.08
HMGCS2P54868 SNORD73A-201ENST00000386062 65 ntBASIC2.06□□□□□ -2.08
HMGCS2P54868 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
HMGCS2P54868 EIF4E2P1-201ENST00000393781 255 ntBASIC2.06□□□□□ -2.08
HMGCS2P54868 RNU6-373P-201ENST00000411247 98 ntBASIC2.06□□□□□ -2.08
HMGCS2P54868 AL513185.2-201ENST00000425543 193 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms