Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 AC006111.3-201ENST00000622137 383 ntBASIC3.17□□□□□ -1.9
CACNA2D1P54289 FAM35CP-201ENST00000554755 2470 ntBASIC3.17□□□□□ -1.9
CACNA2D1P54289 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
CACNA2D1P54289 AC090740.1-201ENST00000623193 2262 ntBASIC3.17□□□□□ -1.9
CACNA2D1P54289 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CACNA2D1P54289 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
CACNA2D1P54289 AC008568.2-201ENST00000623862 2313 ntBASIC3.16□□□□□ -1.9
CACNA2D1P54289 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CACNA2D1P54289 Y_RNA.183-201ENST00000363882 113 ntBASIC3.16□□□□□ -1.9
CACNA2D1P54289 RNU1-140P-201ENST00000365040 165 ntBASIC3.16□□□□□ -1.9
CACNA2D1P54289 RNU6-741P-201ENST00000383889 107 ntBASIC3.16□□□□□ -1.9
CACNA2D1P54289 RNU6-209P-201ENST00000384118 107 ntBASIC3.16□□□□□ -1.9
CACNA2D1P54289 MIR215-201ENST00000384858 110 ntBASIC3.16□□□□□ -1.9
CACNA2D1P54289 MIR34A-201ENST00000385130 110 ntBASIC3.16□□□□□ -1.9
CACNA2D1P54289 MIR1290-201ENST00000408735 78 ntBASIC3.16□□□□□ -1.9
CACNA2D1P54289 RNU2-68P-201ENST00000410878 191 ntBASIC3.16□□□□□ -1.9
CACNA2D1P54289 RNU2-64P-201ENST00000411315 191 ntBASIC3.16□□□□□ -1.9
CACNA2D1P54289 AL139132.1-201ENST00000431587 344 ntBASIC3.16□□□□□ -1.9
CACNA2D1P54289 AL078601.1-201ENST00000444542 271 ntBASIC3.16□□□□□ -1.9
CACNA2D1P54289 AC025465.3-201ENST00000510570 311 ntBASIC3.16□□□□□ -1.9
CACNA2D1P54289 AC109479.2-201ENST00000517842 174 ntBASIC3.16□□□□□ -1.9
CACNA2D1P54289 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.16□□□□□ -1.9
CACNA2D1P54289 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.16□□□□□ -1.9
CACNA2D1P54289 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CACNA2D1P54289 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.16□□□□□ -1.9
CACNA2D1P54289 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
CACNA2D1P54289 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CACNA2D1P54289 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.15□□□□□ -1.9
CACNA2D1P54289 RNU6-212P-201ENST00000362642 104 ntBASIC3.15□□□□□ -1.91
CACNA2D1P54289 RNU6-227P-201ENST00000362865 103 ntBASIC3.15□□□□□ -1.91
CACNA2D1P54289 RNU1-76P-201ENST00000362903 159 ntBASIC3.15□□□□□ -1.91
CACNA2D1P54289 RNU6-336P-201ENST00000364891 107 ntBASIC3.15□□□□□ -1.91
CACNA2D1P54289 RNU5E-7P-201ENST00000365290 117 ntBASIC3.15□□□□□ -1.91
CACNA2D1P54289 Y_RNA.405-201ENST00000383979 100 ntBASIC3.15□□□□□ -1.91
CACNA2D1P54289 Y_RNA.451-201ENST00000384200 100 ntBASIC3.15□□□□□ -1.91
CACNA2D1P54289 Y_RNA.458-201ENST00000384240 102 ntBASIC3.15□□□□□ -1.91
CACNA2D1P54289 Y_RNA.524-201ENST00000384564 100 ntBASIC3.15□□□□□ -1.91
CACNA2D1P54289 Y_RNA.561-201ENST00000384694 100 ntBASIC3.15□□□□□ -1.91
CACNA2D1P54289 SNORA12.2-201ENST00000391040 156 ntBASIC3.15□□□□□ -1.91
CACNA2D1P54289 RPS4XP3-201ENST00000398541 413 ntBASIC3.15□□□□□ -1.91
CACNA2D1P54289 MIR190B-201ENST00000401119 79 ntBASIC3.15□□□□□ -1.91
CACNA2D1P54289 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.15□□□□□ -1.91
CACNA2D1P54289 AL590664.1-201ENST00000448065 339 ntBASIC3.15□□□□□ -1.91
CACNA2D1P54289 RNU7-87P-201ENST00000459343 62 ntBASIC3.15□□□□□ -1.91
CACNA2D1P54289 AP001486.1-201ENST00000463339 476 ntBASIC3.15□□□□□ -1.91
CACNA2D1P54289 RPL30P14-201ENST00000482744 348 ntBASIC3.15□□□□□ -1.91
CACNA2D1P54289 AC010469.2-201ENST00000496412 480 ntBASIC3.15□□□□□ -1.91
CACNA2D1P54289 RN7SKP272-201ENST00000516988 232 ntBASIC3.15□□□□□ -1.91
CACNA2D1P54289 RNU6-111P-201ENST00000517179 105 ntBASIC3.15□□□□□ -1.91
CACNA2D1P54289 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.15□□□□□ -1.91
CACNA2D1P54289 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.15□□□□□ -1.91
CACNA2D1P54289 AC136601.2-201ENST00000604356 474 ntBASIC3.15□□□□□ -1.91
CACNA2D1P54289 MIR6076-201ENST00000617521 113 ntBASIC3.15□□□□□ -1.91
CACNA2D1P54289 AC006386.2-201ENST00000624491 75 ntBASIC3.15□□□□□ -1.91
CACNA2D1P54289 AC012005.1-201ENST00000624575 75 ntBASIC3.15□□□□□ -1.91
CACNA2D1P54289 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
CACNA2D1P54289 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CACNA2D1P54289 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.14□□□□□ -1.91
CACNA2D1P54289 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
CACNA2D1P54289 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CACNA2D1P54289 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CACNA2D1P54289 Y_RNA.84-201ENST00000363011 104 ntBASIC3.14□□□□□ -1.91
CACNA2D1P54289 SNORD27-201ENST00000363981 72 ntBASIC3.14□□□□□ -1.91
CACNA2D1P54289 Y_RNA.515-201ENST00000384535 112 ntBASIC3.14□□□□□ -1.91
CACNA2D1P54289 Y_RNA.518-201ENST00000384552 113 ntBASIC3.14□□□□□ -1.91
CACNA2D1P54289 RNU4-70P-201ENST00000384579 139 ntBASIC3.14□□□□□ -1.91
CACNA2D1P54289 MIR325-201ENST00000385260 98 ntBASIC3.14□□□□□ -1.91
CACNA2D1P54289 AL031121.1-201ENST00000406553 254 ntBASIC3.14□□□□□ -1.91
CACNA2D1P54289 RNU2-25P-201ENST00000411041 191 ntBASIC3.14□□□□□ -1.91
CACNA2D1P54289 AL139281.1-201ENST00000422120 335 ntBASIC3.14□□□□□ -1.91
CACNA2D1P54289 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.14□□□□□ -1.91
CACNA2D1P54289 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.14□□□□□ -1.91
CACNA2D1P54289 NDUFB4P6-201ENST00000436819 366 ntBASIC3.14□□□□□ -1.91
CACNA2D1P54289 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.14□□□□□ -1.91
CACNA2D1P54289 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.14□□□□□ -1.91
CACNA2D1P54289 U8.22-201ENST00000459141 133 ntBASIC3.14□□□□□ -1.91
CACNA2D1P54289 AL049873.1-201ENST00000480540 376 ntBASIC3.14□□□□□ -1.91
CACNA2D1P54289 RNA5SP291-201ENST00000517222 105 ntBASIC3.14□□□□□ -1.91
CACNA2D1P54289 RNU6-711P-201ENST00000517255 106 ntBASIC3.14□□□□□ -1.91
CACNA2D1P54289 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CACNA2D1P54289 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.14□□□□□ -1.91
CACNA2D1P54289 TRAV28-201ENST00000557548 323 ntBASIC3.14□□□□□ -1.91
CACNA2D1P54289 H3F3AP1-201ENST00000559984 334 ntBASIC3.14□□□□□ -1.91
CACNA2D1P54289 AL355877.2-201ENST00000603670 358 ntBASIC3.14□□□□□ -1.91
CACNA2D1P54289 AC010900.2-201ENST00000604508 210 ntBASIC3.14□□□□□ -1.91
CACNA2D1P54289 AC093732.2-201ENST00000607950 274 ntBASIC3.14□□□□□ -1.91
CACNA2D1P54289 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.14□□□□□ -1.91
CACNA2D1P54289 U6.99-201ENST00000637524 83 ntBASIC3.14□□□□□ -1.91
CACNA2D1P54289 U4.7-201ENST00000638126 106 ntBASIC3.14□□□□□ -1.91
CACNA2D1P54289 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.13□□□□□ -1.91
CACNA2D1P54289 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
CACNA2D1P54289 Y_RNA.27-201ENST00000362540 103 ntBASIC3.13□□□□□ -1.91
CACNA2D1P54289 RNU6-78P-201ENST00000362897 107 ntBASIC3.13□□□□□ -1.91
CACNA2D1P54289 SNORA80A-201ENST00000363922 136 ntBASIC3.13□□□□□ -1.91
CACNA2D1P54289 U8.9-201ENST00000365667 134 ntBASIC3.13□□□□□ -1.91
CACNA2D1P54289 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.13□□□□□ -1.91
CACNA2D1P54289 RNU6-1197P-201ENST00000391183 107 ntBASIC3.13□□□□□ -1.91
CACNA2D1P54289 RPL21P75-201ENST00000396599 483 ntBASIC3.13□□□□□ -1.91
CACNA2D1P54289 RPL21P28-201ENST00000401418 483 ntBASIC3.13□□□□□ -1.91
CACNA2D1P54289 EEF1A1P41-201ENST00000414667 207 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms