Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AC105758.1-201ENST00000506038 399 ntBASIC3□□□□□ -1.93
COPB1P53618 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3□□□□□ -1.93
COPB1P53618 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3□□□□□ -1.93
COPB1P53618 AP000867.2-201ENST00000532468 320 ntBASIC3□□□□□ -1.93
COPB1P53618 AC010186.2-204ENST00000537668 439 ntBASIC3□□□□□ -1.93
COPB1P53618 AC104695.3-201ENST00000604052 296 ntBASIC3□□□□□ -1.93
COPB1P53618 AC138305.3-201ENST00000624988 240 ntBASIC3□□□□□ -1.93
COPB1P53618 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
COPB1P53618 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
COPB1P53618 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.99□□□□□ -1.93
COPB1P53618 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
COPB1P53618 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
COPB1P53618 RNU6-527P-201ENST00000363425 104 ntBASIC2.99□□□□□ -1.93
COPB1P53618 Y_RNA.133-201ENST00000363428 110 ntBASIC2.99□□□□□ -1.93
COPB1P53618 RNU6-1280P-201ENST00000365211 107 ntBASIC2.99□□□□□ -1.93
COPB1P53618 RNU6-1105P-201ENST00000384774 107 ntBASIC2.99□□□□□ -1.93
COPB1P53618 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
COPB1P53618 MIR887-201ENST00000401258 79 ntBASIC2.99□□□□□ -1.93
COPB1P53618 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.99□□□□□ -1.93
COPB1P53618 AC112220.1-201ENST00000434628 355 ntBASIC2.99□□□□□ -1.93
COPB1P53618 MTND3P2-201ENST00000438452 342 ntBASIC2.99□□□□□ -1.93
COPB1P53618 AC107083.1-201ENST00000439643 279 ntBASIC2.99□□□□□ -1.93
COPB1P53618 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.99□□□□□ -1.93
COPB1P53618 RPL39P40-201ENST00000445481 146 ntBASIC2.99□□□□□ -1.93
COPB1P53618 RPS27AP9-201ENST00000477681 438 ntBASIC2.99□□□□□ -1.93
COPB1P53618 AC090525.1-201ENST00000479116 478 ntBASIC2.99□□□□□ -1.93
COPB1P53618 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.99□□□□□ -1.93
COPB1P53618 RPL23AP49-201ENST00000492925 468 ntBASIC2.99□□□□□ -1.93
COPB1P53618 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.99□□□□□ -1.93
COPB1P53618 RNU6-475P-201ENST00000516073 104 ntBASIC2.99□□□□□ -1.93
COPB1P53618 SNORA31.23-201ENST00000517219 133 ntBASIC2.99□□□□□ -1.93
COPB1P53618 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.99□□□□□ -1.93
COPB1P53618 GNAI2P1-201ENST00000541815 315 ntBASIC2.99□□□□□ -1.93
COPB1P53618 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.99□□□□□ -1.93
COPB1P53618 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.99□□□□□ -1.93
COPB1P53618 AL606534.2-204ENST00000635008 178 ntBASIC2.99□□□□□ -1.93
COPB1P53618 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.99□□□□□ -1.93
COPB1P53618 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.98□□□□□ -1.93
COPB1P53618 AC005592.1-201ENST00000566527 1640 ntBASIC2.98□□□□□ -1.93
COPB1P53618 Y_RNA.123-201ENST00000363338 102 ntBASIC2.98□□□□□ -1.93
COPB1P53618 SNORA18.3-201ENST00000384122 132 ntBASIC2.98□□□□□ -1.93
COPB1P53618 RNU6-198P-201ENST00000384258 104 ntBASIC2.98□□□□□ -1.93
COPB1P53618 Y_RNA.485-201ENST00000384395 102 ntBASIC2.98□□□□□ -1.93
COPB1P53618 SNORA44-201ENST00000384584 132 ntBASIC2.98□□□□□ -1.93
COPB1P53618 RNA5SP252-201ENST00000391131 119 ntBASIC2.98□□□□□ -1.93
COPB1P53618 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.98□□□□□ -1.93
COPB1P53618 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.98□□□□□ -1.93
COPB1P53618 AL591043.1-201ENST00000432461 424 ntBASIC2.98□□□□□ -1.93
COPB1P53618 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.98□□□□□ -1.93
COPB1P53618 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
COPB1P53618 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.98□□□□□ -1.93
COPB1P53618 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.98□□□□□ -1.93
COPB1P53618 RNU7-23P-201ENST00000459465 62 ntBASIC2.98□□□□□ -1.93
COPB1P53618 RPL30P10-201ENST00000488148 337 ntBASIC2.98□□□□□ -1.93
COPB1P53618 AC021146.2-201ENST00000504736 556 ntBASIC2.98□□□□□ -1.93
COPB1P53618 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.98□□□□□ -1.93
COPB1P53618 AC060766.3-201ENST00000591442 263 ntBASIC2.98□□□□□ -1.93
COPB1P53618 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.98□□□□□ -1.93
COPB1P53618 AC008121.3-201ENST00000618726 433 ntBASIC2.98□□□□□ -1.93
COPB1P53618 AL162373.1-201ENST00000620433 407 ntBASIC2.98□□□□□ -1.93
COPB1P53618 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.98□□□□□ -1.93
COPB1P53618 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.98□□□□□ -1.93
COPB1P53618 MTND5P16-201ENST00000460269 1703 ntBASIC2.98□□□□□ -1.93
COPB1P53618 AC008669.1-201ENST00000565823 2178 ntBASIC2.98□□□□□ -1.93
COPB1P53618 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.98□□□□□ -1.93
COPB1P53618 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.98□□□□□ -1.93
COPB1P53618 AC091812.1-201ENST00000432235 1948 ntBASIC2.97□□□□□ -1.93
COPB1P53618 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
COPB1P53618 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
COPB1P53618 RNU4-42P-201ENST00000364738 142 ntBASIC2.97□□□□□ -1.93
COPB1P53618 SNORD32A-201ENST00000364805 84 ntBASIC2.97□□□□□ -1.93
COPB1P53618 RNU6-843P-201ENST00000384454 104 ntBASIC2.97□□□□□ -1.93
COPB1P53618 Y_RNA.527-201ENST00000384573 102 ntBASIC2.97□□□□□ -1.93
COPB1P53618 MIR592-201ENST00000384959 97 ntBASIC2.97□□□□□ -1.93
COPB1P53618 AL356057.3-201ENST00000402607 340 ntBASIC2.97□□□□□ -1.93
COPB1P53618 MIR548F4-201ENST00000408515 105 ntBASIC2.97□□□□□ -1.93
COPB1P53618 AL139132.1-201ENST00000431587 344 ntBASIC2.97□□□□□ -1.93
COPB1P53618 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.97□□□□□ -1.93
COPB1P53618 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.97□□□□□ -1.93
COPB1P53618 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.97□□□□□ -1.93
COPB1P53618 RPL21P2-201ENST00000440049 481 ntBASIC2.97□□□□□ -1.93
COPB1P53618 AL353752.1-201ENST00000454946 260 ntBASIC2.97□□□□□ -1.93
COPB1P53618 AC112492.4-201ENST00000456549 352 ntBASIC2.97□□□□□ -1.93
COPB1P53618 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.97□□□□□ -1.93
COPB1P53618 MED28P2-201ENST00000475771 317 ntBASIC2.97□□□□□ -1.93
COPB1P53618 AP001025.1-201ENST00000486139 332 ntBASIC2.97□□□□□ -1.93
COPB1P53618 RNU6-764P-201ENST00000516396 105 ntBASIC2.97□□□□□ -1.93
COPB1P53618 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.97□□□□□ -1.93
COPB1P53618 AC009163.5-201ENST00000575421 637 ntBASIC2.97□□□□□ -1.93
COPB1P53618 AC087588.2-201ENST00000617667 426 ntBASIC2.97□□□□□ -1.93
COPB1P53618 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.97□□□□□ -1.93
COPB1P53618 MIR4272-201ENST00000635924 64 ntBASIC2.97□□□□□ -1.93
COPB1P53618 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
COPB1P53618 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
COPB1P53618 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.97□□□□□ -1.93
COPB1P53618 ADAM3A-203ENST00000461344 2157 ntBASIC2.97□□□□□ -1.93
COPB1P53618 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.96□□□□□ -1.94
COPB1P53618 SNORD56.1-201ENST00000362913 68 ntBASIC2.96□□□□□ -1.94
COPB1P53618 Y_RNA.314-201ENST00000365114 102 ntBASIC2.96□□□□□ -1.94
COPB1P53618 SNORD21-201ENST00000383953 95 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms