Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 AC116337.1-201ENST00000509680 687 ntBASIC2□□□□□ -2.09
SMSP52788 PTP4A1P4-201ENST00000512479 322 ntBASIC2□□□□□ -2.09
SMSP52788 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2□□□□□ -2.09
SMSP52788 RNU6-991P-201ENST00000516168 107 ntBASIC2□□□□□ -2.09
SMSP52788 RNU6-835P-201ENST00000516974 104 ntBASIC2□□□□□ -2.09
SMSP52788 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2□□□□□ -2.09
SMSP52788 AC107304.1-201ENST00000604229 296 ntBASIC2□□□□□ -2.09
SMSP52788 AP001836.1-201ENST00000604675 523 ntBASIC2□□□□□ -2.09
SMSP52788 AL627230.6-201ENST00000611129 280 ntBASIC2□□□□□ -2.09
SMSP52788 AC068792.1-201ENST00000621354 417 ntBASIC2□□□□□ -2.09
SMSP52788 MIR6863-201ENST00000636112 90 ntBASIC2□□□□□ -2.09
SMSP52788 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
SMSP52788 MTND4P1-201ENST00000457501 1466 ntBASIC2□□□□□ -2.09
SMSP52788 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
SMSP52788 KPNA2P1-201ENST00000458289 1591 ntBASIC1.99□□□□□ -2.09
SMSP52788 RNU6-1085P-201ENST00000363576 107 ntBASIC1.99□□□□□ -2.09
SMSP52788 Y_RNA.381-201ENST00000365666 102 ntBASIC1.99□□□□□ -2.09
SMSP52788 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SMSP52788 SNORA69-201ENST00000383895 132 ntBASIC1.99□□□□□ -2.09
SMSP52788 MIR221-201ENST00000385135 110 ntBASIC1.99□□□□□ -2.09
SMSP52788 RNA5SP219-201ENST00000390940 113 ntBASIC1.99□□□□□ -2.09
SMSP52788 AL079342.1-201ENST00000401460 267 ntBASIC1.99□□□□□ -2.09
SMSP52788 MIR1262-201ENST00000408276 93 ntBASIC1.99□□□□□ -2.09
SMSP52788 RNU6-648P-201ENST00000410190 107 ntBASIC1.99□□□□□ -2.09
SMSP52788 POLHP1-201ENST00000411806 470 ntBASIC1.99□□□□□ -2.09
SMSP52788 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.99□□□□□ -2.09
SMSP52788 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.99□□□□□ -2.09
SMSP52788 ARL5AP1-201ENST00000418991 388 ntBASIC1.99□□□□□ -2.09
SMSP52788 HMGN2P38-201ENST00000423806 265 ntBASIC1.99□□□□□ -2.09
SMSP52788 AL121601.2-201ENST00000438019 707 ntBASIC1.99□□□□□ -2.09
SMSP52788 RPL7P54-201ENST00000438336 674 ntBASIC1.99□□□□□ -2.09
SMSP52788 MTND2P29-201ENST00000438595 412 ntBASIC1.99□□□□□ -2.09
SMSP52788 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.99□□□□□ -2.09
SMSP52788 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.99□□□□□ -2.09
SMSP52788 AC025033.1-201ENST00000463883 194 ntBASIC1.99□□□□□ -2.09
SMSP52788 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.99□□□□□ -2.09
SMSP52788 AC107401.1-201ENST00000503426 685 ntBASIC1.99□□□□□ -2.09
SMSP52788 AC093534.1-201ENST00000504977 132 ntBASIC1.99□□□□□ -2.09
SMSP52788 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.99□□□□□ -2.09
SMSP52788 Y_RNA.676-201ENST00000516393 96 ntBASIC1.99□□□□□ -2.09
SMSP52788 RNU6-1069P-201ENST00000516612 133 ntBASIC1.99□□□□□ -2.09
SMSP52788 RNU1-40P-201ENST00000516816 164 ntBASIC1.99□□□□□ -2.09
SMSP52788 RNU1-97P-201ENST00000516872 164 ntBASIC1.99□□□□□ -2.09
SMSP52788 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.99□□□□□ -2.09
SMSP52788 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.99□□□□□ -2.09
SMSP52788 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.99□□□□□ -2.09
SMSP52788 AC005034.5-201ENST00000604219 466 ntBASIC1.99□□□□□ -2.09
SMSP52788 AC063943.3-201ENST00000615562 356 ntBASIC1.99□□□□□ -2.09
SMSP52788 AL158209.2-201ENST00000619266 216 ntBASIC1.99□□□□□ -2.09
SMSP52788 AC009487.4-201ENST00000624969 3585 ntBASIC1.99□□□□□ -2.09
SMSP52788 AL359851.1-201ENST00000569460 4997 ntBASIC1.99□□□□□ -2.09
SMSP52788 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
SMSP52788 RNU4-56P-201ENST00000364700 142 ntBASIC1.98□□□□□ -2.09
SMSP52788 RNU4-52P-201ENST00000384209 138 ntBASIC1.98□□□□□ -2.09
SMSP52788 SNORD14D-201ENST00000384390 87 ntBASIC1.98□□□□□ -2.09
SMSP52788 RNU6-1106P-201ENST00000390845 107 ntBASIC1.98□□□□□ -2.09
SMSP52788 RNA5SP465-201ENST00000391195 109 ntBASIC1.98□□□□□ -2.09
SMSP52788 MIR1294-201ENST00000408503 142 ntBASIC1.98□□□□□ -2.09
SMSP52788 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.98□□□□□ -2.09
SMSP52788 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
SMSP52788 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.98□□□□□ -2.09
SMSP52788 RPL23AP3-201ENST00000453844 468 ntBASIC1.98□□□□□ -2.09
SMSP52788 RNU6-717P-201ENST00000459076 104 ntBASIC1.98□□□□□ -2.09
SMSP52788 AC016632.1-201ENST00000503994 196 ntBASIC1.98□□□□□ -2.09
SMSP52788 RNA5SP401-201ENST00000515920 127 ntBASIC1.98□□□□□ -2.09
SMSP52788 RNA5SP200-201ENST00000516360 103 ntBASIC1.98□□□□□ -2.09
SMSP52788 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.98□□□□□ -2.09
SMSP52788 AC087854.1-201ENST00000519706 414 ntBASIC1.98□□□□□ -2.09
SMSP52788 HSPE1P4-201ENST00000550617 308 ntBASIC1.98□□□□□ -2.09
SMSP52788 TRAV32-201ENST00000553993 340 ntBASIC1.98□□□□□ -2.09
SMSP52788 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.98□□□□□ -2.09
SMSP52788 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.98□□□□□ -2.09
SMSP52788 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.98□□□□□ -2.09
SMSP52788 MIR4448-201ENST00000584360 86 ntBASIC1.98□□□□□ -2.09
SMSP52788 AC004908.3-201ENST00000610248 625 ntBASIC1.98□□□□□ -2.09
SMSP52788 MIR1248-201ENST00000629190 106 ntBASIC1.98□□□□□ -2.09
SMSP52788 OR5AK4P-201ENST00000635912 903 ntBASIC1.98□□□□□ -2.09
SMSP52788 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.98□□□□□ -2.09
SMSP52788 Y_RNA.99-201ENST00000363138 105 ntBASIC1.97□□□□□ -2.09
SMSP52788 Y_RNA.194-201ENST00000363985 102 ntBASIC1.97□□□□□ -2.09
SMSP52788 SNORA64-201ENST00000384674 134 ntBASIC1.97□□□□□ -2.09
SMSP52788 MIR514A2-201ENST00000385131 88 ntBASIC1.97□□□□□ -2.09
SMSP52788 MIR514A3-201ENST00000385132 88 ntBASIC1.97□□□□□ -2.09
SMSP52788 MIR1283-2-201ENST00000408621 87 ntBASIC1.97□□□□□ -2.09
SMSP52788 RNA5SP201-201ENST00000410316 124 ntBASIC1.97□□□□□ -2.09
SMSP52788 AL590135.1-201ENST00000422215 156 ntBASIC1.97□□□□□ -2.09
SMSP52788 AC096920.1-201ENST00000423991 241 ntBASIC1.97□□□□□ -2.09
SMSP52788 AC019205.3-201ENST00000424573 156 ntBASIC1.97□□□□□ -2.09
SMSP52788 AL603825.1-201ENST00000438481 80 ntBASIC1.97□□□□□ -2.09
SMSP52788 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.97□□□□□ -2.09
SMSP52788 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.97□□□□□ -2.09
SMSP52788 AC016700.2-201ENST00000446011 156 ntBASIC1.97□□□□□ -2.09
SMSP52788 PMCHL2-203ENST00000457791 237 ntBASIC1.97□□□□□ -2.09
SMSP52788 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.97□□□□□ -2.09
SMSP52788 AC015911.1-201ENST00000495111 156 ntBASIC1.97□□□□□ -2.09
SMSP52788 AC145146.1-201ENST00000496370 254 ntBASIC1.97□□□□□ -2.09
SMSP52788 Y_RNA.654-201ENST00000497848 106 ntBASIC1.97□□□□□ -2.09
SMSP52788 MRPS17P9-201ENST00000511924 393 ntBASIC1.97□□□□□ -2.09
SMSP52788 Y_RNA.693-201ENST00000516641 110 ntBASIC1.97□□□□□ -2.09
SMSP52788 AP000654.2-201ENST00000605633 586 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms