Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 RNU1-44P-201ENST00000384453 163 ntBASIC5.31□□□□□ -1.56
PRIM1P49642 SNORA1.3-201ENST00000384676 136 ntBASIC5.31□□□□□ -1.56
PRIM1P49642 MIR483-201ENST00000385070 76 ntBASIC5.31□□□□□ -1.56
PRIM1P49642 PTMAP5-201ENST00000393073 333 ntBASIC5.31□□□□□ -1.56
PRIM1P49642 RNU6-855P-201ENST00000410395 104 ntBASIC5.31□□□□□ -1.56
PRIM1P49642 TOMM22P1-201ENST00000418578 312 ntBASIC5.31□□□□□ -1.56
PRIM1P49642 AC146507.2-201ENST00000460608 476 ntBASIC5.31□□□□□ -1.56
PRIM1P49642 AC010469.1-201ENST00000463864 576 ntBASIC5.31□□□□□ -1.56
PRIM1P49642 RPL31P41-201ENST00000477967 372 ntBASIC5.31□□□□□ -1.56
PRIM1P49642 AIG1P1-201ENST00000503376 148 ntBASIC5.31□□□□□ -1.56
PRIM1P49642 SCARNA8-201ENST00000515924 131 ntBASIC5.31□□□□□ -1.56
PRIM1P49642 SNORA31.16-201ENST00000516773 139 ntBASIC5.31□□□□□ -1.56
PRIM1P49642 RNU6-1073P-201ENST00000517182 106 ntBASIC5.31□□□□□ -1.56
PRIM1P49642 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC5.31□□□□□ -1.56
PRIM1P49642 AC096577.2-201ENST00000611455 153 ntBASIC5.31□□□□□ -1.56
PRIM1P49642 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC5.31□□□□□ -1.56
PRIM1P49642 MAPK10-320ENST00000641462 6696 ntBASIC5.31□□□□□ -1.56
PRIM1P49642 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
PRIM1P49642 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.31□□□□□ -1.56
PRIM1P49642 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
PRIM1P49642 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
PRIM1P49642 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC5.3□□□□□ -1.56
PRIM1P49642 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.3□□□□□ -1.56
PRIM1P49642 SNORA5A-201ENST00000384111 134 ntBASIC5.3□□□□□ -1.56
PRIM1P49642 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC5.3□□□□□ -1.56
PRIM1P49642 HMGN2P10-201ENST00000448085 265 ntBASIC5.3□□□□□ -1.56
PRIM1P49642 AC245047.8-201ENST00000456455 284 ntBASIC5.3□□□□□ -1.56
PRIM1P49642 PPBPP1-201ENST00000510807 373 ntBASIC5.3□□□□□ -1.56
PRIM1P49642 SCARNA13-201ENST00000516672 275 ntBASIC5.3□□□□□ -1.56
PRIM1P49642 RNU6-453P-201ENST00000516819 85 ntBASIC5.3□□□□□ -1.56
PRIM1P49642 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC5.3□□□□□ -1.56
PRIM1P49642 AC105137.2-201ENST00000569073 466 ntBASIC5.3□□□□□ -1.56
PRIM1P49642 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC5.3□□□□□ -1.56
PRIM1P49642 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PRIM1P49642 MIR5684-201ENST00000585074 65 ntBASIC5.3□□□□□ -1.56
PRIM1P49642 AC068205.3-201ENST00000636385 468 ntBASIC5.3□□□□□ -1.56
PRIM1P49642 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PRIM1P49642 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
PRIM1P49642 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC5.3□□□□□ -1.56
PRIM1P49642 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
PRIM1P49642 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC5.29□□□□□ -1.56
PRIM1P49642 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
PRIM1P49642 RNU4-10P-201ENST00000364383 140 ntBASIC5.29□□□□□ -1.56
PRIM1P49642 Y_RNA.415-201ENST00000384012 112 ntBASIC5.29□□□□□ -1.56
PRIM1P49642 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC5.29□□□□□ -1.56
PRIM1P49642 AL606845.1-201ENST00000404881 255 ntBASIC5.29□□□□□ -1.56
PRIM1P49642 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC5.29□□□□□ -1.56
PRIM1P49642 AL135790.2-201ENST00000437701 267 ntBASIC5.29□□□□□ -1.56
PRIM1P49642 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC5.29□□□□□ -1.56
PRIM1P49642 AC006517.1-201ENST00000480485 328 ntBASIC5.29□□□□□ -1.56
PRIM1P49642 AC090142.3-201ENST00000519012 385 ntBASIC5.29□□□□□ -1.56
PRIM1P49642 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC5.29□□□□□ -1.56
PRIM1P49642 IGKV2OR2-8-201ENST00000558710 300 ntBASIC5.29□□□□□ -1.56
PRIM1P49642 AL773545.4-201ENST00000637262 310 ntBASIC5.29□□□□□ -1.56
PRIM1P49642 AL513478.4-201ENST00000641636 310 ntBASIC5.29□□□□□ -1.56
PRIM1P49642 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
PRIM1P49642 AL391516.1-201ENST00000554380 2449 ntBASIC5.29□□□□□ -1.56
PRIM1P49642 MAPK10-286ENST00000641208 8747 ntBASIC5.29□□□□□ -1.56
PRIM1P49642 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.29□□□□□ -1.56
PRIM1P49642 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.28□□□□□ -1.56
PRIM1P49642 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC5.28□□□□□ -1.56
PRIM1P49642 U3.9-201ENST00000363823 204 ntBASIC5.28□□□□□ -1.56
PRIM1P49642 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PRIM1P49642 RNU6-768P-201ENST00000384683 107 ntBASIC5.28□□□□□ -1.56
PRIM1P49642 MIR1179-201ENST00000408703 91 ntBASIC5.28□□□□□ -1.56
PRIM1P49642 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC5.28□□□□□ -1.56
PRIM1P49642 RPS27AP10-201ENST00000496103 208 ntBASIC5.28□□□□□ -1.56
PRIM1P49642 Y_RNA.694-201ENST00000516677 117 ntBASIC5.28□□□□□ -1.56
PRIM1P49642 CYCSP30-201ENST00000546447 172 ntBASIC5.28□□□□□ -1.56
PRIM1P49642 AC006199.1-201ENST00000548728 219 ntBASIC5.28□□□□□ -1.56
PRIM1P49642 AC069240.1-201ENST00000548774 375 ntBASIC5.28□□□□□ -1.56
PRIM1P49642 TCL6_2.1-201ENST00000615162 119 ntBASIC5.28□□□□□ -1.56
PRIM1P49642 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC5.28□□□□□ -1.56
PRIM1P49642 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PRIM1P49642 CENPCP1-201ENST00000533085 2578 ntBASIC5.28□□□□□ -1.56
PRIM1P49642 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
PRIM1P49642 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
PRIM1P49642 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
PRIM1P49642 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
PRIM1P49642 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PRIM1P49642 AL136964.1-201ENST00000622038 2990 ntBASIC5.28□□□□□ -1.56
PRIM1P49642 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
PRIM1P49642 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PRIM1P49642 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PRIM1P49642 SNORA60-201ENST00000362396 134 ntBASIC5.27□□□□□ -1.57
PRIM1P49642 Y_RNA.229-201ENST00000364347 113 ntBASIC5.27□□□□□ -1.57
PRIM1P49642 RNU6-915P-201ENST00000364943 103 ntBASIC5.27□□□□□ -1.57
PRIM1P49642 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.27□□□□□ -1.57
PRIM1P49642 MIR491-201ENST00000384877 84 ntBASIC5.27□□□□□ -1.57
PRIM1P49642 MIR493-201ENST00000385254 89 ntBASIC5.27□□□□□ -1.57
PRIM1P49642 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC5.27□□□□□ -1.57
PRIM1P49642 SNORA79-201ENST00000408376 140 ntBASIC5.27□□□□□ -1.57
PRIM1P49642 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC5.27□□□□□ -1.57
PRIM1P49642 RNU7-107P-201ENST00000459121 61 ntBASIC5.27□□□□□ -1.57
PRIM1P49642 AC084357.1-201ENST00000473404 255 ntBASIC5.27□□□□□ -1.57
PRIM1P49642 AC103975.1-201ENST00000482506 483 ntBASIC5.27□□□□□ -1.57
PRIM1P49642 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC5.27□□□□□ -1.57
PRIM1P49642 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC5.27□□□□□ -1.57
PRIM1P49642 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC5.27□□□□□ -1.57
PRIM1P49642 MIR3914-2-201ENST00000637339 95 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms