Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 RPL23AP94-201ENST00000512518 302 ntBASIC1.48□□□□□ -2.17
CX3CR1P49238 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.48□□□□□ -2.17
CX3CR1P49238 AL118558.2-201ENST00000556294 238 ntBASIC1.48□□□□□ -2.17
CX3CR1P49238 MIR4285-201ENST00000581001 85 ntBASIC1.48□□□□□ -2.17
CX3CR1P49238 MIR4424-201ENST00000585257 86 ntBASIC1.48□□□□□ -2.17
CX3CR1P49238 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.48□□□□□ -2.17
CX3CR1P49238 AC073648.5-201ENST00000603502 305 ntBASIC1.48□□□□□ -2.17
CX3CR1P49238 AC010900.2-201ENST00000604508 210 ntBASIC1.48□□□□□ -2.17
CX3CR1P49238 AP000654.2-201ENST00000605633 586 ntBASIC1.48□□□□□ -2.17
CX3CR1P49238 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.48□□□□□ -2.17
CX3CR1P49238 AC130454.1-201ENST00000622948 401 ntBASIC1.48□□□□□ -2.17
CX3CR1P49238 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.48□□□□□ -2.17
CX3CR1P49238 MIR126-201ENST00000362291 85 ntBASIC1.47□□□□□ -2.17
CX3CR1P49238 RNA5SP126-201ENST00000365092 109 ntBASIC1.47□□□□□ -2.17
CX3CR1P49238 RNU6-996P-201ENST00000365438 107 ntBASIC1.47□□□□□ -2.17
CX3CR1P49238 SNORD116-2-201ENST00000384274 95 ntBASIC1.47□□□□□ -2.17
CX3CR1P49238 RNU6-434P-201ENST00000384376 107 ntBASIC1.47□□□□□ -2.17
CX3CR1P49238 RNU6-160P-201ENST00000384591 107 ntBASIC1.47□□□□□ -2.17
CX3CR1P49238 SNORD116-6-201ENST00000384711 96 ntBASIC1.47□□□□□ -2.17
CX3CR1P49238 MIR23A-201ENST00000385245 73 ntBASIC1.47□□□□□ -2.17
CX3CR1P49238 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
CX3CR1P49238 Y_RNA.582-201ENST00000391023 95 ntBASIC1.47□□□□□ -2.17
CX3CR1P49238 SNORA12-201ENST00000391162 147 ntBASIC1.47□□□□□ -2.17
CX3CR1P49238 RNU2-29P-201ENST00000410423 189 ntBASIC1.47□□□□□ -2.17
CX3CR1P49238 RNU2-66P-201ENST00000410650 161 ntBASIC1.47□□□□□ -2.17
CX3CR1P49238 RNA5SP100-201ENST00000410903 110 ntBASIC1.47□□□□□ -2.17
CX3CR1P49238 RNA5SP59-201ENST00000410922 110 ntBASIC1.47□□□□□ -2.17
CX3CR1P49238 RNU6-293P-201ENST00000411259 106 ntBASIC1.47□□□□□ -2.17
CX3CR1P49238 AC073464.1-201ENST00000429823 534 ntBASIC1.47□□□□□ -2.17
CX3CR1P49238 AC002486.1-201ENST00000435098 391 ntBASIC1.47□□□□□ -2.17
CX3CR1P49238 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.47□□□□□ -2.17
CX3CR1P49238 AL035666.1-201ENST00000446195 348 ntBASIC1.47□□□□□ -2.17
CX3CR1P49238 HMGN2P23-201ENST00000456759 269 ntBASIC1.47□□□□□ -2.17
CX3CR1P49238 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.47□□□□□ -2.17
CX3CR1P49238 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.47□□□□□ -2.17
CX3CR1P49238 UBL5P3-201ENST00000475112 231 ntBASIC1.47□□□□□ -2.17
CX3CR1P49238 AC105417.1-201ENST00000514691 285 ntBASIC1.47□□□□□ -2.17
CX3CR1P49238 LRRC34P2-201ENST00000514850 553 ntBASIC1.47□□□□□ -2.17
CX3CR1P49238 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.47□□□□□ -2.17
CX3CR1P49238 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.47□□□□□ -2.17
CX3CR1P49238 COPS8P3-201ENST00000526024 482 ntBASIC1.47□□□□□ -2.17
CX3CR1P49238 AP001893.2-201ENST00000526949 202 ntBASIC1.47□□□□□ -2.17
CX3CR1P49238 AC115990.1-201ENST00000526957 301 ntBASIC1.47□□□□□ -2.17
CX3CR1P49238 AL137161.1-201ENST00000532231 390 ntBASIC1.47□□□□□ -2.17
CX3CR1P49238 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.47□□□□□ -2.17
CX3CR1P49238 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.47□□□□□ -2.17
CX3CR1P49238 TRAV32-201ENST00000553993 340 ntBASIC1.47□□□□□ -2.17
CX3CR1P49238 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.47□□□□□ -2.17
CX3CR1P49238 MIR4513-201ENST00000581077 86 ntBASIC1.47□□□□□ -2.17
CX3CR1P49238 AC103987.3-201ENST00000582071 292 ntBASIC1.47□□□□□ -2.17
CX3CR1P49238 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.47□□□□□ -2.17
CX3CR1P49238 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.47□□□□□ -2.17
CX3CR1P49238 AC007684.1-201ENST00000609671 477 ntBASIC1.47□□□□□ -2.17
CX3CR1P49238 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.47□□□□□ -2.17
CX3CR1P49238 AL354950.2-201ENST00000617939 290 ntBASIC1.47□□□□□ -2.17
CX3CR1P49238 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.47□□□□□ -2.17
CX3CR1P49238 AC241585.2-209ENST00000638217 143 ntBASIC1.47□□□□□ -2.17
CX3CR1P49238 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.47□□□□□ -2.17
CX3CR1P49238 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
CX3CR1P49238 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
CX3CR1P49238 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.46□□□□□ -2.18
CX3CR1P49238 CBX3P1-201ENST00000325243 554 ntBASIC1.46□□□□□ -2.18
CX3CR1P49238 Y_RNA.1-201ENST00000352915 104 ntBASIC1.46□□□□□ -2.18
CX3CR1P49238 RNU4-15P-201ENST00000362613 141 ntBASIC1.46□□□□□ -2.18
CX3CR1P49238 SNORD114-6-201ENST00000364393 72 ntBASIC1.46□□□□□ -2.18
CX3CR1P49238 RNU4-42P-201ENST00000364738 142 ntBASIC1.46□□□□□ -2.18
CX3CR1P49238 Y_RNA.399-201ENST00000383955 105 ntBASIC1.46□□□□□ -2.18
CX3CR1P49238 MIR934-201ENST00000401241 83 ntBASIC1.46□□□□□ -2.18
CX3CR1P49238 RNU6-1245P-201ENST00000411130 106 ntBASIC1.46□□□□□ -2.18
CX3CR1P49238 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.46□□□□□ -2.18
CX3CR1P49238 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.46□□□□□ -2.18
CX3CR1P49238 RNU7-63P-201ENST00000459054 62 ntBASIC1.46□□□□□ -2.18
CX3CR1P49238 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.46□□□□□ -2.18
CX3CR1P49238 AC091874.1-201ENST00000511402 339 ntBASIC1.46□□□□□ -2.18
CX3CR1P49238 MTND3P5-201ENST00000512798 333 ntBASIC1.46□□□□□ -2.18
CX3CR1P49238 RN7SKP298-201ENST00000515950 94 ntBASIC1.46□□□□□ -2.18
CX3CR1P49238 RNU6-377P-201ENST00000515965 102 ntBASIC1.46□□□□□ -2.18
CX3CR1P49238 RNU1-41P-201ENST00000516161 162 ntBASIC1.46□□□□□ -2.18
CX3CR1P49238 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.46□□□□□ -2.18
CX3CR1P49238 RNU1-48P-201ENST00000516400 162 ntBASIC1.46□□□□□ -2.18
CX3CR1P49238 RNU6-1038P-201ENST00000516516 104 ntBASIC1.46□□□□□ -2.18
CX3CR1P49238 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.46□□□□□ -2.18
CX3CR1P49238 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.46□□□□□ -2.18
CX3CR1P49238 AK6P1-201ENST00000540219 478 ntBASIC1.46□□□□□ -2.18
CX3CR1P49238 AC090115.3-201ENST00000553218 849 ntBASIC1.46□□□□□ -2.18
CX3CR1P49238 AC103996.1-201ENST00000555468 102 ntBASIC1.46□□□□□ -2.18
CX3CR1P49238 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.46□□□□□ -2.18
CX3CR1P49238 DEFB122-202ENST00000569013 197 ntBASIC1.46□□□□□ -2.18
CX3CR1P49238 MIR3169-201ENST00000578032 83 ntBASIC1.46□□□□□ -2.18
CX3CR1P49238 AC010928.2-201ENST00000588017 287 ntBASIC1.46□□□□□ -2.18
CX3CR1P49238 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.46□□□□□ -2.18
CX3CR1P49238 AC016925.2-201ENST00000605108 242 ntBASIC1.46□□□□□ -2.18
CX3CR1P49238 AC018889.1-201ENST00000605372 397 ntBASIC1.46□□□□□ -2.18
CX3CR1P49238 Z99129.1-201ENST00000612510 255 ntBASIC1.46□□□□□ -2.18
CX3CR1P49238 HULC.1-201ENST00000612720 240 ntBASIC1.46□□□□□ -2.18
CX3CR1P49238 AL590240.4-201ENST00000616908 390 ntBASIC1.46□□□□□ -2.18
CX3CR1P49238 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.46□□□□□ -2.18
CX3CR1P49238 AC005609.4-201ENST00000625071 447 ntBASIC1.46□□□□□ -2.18
CX3CR1P49238 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
CX3CR1P49238 SNORD32B-201ENST00000364460 84 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms