Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.88□□□□□ -1.63
CLCN1P35523 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLCN1P35523 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLCN1P35523 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
CLCN1P35523 MIR526A2-201ENST00000390198 65 ntBASIC4.88□□□□□ -1.63
CLCN1P35523 AL035461.1-201ENST00000421490 332 ntBASIC4.88□□□□□ -1.63
CLCN1P35523 HMGN2P20-201ENST00000437531 273 ntBASIC4.88□□□□□ -1.63
CLCN1P35523 HMGN2P16-201ENST00000456802 261 ntBASIC4.88□□□□□ -1.63
CLCN1P35523 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.88□□□□□ -1.63
CLCN1P35523 RN7SL738P-201ENST00000470264 297 ntBASIC4.88□□□□□ -1.63
CLCN1P35523 RNU6-1234P-201ENST00000516877 103 ntBASIC4.88□□□□□ -1.63
CLCN1P35523 RNU6-1231P-201ENST00000517185 103 ntBASIC4.88□□□□□ -1.63
CLCN1P35523 AC112693.2-201ENST00000556538 232 ntBASIC4.88□□□□□ -1.63
CLCN1P35523 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.88□□□□□ -1.63
CLCN1P35523 MIR378J-201ENST00000611988 109 ntBASIC4.88□□□□□ -1.63
CLCN1P35523 AC006133.1-201ENST00000617106 264 ntBASIC4.88□□□□□ -1.63
CLCN1P35523 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.88□□□□□ -1.63
CLCN1P35523 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLCN1P35523 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CLCN1P35523 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.88□□□□□ -1.63
CLCN1P35523 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CLCN1P35523 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.87□□□□□ -1.63
CLCN1P35523 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
CLCN1P35523 Y_RNA.172-201ENST00000363765 102 ntBASIC4.87□□□□□ -1.63
CLCN1P35523 RNU6-44P-201ENST00000384045 107 ntBASIC4.87□□□□□ -1.63
CLCN1P35523 Y_RNA.542-201ENST00000384641 111 ntBASIC4.87□□□□□ -1.63
CLCN1P35523 U8.12-201ENST00000384701 133 ntBASIC4.87□□□□□ -1.63
CLCN1P35523 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CLCN1P35523 Z98745.1-201ENST00000402553 494 ntBASIC4.87□□□□□ -1.63
CLCN1P35523 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC4.87□□□□□ -1.63
CLCN1P35523 RPS3P1-201ENST00000456781 192 ntBASIC4.87□□□□□ -1.63
CLCN1P35523 RNU7-141P-201ENST00000459304 62 ntBASIC4.87□□□□□ -1.63
CLCN1P35523 RPS29P2-201ENST00000479278 136 ntBASIC4.87□□□□□ -1.63
CLCN1P35523 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.87□□□□□ -1.63
CLCN1P35523 HSPE1P18-201ENST00000517602 280 ntBASIC4.87□□□□□ -1.63
CLCN1P35523 AL391903.3-201ENST00000612158 163 ntBASIC4.87□□□□□ -1.63
CLCN1P35523 AC002076.2-201ENST00000617362 122 ntBASIC4.87□□□□□ -1.63
CLCN1P35523 U6.115-201ENST00000636045 103 ntBASIC4.87□□□□□ -1.63
CLCN1P35523 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.87□□□□□ -1.63
CLCN1P35523 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
CLCN1P35523 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.87□□□□□ -1.63
CLCN1P35523 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.87□□□□□ -1.63
CLCN1P35523 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.87□□□□□ -1.63
CLCN1P35523 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLCN1P35523 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
CLCN1P35523 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLCN1P35523 AC010889.1-201ENST00000566193 2666 ntBASIC4.86□□□□□ -1.63
CLCN1P35523 U3.8-201ENST00000363675 217 ntBASIC4.86□□□□□ -1.63
CLCN1P35523 Y_RNA.310-201ENST00000365063 113 ntBASIC4.86□□□□□ -1.63
CLCN1P35523 MIR659-201ENST00000384963 97 ntBASIC4.86□□□□□ -1.63
CLCN1P35523 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CLCN1P35523 MIR1911-201ENST00000410783 80 ntBASIC4.86□□□□□ -1.63
CLCN1P35523 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.86□□□□□ -1.63
CLCN1P35523 AL714022.1-201ENST00000439897 151 ntBASIC4.86□□□□□ -1.63
CLCN1P35523 PPIAP15-201ENST00000479662 484 ntBASIC4.86□□□□□ -1.63
CLCN1P35523 RNU6-919P-201ENST00000516731 104 ntBASIC4.86□□□□□ -1.63
CLCN1P35523 RN7SL690P-201ENST00000582087 240 ntBASIC4.86□□□□□ -1.63
CLCN1P35523 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC4.86□□□□□ -1.63
CLCN1P35523 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.86□□□□□ -1.63
CLCN1P35523 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
CLCN1P35523 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLCN1P35523 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CLCN1P35523 AC125257.1-201ENST00000560400 2930 ntBASIC4.86□□□□□ -1.63
CLCN1P35523 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CLCN1P35523 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CLCN1P35523 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.85□□□□□ -1.63
CLCN1P35523 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CLCN1P35523 RNU6-655P-201ENST00000362858 107 ntBASIC4.85□□□□□ -1.63
CLCN1P35523 RNU6-1210P-201ENST00000363775 107 ntBASIC4.85□□□□□ -1.63
CLCN1P35523 MIR15B-201ENST00000385045 98 ntBASIC4.85□□□□□ -1.63
CLCN1P35523 HMGN2P8-201ENST00000391458 268 ntBASIC4.85□□□□□ -1.63
CLCN1P35523 AL139281.1-201ENST00000422120 335 ntBASIC4.85□□□□□ -1.63
CLCN1P35523 RPL32P34-201ENST00000486380 400 ntBASIC4.85□□□□□ -1.63
CLCN1P35523 SRIP1-201ENST00000489235 288 ntBASIC4.85□□□□□ -1.63
CLCN1P35523 SNORA70.12-201ENST00000516084 153 ntBASIC4.85□□□□□ -1.63
CLCN1P35523 IGKV1-32-201ENST00000519290 311 ntBASIC4.85□□□□□ -1.63
CLCN1P35523 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.85□□□□□ -1.63
CLCN1P35523 TUG1_4.1-201ENST00000619464 181 ntBASIC4.85□□□□□ -1.63
CLCN1P35523 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CLCN1P35523 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CLCN1P35523 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CLCN1P35523 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CLCN1P35523 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
CLCN1P35523 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.84□□□□□ -1.63
CLCN1P35523 RNU6-407P-201ENST00000365280 104 ntBASIC4.84□□□□□ -1.63
CLCN1P35523 MIR298-201ENST00000401212 88 ntBASIC4.84□□□□□ -1.63
CLCN1P35523 SNORA11-201ENST00000408789 128 ntBASIC4.84□□□□□ -1.63
CLCN1P35523 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC4.84□□□□□ -1.63
CLCN1P35523 AP002884.2-201ENST00000471647 395 ntBASIC4.84□□□□□ -1.63
CLCN1P35523 AP000867.2-201ENST00000532468 320 ntBASIC4.84□□□□□ -1.63
CLCN1P35523 AC074050.1-201ENST00000563247 211 ntBASIC4.84□□□□□ -1.63
CLCN1P35523 AF117829.1-206ENST00000621883 3802 ntBASIC4.84□□□□□ -1.63
CLCN1P35523 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CLCN1P35523 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CLCN1P35523 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CLCN1P35523 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.84□□□□□ -1.64
CLCN1P35523 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC4.84□□□□□ -1.64
CLCN1P35523 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CLCN1P35523 MIR367-201ENST00000362299 68 ntBASIC4.83□□□□□ -1.64
CLCN1P35523 RNU6-643P-201ENST00000384018 107 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms