Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 RPL22P13-201ENST00000493291 347 ntBASIC2.97□□□□□ -1.93
HOXD12P35452 AC114801.2-201ENST00000503825 781 ntBASIC2.97□□□□□ -1.93
HOXD12P35452 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.97□□□□□ -1.93
HOXD12P35452 AC023141.11-201ENST00000508864 202 ntBASIC2.97□□□□□ -1.93
HOXD12P35452 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.97□□□□□ -1.93
HOXD12P35452 RNU6-120P-201ENST00000516077 103 ntBASIC2.97□□□□□ -1.93
HOXD12P35452 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.97□□□□□ -1.93
HOXD12P35452 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.97□□□□□ -1.93
HOXD12P35452 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.97□□□□□ -1.93
HOXD12P35452 SNRPGP18-201ENST00000553000 214 ntBASIC2.97□□□□□ -1.93
HOXD12P35452 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.97□□□□□ -1.93
HOXD12P35452 MIR8076-201ENST00000611401 83 ntBASIC2.97□□□□□ -1.93
HOXD12P35452 AC091903.1-201ENST00000624322 454 ntBASIC2.97□□□□□ -1.93
HOXD12P35452 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.97□□□□□ -1.93
HOXD12P35452 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HOXD12P35452 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.97□□□□□ -1.93
HOXD12P35452 AC108206.1-201ENST00000570186 4159 ntBASIC2.97□□□□□ -1.93
HOXD12P35452 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HOXD12P35452 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
HOXD12P35452 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HOXD12P35452 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.96□□□□□ -1.94
HOXD12P35452 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HOXD12P35452 Y_RNA.31-201ENST00000362574 102 ntBASIC2.96□□□□□ -1.94
HOXD12P35452 MIR181B1-201ENST00000385240 110 ntBASIC2.96□□□□□ -1.94
HOXD12P35452 RNU6-308P-201ENST00000390957 107 ntBASIC2.96□□□□□ -1.94
HOXD12P35452 AL139095.1-201ENST00000404326 391 ntBASIC2.96□□□□□ -1.94
HOXD12P35452 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.96□□□□□ -1.94
HOXD12P35452 OOSP1P1-201ENST00000423265 274 ntBASIC2.96□□□□□ -1.94
HOXD12P35452 AC104389.3-201ENST00000445629 235 ntBASIC2.96□□□□□ -1.94
HOXD12P35452 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.96□□□□□ -1.94
HOXD12P35452 AC022493.2-201ENST00000506122 481 ntBASIC2.96□□□□□ -1.94
HOXD12P35452 SMURF2P1-201ENST00000514992 481 ntBASIC2.96□□□□□ -1.94
HOXD12P35452 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.96□□□□□ -1.94
HOXD12P35452 SCARNA3-201ENST00000517097 143 ntBASIC2.96□□□□□ -1.94
HOXD12P35452 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HOXD12P35452 ELOCP31-201ENST00000540463 467 ntBASIC2.96□□□□□ -1.94
HOXD12P35452 CR383656.8-201ENST00000549046 145 ntBASIC2.96□□□□□ -1.94
HOXD12P35452 MIR3199-1-201ENST00000582434 88 ntBASIC2.96□□□□□ -1.94
HOXD12P35452 AC023043.3-201ENST00000593113 385 ntBASIC2.96□□□□□ -1.94
HOXD12P35452 AC022432.1-201ENST00000595739 310 ntBASIC2.96□□□□□ -1.94
HOXD12P35452 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
HOXD12P35452 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.95□□□□□ -1.94
HOXD12P35452 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.95□□□□□ -1.94
HOXD12P35452 AL359854.1-201ENST00000614203 1594 ntBASIC2.95□□□□□ -1.94
HOXD12P35452 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
HOXD12P35452 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.95□□□□□ -1.94
HOXD12P35452 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HOXD12P35452 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
HOXD12P35452 SNORD56.1-201ENST00000362913 68 ntBASIC2.95□□□□□ -1.94
HOXD12P35452 VTRNA1-1-201ENST00000363120 99 ntBASIC2.95□□□□□ -1.94
HOXD12P35452 SNORA9.2-201ENST00000365361 133 ntBASIC2.95□□□□□ -1.94
HOXD12P35452 AL591034.2-201ENST00000402839 359 ntBASIC2.95□□□□□ -1.94
HOXD12P35452 RPL32P35-201ENST00000415214 394 ntBASIC2.95□□□□□ -1.94
HOXD12P35452 AC074117.2-201ENST00000417130 397 ntBASIC2.95□□□□□ -1.94
HOXD12P35452 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.95□□□□□ -1.94
HOXD12P35452 AL137792.2-201ENST00000443484 235 ntBASIC2.95□□□□□ -1.94
HOXD12P35452 AC012308.1-201ENST00000451232 178 ntBASIC2.95□□□□□ -1.94
HOXD12P35452 AL109933.2-201ENST00000452651 260 ntBASIC2.95□□□□□ -1.94
HOXD12P35452 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.95□□□□□ -1.94
HOXD12P35452 AL163540.1-201ENST00000485382 386 ntBASIC2.95□□□□□ -1.94
HOXD12P35452 AC068781.1-201ENST00000488231 618 ntBASIC2.95□□□□□ -1.94
HOXD12P35452 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.95□□□□□ -1.94
HOXD12P35452 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.95□□□□□ -1.94
HOXD12P35452 SCGB1D5P-201ENST00000515134 247 ntBASIC2.95□□□□□ -1.94
HOXD12P35452 RNA5SP112-201ENST00000515937 99 ntBASIC2.95□□□□□ -1.94
HOXD12P35452 RNU6-976P-201ENST00000516086 111 ntBASIC2.95□□□□□ -1.94
HOXD12P35452 SNORA31.6-201ENST00000516241 130 ntBASIC2.95□□□□□ -1.94
HOXD12P35452 ACA59.2-201ENST00000517061 156 ntBASIC2.95□□□□□ -1.94
HOXD12P35452 RNU6-264P-201ENST00000517134 104 ntBASIC2.95□□□□□ -1.94
HOXD12P35452 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.95□□□□□ -1.94
HOXD12P35452 AC009163.5-201ENST00000575421 637 ntBASIC2.95□□□□□ -1.94
HOXD12P35452 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.95□□□□□ -1.94
HOXD12P35452 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
HOXD12P35452 VN1R107P-201ENST00000601784 209 ntBASIC2.95□□□□□ -1.94
HOXD12P35452 AC078795.3-201ENST00000602913 472 ntBASIC2.95□□□□□ -1.94
HOXD12P35452 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
HOXD12P35452 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.94□□□□□ -1.94
HOXD12P35452 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
HOXD12P35452 Y_RNA.5-201ENST00000362334 102 ntBASIC2.94□□□□□ -1.94
HOXD12P35452 RNU4-82P-201ENST00000362443 140 ntBASIC2.94□□□□□ -1.94
HOXD12P35452 RNU6-1115P-201ENST00000362490 106 ntBASIC2.94□□□□□ -1.94
HOXD12P35452 RNU6-227P-201ENST00000362865 103 ntBASIC2.94□□□□□ -1.94
HOXD12P35452 Y_RNA.202-201ENST00000364083 110 ntBASIC2.94□□□□□ -1.94
HOXD12P35452 Y_RNA.463-201ENST00000384271 102 ntBASIC2.94□□□□□ -1.94
HOXD12P35452 SNORA41-201ENST00000384675 132 ntBASIC2.94□□□□□ -1.94
HOXD12P35452 RNU6-1245P-201ENST00000411130 106 ntBASIC2.94□□□□□ -1.94
HOXD12P35452 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
HOXD12P35452 AC243428.1-201ENST00000421099 264 ntBASIC2.94□□□□□ -1.94
HOXD12P35452 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.94□□□□□ -1.94
HOXD12P35452 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.94□□□□□ -1.94
HOXD12P35452 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.94□□□□□ -1.94
HOXD12P35452 EEF1B2P7-201ENST00000451177 676 ntBASIC2.94□□□□□ -1.94
HOXD12P35452 RPS29P27-201ENST00000463711 170 ntBASIC2.94□□□□□ -1.94
HOXD12P35452 MED28P2-201ENST00000475771 317 ntBASIC2.94□□□□□ -1.94
HOXD12P35452 AC103975.1-201ENST00000482506 483 ntBASIC2.94□□□□□ -1.94
HOXD12P35452 Y_RNA.661-201ENST00000516003 99 ntBASIC2.94□□□□□ -1.94
HOXD12P35452 Y_RNA.711-201ENST00000516993 102 ntBASIC2.94□□□□□ -1.94
HOXD12P35452 RNU6-699P-201ENST00000517081 110 ntBASIC2.94□□□□□ -1.94
HOXD12P35452 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.94□□□□□ -1.94
HOXD12P35452 BNIP3P16-201ENST00000589779 534 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms