Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SLC6A4P31645 RNA5SP383-201ENST00000362934 120 ntBASIC3.17□□□□□ -1.9
SLC6A4P31645 Y_RNA.276-201ENST00000364732 109 ntBASIC3.17□□□□□ -1.9
SLC6A4P31645 RNU6-622P-201ENST00000384272 103 ntBASIC3.17□□□□□ -1.9
SLC6A4P31645 RNA5SP293-201ENST00000410527 113 ntBASIC3.17□□□□□ -1.9
SLC6A4P31645 RN7SKP220-201ENST00000410611 288 ntBASIC3.17□□□□□ -1.9
SLC6A4P31645 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.17□□□□□ -1.9
SLC6A4P31645 AC114482.1-201ENST00000418010 247 ntBASIC3.17□□□□□ -1.9
SLC6A4P31645 RPS12P18-201ENST00000442381 270 ntBASIC3.17□□□□□ -1.9
SLC6A4P31645 U8.20-201ENST00000459445 131 ntBASIC3.17□□□□□ -1.9
SLC6A4P31645 RNU7-169P-201ENST00000459456 61 ntBASIC3.17□□□□□ -1.9
SLC6A4P31645 AP001025.1-201ENST00000486139 332 ntBASIC3.17□□□□□ -1.9
SLC6A4P31645 AC007375.1-201ENST00000554513 578 ntBASIC3.17□□□□□ -1.9
SLC6A4P31645 AC025281.1-201ENST00000567026 265 ntBASIC3.17□□□□□ -1.9
SLC6A4P31645 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.17□□□□□ -1.9
SLC6A4P31645 AC091152.3-201ENST00000604227 325 ntBASIC3.17□□□□□ -1.9
SLC6A4P31645 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SLC6A4P31645 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
SLC6A4P31645 AC073325.2-201ENST00000339545 159 ntBASIC3.16□□□□□ -1.9
SLC6A4P31645 Y_RNA.47-201ENST00000362697 108 ntBASIC3.16□□□□□ -1.9
SLC6A4P31645 Y_RNA.106-201ENST00000363189 100 ntBASIC3.16□□□□□ -1.9
SLC6A4P31645 Y_RNA.401-201ENST00000383965 117 ntBASIC3.16□□□□□ -1.9
SLC6A4P31645 Y_RNA.452-201ENST00000384202 108 ntBASIC3.16□□□□□ -1.9
SLC6A4P31645 Y_RNA.556-201ENST00000384677 113 ntBASIC3.16□□□□□ -1.9
SLC6A4P31645 Y_RNA.574-201ENST00000384766 95 ntBASIC3.16□□□□□ -1.9
SLC6A4P31645 MIR153-2-201ENST00000385225 87 ntBASIC3.16□□□□□ -1.9
SLC6A4P31645 RNU6-750P-201ENST00000390946 107 ntBASIC3.16□□□□□ -1.9
SLC6A4P31645 RNA5SP252-201ENST00000391131 119 ntBASIC3.16□□□□□ -1.9
SLC6A4P31645 RNU1-101P-201ENST00000391171 127 ntBASIC3.16□□□□□ -1.9
SLC6A4P31645 MTCO3P29-201ENST00000432119 779 ntBASIC3.16□□□□□ -1.9
SLC6A4P31645 MTATP8P1-201ENST00000467115 207 ntBASIC3.16□□□□□ -1.9
SLC6A4P31645 RPL23AP75-201ENST00000491601 451 ntBASIC3.16□□□□□ -1.9
SLC6A4P31645 MRPS35P2-201ENST00000508242 191 ntBASIC3.16□□□□□ -1.9
SLC6A4P31645 RNU6-635P-201ENST00000516651 102 ntBASIC3.16□□□□□ -1.9
SLC6A4P31645 SNORD59.2-201ENST00000516873 68 ntBASIC3.16□□□□□ -1.9
SLC6A4P31645 HSPE1P4-201ENST00000550617 308 ntBASIC3.16□□□□□ -1.9
SLC6A4P31645 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.16□□□□□ -1.9
SLC6A4P31645 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.16□□□□□ -1.9
SLC6A4P31645 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.16□□□□□ -1.9
SLC6A4P31645 MIR5571-201ENST00000577998 113 ntBASIC3.16□□□□□ -1.9
SLC6A4P31645 MIR3124-201ENST00000582636 67 ntBASIC3.16□□□□□ -1.9
SLC6A4P31645 AL390123.1-201ENST00000603216 237 ntBASIC3.16□□□□□ -1.9
SLC6A4P31645 AC096772.1-201ENST00000609146 564 ntBASIC3.16□□□□□ -1.9
SLC6A4P31645 AC107294.3-201ENST00000609211 526 ntBASIC3.16□□□□□ -1.9
SLC6A4P31645 AC006386.2-201ENST00000624491 75 ntBASIC3.16□□□□□ -1.9
SLC6A4P31645 AC012005.1-201ENST00000624575 75 ntBASIC3.16□□□□□ -1.9
SLC6A4P31645 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.16□□□□□ -1.9
SLC6A4P31645 RBBP8P1-201ENST00000449447 1844 ntBASIC3.16□□□□□ -1.9
SLC6A4P31645 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.16□□□□□ -1.9
SLC6A4P31645 AC010889.1-201ENST00000566193 2666 ntBASIC3.16□□□□□ -1.9
SLC6A4P31645 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
SLC6A4P31645 RNU1-105P-201ENST00000363470 161 ntBASIC3.15□□□□□ -1.91
SLC6A4P31645 SNORD56.3-201ENST00000363507 71 ntBASIC3.15□□□□□ -1.91
SLC6A4P31645 RNY3P11-201ENST00000364153 102 ntBASIC3.15□□□□□ -1.91
SLC6A4P31645 RNU6-450P-201ENST00000364654 107 ntBASIC3.15□□□□□ -1.91
SLC6A4P31645 RNU6-17P-201ENST00000384245 107 ntBASIC3.15□□□□□ -1.91
SLC6A4P31645 RNU6-18P-201ENST00000384527 107 ntBASIC3.15□□□□□ -1.91
SLC6A4P31645 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
SLC6A4P31645 RPL21P40-201ENST00000428586 483 ntBASIC3.15□□□□□ -1.91
SLC6A4P31645 IPO7P1-201ENST00000442031 636 ntBASIC3.15□□□□□ -1.91
SLC6A4P31645 GPM6BP3-201ENST00000442797 145 ntBASIC3.15□□□□□ -1.91
SLC6A4P31645 AC009296.1-201ENST00000443146 155 ntBASIC3.15□□□□□ -1.91
SLC6A4P31645 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.15□□□□□ -1.91
SLC6A4P31645 RPL39P29-201ENST00000447779 157 ntBASIC3.15□□□□□ -1.91
SLC6A4P31645 OR2AQ1P-201ENST00000451972 200 ntBASIC3.15□□□□□ -1.91
SLC6A4P31645 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.15□□□□□ -1.91
SLC6A4P31645 ANXA2P1-201ENST00000505539 926 ntBASIC3.15□□□□□ -1.91
SLC6A4P31645 RNA5SP217-201ENST00000515959 91 ntBASIC3.15□□□□□ -1.91
SLC6A4P31645 SNORA64.4-201ENST00000516632 81 ntBASIC3.15□□□□□ -1.91
SLC6A4P31645 AC131281.1-201ENST00000522984 164 ntBASIC3.15□□□□□ -1.91
SLC6A4P31645 MRPS36P4-201ENST00000534436 298 ntBASIC3.15□□□□□ -1.91
SLC6A4P31645 AC021231.3-201ENST00000558497 370 ntBASIC3.15□□□□□ -1.91
SLC6A4P31645 AC105137.2-201ENST00000569073 466 ntBASIC3.15□□□□□ -1.91
SLC6A4P31645 AC099778.2-201ENST00000610904 211 ntBASIC3.15□□□□□ -1.91
SLC6A4P31645 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.15□□□□□ -1.91
SLC6A4P31645 U4.1-201ENST00000620349 87 ntBASIC3.15□□□□□ -1.91
SLC6A4P31645 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
SLC6A4P31645 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SLC6A4P31645 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SLC6A4P31645 AL365361.1-201ENST00000566942 3481 ntBASIC3.14□□□□□ -1.91
SLC6A4P31645 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
SLC6A4P31645 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SLC6A4P31645 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SLC6A4P31645 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.14□□□□□ -1.91
SLC6A4P31645 MIR22-201ENST00000362190 85 ntBASIC3.14□□□□□ -1.91
SLC6A4P31645 Y_RNA.27-201ENST00000362540 103 ntBASIC3.14□□□□□ -1.91
SLC6A4P31645 RNU1-76P-201ENST00000362903 159 ntBASIC3.14□□□□□ -1.91
SLC6A4P31645 RNU6-137P-201ENST00000363680 108 ntBASIC3.14□□□□□ -1.91
SLC6A4P31645 SNORA71.1-201ENST00000364523 117 ntBASIC3.14□□□□□ -1.91
SLC6A4P31645 SNORA51.11-201ENST00000384442 131 ntBASIC3.14□□□□□ -1.91
SLC6A4P31645 SNORA44-201ENST00000384584 132 ntBASIC3.14□□□□□ -1.91
SLC6A4P31645 MIR147B-201ENST00000390185 80 ntBASIC3.14□□□□□ -1.91
SLC6A4P31645 RNU2-49P-201ENST00000410666 184 ntBASIC3.14□□□□□ -1.91
SLC6A4P31645 CYCSP48-201ENST00000417124 323 ntBASIC3.14□□□□□ -1.91
SLC6A4P31645 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.14□□□□□ -1.91
SLC6A4P31645 AC244670.1-201ENST00000436879 112 ntBASIC3.14□□□□□ -1.91
SLC6A4P31645 RPL23AP22-201ENST00000437556 453 ntBASIC3.14□□□□□ -1.91
SLC6A4P31645 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.14□□□□□ -1.91
SLC6A4P31645 AC010655.3-201ENST00000478818 450 ntBASIC3.14□□□□□ -1.91
SLC6A4P31645 RN7SL20P-201ENST00000488827 297 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms