Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
RXRBP28702 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
RXRBP28702 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
RXRBP28702 LINC02471-203ENST00000641941 4752 ntBASIC4.33□□□□□ -1.72
RXRBP28702 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.33□□□□□ -1.72
RXRBP28702 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RXRBP28702 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RXRBP28702 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
RXRBP28702 UBE2WP1-201ENST00000362030 340 ntBASIC4.33□□□□□ -1.72
RXRBP28702 Y_RNA.418-201ENST00000384029 102 ntBASIC4.33□□□□□ -1.72
RXRBP28702 Y_RNA.435-201ENST00000384095 112 ntBASIC4.33□□□□□ -1.72
RXRBP28702 Y_RNA.446-201ENST00000384178 104 ntBASIC4.33□□□□□ -1.72
RXRBP28702 RNU6-166P-201ENST00000384371 107 ntBASIC4.33□□□□□ -1.72
RXRBP28702 RNU1-89P-201ENST00000384592 164 ntBASIC4.33□□□□□ -1.72
RXRBP28702 RNU2-61P-201ENST00000411069 191 ntBASIC4.33□□□□□ -1.72
RXRBP28702 BMS1P22-201ENST00000414726 313 ntBASIC4.33□□□□□ -1.72
RXRBP28702 AC016700.2-201ENST00000446011 156 ntBASIC4.33□□□□□ -1.72
RXRBP28702 SNORD2.1-201ENST00000458762 69 ntBASIC4.33□□□□□ -1.72
RXRBP28702 snoU13.15-201ENST00000459407 104 ntBASIC4.33□□□□□ -1.72
RXRBP28702 AP001324.2-201ENST00000461163 319 ntBASIC4.33□□□□□ -1.72
RXRBP28702 AC087477.1-201ENST00000465747 340 ntBASIC4.33□□□□□ -1.72
RXRBP28702 RPL26P26-201ENST00000480251 434 ntBASIC4.33□□□□□ -1.72
RXRBP28702 AL049874.1-201ENST00000489560 388 ntBASIC4.33□□□□□ -1.72
RXRBP28702 AC025554.1-201ENST00000505641 188 ntBASIC4.33□□□□□ -1.72
RXRBP28702 MIR2114-201ENST00000516645 80 ntBASIC4.33□□□□□ -1.72
RXRBP28702 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC4.33□□□□□ -1.72
RXRBP28702 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.33□□□□□ -1.72
RXRBP28702 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC4.33□□□□□ -1.72
RXRBP28702 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.33□□□□□ -1.72
RXRBP28702 U4.7-201ENST00000638126 106 ntBASIC4.33□□□□□ -1.72
RXRBP28702 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RXRBP28702 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
RXRBP28702 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RXRBP28702 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
RXRBP28702 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
RXRBP28702 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
RXRBP28702 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.32□□□□□ -1.72
RXRBP28702 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.32□□□□□ -1.72
RXRBP28702 RNU6-923P-201ENST00000364753 107 ntBASIC4.32□□□□□ -1.72
RXRBP28702 RNU4-9P-201ENST00000364951 139 ntBASIC4.32□□□□□ -1.72
RXRBP28702 Y_RNA.441-201ENST00000384123 112 ntBASIC4.32□□□□□ -1.72
RXRBP28702 SNORA7.4-201ENST00000384249 137 ntBASIC4.32□□□□□ -1.72
RXRBP28702 RNU6-959P-201ENST00000384671 107 ntBASIC4.32□□□□□ -1.72
RXRBP28702 Y_RNA.569-201ENST00000384749 103 ntBASIC4.32□□□□□ -1.72
RXRBP28702 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
RXRBP28702 Y_RNA.590-201ENST00000410140 107 ntBASIC4.32□□□□□ -1.72
RXRBP28702 RNU5E-9P-201ENST00000411164 104 ntBASIC4.32□□□□□ -1.72
RXRBP28702 RPS6P12-201ENST00000432491 726 ntBASIC4.32□□□□□ -1.72
RXRBP28702 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.32□□□□□ -1.72
RXRBP28702 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC4.32□□□□□ -1.72
RXRBP28702 SNORA31.18-201ENST00000517043 134 ntBASIC4.32□□□□□ -1.72
RXRBP28702 AC027288.2-201ENST00000553028 243 ntBASIC4.32□□□□□ -1.72
RXRBP28702 AC002545.1-201ENST00000592511 181 ntBASIC4.32□□□□□ -1.72
RXRBP28702 RPL23AP88-201ENST00000605759 454 ntBASIC4.32□□□□□ -1.72
RXRBP28702 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.32□□□□□ -1.72
RXRBP28702 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC4.32□□□□□ -1.72
RXRBP28702 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RXRBP28702 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.32□□□□□ -1.72
RXRBP28702 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.32□□□□□ -1.72
RXRBP28702 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.32□□□□□ -1.72
RXRBP28702 AL672296.1-201ENST00000427780 2158 ntBASIC4.31□□□□□ -1.72
RXRBP28702 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
RXRBP28702 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.31□□□□□ -1.72
RXRBP28702 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RXRBP28702 RNU6-1074P-201ENST00000383995 104 ntBASIC4.31□□□□□ -1.72
RXRBP28702 RPS4XP3-201ENST00000398541 413 ntBASIC4.31□□□□□ -1.72
RXRBP28702 ANP32BP2-201ENST00000454525 545 ntBASIC4.31□□□□□ -1.72
RXRBP28702 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC4.31□□□□□ -1.72
RXRBP28702 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC4.31□□□□□ -1.72
RXRBP28702 RPL23AP75-201ENST00000491601 451 ntBASIC4.31□□□□□ -1.72
RXRBP28702 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC4.31□□□□□ -1.72
RXRBP28702 RNU6-479P-201ENST00000516348 105 ntBASIC4.31□□□□□ -1.72
RXRBP28702 AK6P2-201ENST00000549020 471 ntBASIC4.31□□□□□ -1.72
RXRBP28702 FAM60BP-201ENST00000578364 658 ntBASIC4.31□□□□□ -1.72
RXRBP28702 SCARNA4-201ENST00000629045 128 ntBASIC4.31□□□□□ -1.72
RXRBP28702 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
RXRBP28702 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
RXRBP28702 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC4.31□□□□□ -1.72
RXRBP28702 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
RXRBP28702 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RXRBP28702 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
RXRBP28702 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RXRBP28702 RNU6-335P-201ENST00000364563 113 ntBASIC4.3□□□□□ -1.72
RXRBP28702 AL138878.1-201ENST00000405131 347 ntBASIC4.3□□□□□ -1.72
RXRBP28702 RN7SKP220-201ENST00000410611 288 ntBASIC4.3□□□□□ -1.72
RXRBP28702 AC009296.1-201ENST00000443146 155 ntBASIC4.3□□□□□ -1.72
RXRBP28702 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.3□□□□□ -1.72
RXRBP28702 snoU13.23-201ENST00000458863 104 ntBASIC4.3□□□□□ -1.72
RXRBP28702 AC073901.1-201ENST00000462471 408 ntBASIC4.3□□□□□ -1.72
RXRBP28702 AP001025.1-201ENST00000486139 332 ntBASIC4.3□□□□□ -1.72
RXRBP28702 AC139453.3-201ENST00000493276 369 ntBASIC4.3□□□□□ -1.72
RXRBP28702 AC091959.1-201ENST00000495857 238 ntBASIC4.3□□□□□ -1.72
RXRBP28702 AC008413.1-201ENST00000511864 177 ntBASIC4.3□□□□□ -1.72
RXRBP28702 RNU6-377P-201ENST00000515965 102 ntBASIC4.3□□□□□ -1.72
RXRBP28702 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.3□□□□□ -1.72
RXRBP28702 AL645944.1-201ENST00000603857 493 ntBASIC4.3□□□□□ -1.72
RXRBP28702 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RXRBP28702 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC4.29□□□□□ -1.72
RXRBP28702 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RXRBP28702 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms