Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 MTND4P32-201ENST00000437189 1237 ntBASIC1.22□□□□□ -2.21
HLA-DMAP28067 MTND1P26-201ENST00000440488 538 ntBASIC1.22□□□□□ -2.21
HLA-DMAP28067 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.22□□□□□ -2.21
HLA-DMAP28067 C1DP4-201ENST00000455429 424 ntBASIC1.22□□□□□ -2.21
HLA-DMAP28067 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.22□□□□□ -2.21
HLA-DMAP28067 AC005908.1-201ENST00000468701 347 ntBASIC1.22□□□□□ -2.21
HLA-DMAP28067 AC132942.1-201ENST00000486753 483 ntBASIC1.22□□□□□ -2.21
HLA-DMAP28067 MTND2P33-201ENST00000506452 1031 ntBASIC1.22□□□□□ -2.21
HLA-DMAP28067 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.22□□□□□ -2.21
HLA-DMAP28067 AC091874.1-201ENST00000511402 339 ntBASIC1.22□□□□□ -2.21
HLA-DMAP28067 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.22□□□□□ -2.21
HLA-DMAP28067 MTND3P5-201ENST00000512798 333 ntBASIC1.22□□□□□ -2.21
HLA-DMAP28067 RNU6-902P-201ENST00000517212 91 ntBASIC1.22□□□□□ -2.21
HLA-DMAP28067 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
HLA-DMAP28067 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.22□□□□□ -2.21
HLA-DMAP28067 AC103996.1-201ENST00000555468 102 ntBASIC1.22□□□□□ -2.21
HLA-DMAP28067 MIR4528-201ENST00000577763 90 ntBASIC1.22□□□□□ -2.21
HLA-DMAP28067 MTATP6P3-201ENST00000581686 676 ntBASIC1.22□□□□□ -2.21
HLA-DMAP28067 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.22□□□□□ -2.21
HLA-DMAP28067 AC107304.1-201ENST00000604229 296 ntBASIC1.22□□□□□ -2.21
HLA-DMAP28067 AC063944.3-201ENST00000609969 533 ntBASIC1.22□□□□□ -2.21
HLA-DMAP28067 AC009161.2-201ENST00000624626 138 ntBASIC1.22□□□□□ -2.21
HLA-DMAP28067 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.21□□□□□ -2.22
HLA-DMAP28067 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
HLA-DMAP28067 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.21□□□□□ -2.22
HLA-DMAP28067 SNORD114-1-201ENST00000362705 72 ntBASIC1.21□□□□□ -2.22
HLA-DMAP28067 SNORD32B-201ENST00000364460 84 ntBASIC1.21□□□□□ -2.22
HLA-DMAP28067 RNU6-903P-201ENST00000391270 109 ntBASIC1.21□□□□□ -2.22
HLA-DMAP28067 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.21□□□□□ -2.22
HLA-DMAP28067 RN7SKP142-201ENST00000411236 328 ntBASIC1.21□□□□□ -2.22
HLA-DMAP28067 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.21□□□□□ -2.22
HLA-DMAP28067 AL354695.1-201ENST00000427935 228 ntBASIC1.21□□□□□ -2.22
HLA-DMAP28067 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.21□□□□□ -2.22
HLA-DMAP28067 AC007677.1-201ENST00000445757 515 ntBASIC1.21□□□□□ -2.22
HLA-DMAP28067 HMGN2P18-201ENST00000450680 270 ntBASIC1.21□□□□□ -2.22
HLA-DMAP28067 AC013470.1-201ENST00000453438 462 ntBASIC1.21□□□□□ -2.22
HLA-DMAP28067 BET1P1-201ENST00000482276 359 ntBASIC1.21□□□□□ -2.22
HLA-DMAP28067 AC145146.1-201ENST00000496370 254 ntBASIC1.21□□□□□ -2.22
HLA-DMAP28067 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.21□□□□□ -2.22
HLA-DMAP28067 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.21□□□□□ -2.22
HLA-DMAP28067 RN7SKP219-201ENST00000516825 296 ntBASIC1.21□□□□□ -2.22
HLA-DMAP28067 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.21□□□□□ -2.22
HLA-DMAP28067 AP003034.1-201ENST00000534621 422 ntBASIC1.21□□□□□ -2.22
HLA-DMAP28067 AC110760.3-201ENST00000598794 467 ntBASIC1.21□□□□□ -2.22
HLA-DMAP28067 AC018889.1-201ENST00000605372 397 ntBASIC1.21□□□□□ -2.22
HLA-DMAP28067 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.21□□□□□ -2.22
HLA-DMAP28067 AC022418.1-201ENST00000624118 445 ntBASIC1.21□□□□□ -2.22
HLA-DMAP28067 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
HLA-DMAP28067 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.21□□□□□ -2.22
HLA-DMAP28067 RNA5SP493-201ENST00000364115 91 ntBASIC1.2□□□□□ -2.22
HLA-DMAP28067 SNORD32A-201ENST00000364805 84 ntBASIC1.2□□□□□ -2.22
HLA-DMAP28067 MIR517C-201ENST00000385103 95 ntBASIC1.2□□□□□ -2.22
HLA-DMAP28067 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.2□□□□□ -2.22
HLA-DMAP28067 MTCYBP8-201ENST00000422855 651 ntBASIC1.2□□□□□ -2.22
HLA-DMAP28067 AL513185.2-201ENST00000425543 193 ntBASIC1.2□□□□□ -2.22
HLA-DMAP28067 CBX3P6-201ENST00000430257 527 ntBASIC1.2□□□□□ -2.22
HLA-DMAP28067 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.2□□□□□ -2.22
HLA-DMAP28067 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.2□□□□□ -2.22
HLA-DMAP28067 CETN4P-201ENST00000432407 469 ntBASIC1.2□□□□□ -2.22
HLA-DMAP28067 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.2□□□□□ -2.22
HLA-DMAP28067 SNRPGP13-201ENST00000442212 177 ntBASIC1.2□□□□□ -2.22
HLA-DMAP28067 AC079382.1-201ENST00000493346 557 ntBASIC1.2□□□□□ -2.22
HLA-DMAP28067 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.2□□□□□ -2.22
HLA-DMAP28067 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.2□□□□□ -2.22
HLA-DMAP28067 RN7SKP179-201ENST00000516126 217 ntBASIC1.2□□□□□ -2.22
HLA-DMAP28067 SNORA25.15-201ENST00000516487 89 ntBASIC1.2□□□□□ -2.22
HLA-DMAP28067 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.2□□□□□ -2.22
HLA-DMAP28067 AP001893.2-201ENST00000526949 202 ntBASIC1.2□□□□□ -2.22
HLA-DMAP28067 SUB1P2-201ENST00000556401 297 ntBASIC1.2□□□□□ -2.22
HLA-DMAP28067 MTND3P12-201ENST00000559068 328 ntBASIC1.2□□□□□ -2.22
HLA-DMAP28067 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.2□□□□□ -2.22
HLA-DMAP28067 AC068338.1-201ENST00000565567 176 ntBASIC1.2□□□□□ -2.22
HLA-DMAP28067 AC013412.1-201ENST00000610687 192 ntBASIC1.2□□□□□ -2.22
HLA-DMAP28067 AL590240.4-201ENST00000616908 390 ntBASIC1.2□□□□□ -2.22
HLA-DMAP28067 AC022513.1-201ENST00000624512 117 ntBASIC1.2□□□□□ -2.22
HLA-DMAP28067 SNORD98-201ENST00000636377 67 ntBASIC1.2□□□□□ -2.22
HLA-DMAP28067 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.2□□□□□ -2.22
HLA-DMAP28067 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.2□□□□□ -2.22
HLA-DMAP28067 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.2□□□□□ -2.22
HLA-DMAP28067 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.19□□□□□ -2.22
HLA-DMAP28067 MIR340-201ENST00000362125 95 ntBASIC1.19□□□□□ -2.22
HLA-DMAP28067 MIR26B-201ENST00000362251 77 ntBASIC1.19□□□□□ -2.22
HLA-DMAP28067 RNU4-91P-201ENST00000364778 135 ntBASIC1.19□□□□□ -2.22
HLA-DMAP28067 RNA5SP126-201ENST00000365092 109 ntBASIC1.19□□□□□ -2.22
HLA-DMAP28067 RNU6-827P-201ENST00000365553 106 ntBASIC1.19□□□□□ -2.22
HLA-DMAP28067 SNORA36A-201ENST00000384221 132 ntBASIC1.19□□□□□ -2.22
HLA-DMAP28067 SNORA12.2-201ENST00000391040 156 ntBASIC1.19□□□□□ -2.22
HLA-DMAP28067 AL390237.1-201ENST00000404226 1415 ntBASIC1.19□□□□□ -2.22
HLA-DMAP28067 RNU4-46P-201ENST00000410818 138 ntBASIC1.19□□□□□ -2.22
HLA-DMAP28067 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.19□□□□□ -2.22
HLA-DMAP28067 AL117339.3-201ENST00000418733 162 ntBASIC1.19□□□□□ -2.22
HLA-DMAP28067 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC1.19□□□□□ -2.22
HLA-DMAP28067 AL031274.1-201ENST00000450334 232 ntBASIC1.19□□□□□ -2.22
HLA-DMAP28067 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC1.19□□□□□ -2.22
HLA-DMAP28067 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.19□□□□□ -2.22
HLA-DMAP28067 RNU6-430P-201ENST00000517078 107 ntBASIC1.19□□□□□ -2.22
HLA-DMAP28067 AP002963.1-201ENST00000530590 184 ntBASIC1.19□□□□□ -2.22
HLA-DMAP28067 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.19□□□□□ -2.22
HLA-DMAP28067 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.19□□□□□ -2.22
HLA-DMAP28067 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms