Protein–RNA interactions for Protein: P25940

COL5A3, Collagen alpha-3(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3P25940 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.18□□□□□ -2.22
COL5A3P25940 MTCYBP33-201ENST00000575007 1130 ntBASIC1.18□□□□□ -2.22
COL5A3P25940 MIR4782-201ENST00000577987 79 ntBASIC1.18□□□□□ -2.22
COL5A3P25940 MIR4765-201ENST00000585007 77 ntBASIC1.18□□□□□ -2.22
COL5A3P25940 AL391813.1-201ENST00000603098 260 ntBASIC1.18□□□□□ -2.22
COL5A3P25940 AL158032.1-201ENST00000605401 106 ntBASIC1.18□□□□□ -2.22
COL5A3P25940 AC080013.6-201ENST00000606185 215 ntBASIC1.18□□□□□ -2.22
COL5A3P25940 AC103810.9-201ENST00000606688 112 ntBASIC1.18□□□□□ -2.22
COL5A3P25940 DUSP12P1-201ENST00000612874 516 ntBASIC1.18□□□□□ -2.22
COL5A3P25940 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
COL5A3P25940 AC068792.1-201ENST00000621354 417 ntBASIC1.18□□□□□ -2.22
COL5A3P25940 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.18□□□□□ -2.22
COL5A3P25940 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.17□□□□□ -2.22
COL5A3P25940 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.17□□□□□ -2.22
COL5A3P25940 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.17□□□□□ -2.22
COL5A3P25940 RNU4-40P-201ENST00000364351 143 ntBASIC1.17□□□□□ -2.22
COL5A3P25940 Y_RNA.359-201ENST00000365498 102 ntBASIC1.17□□□□□ -2.22
COL5A3P25940 RNU6-259P-201ENST00000383999 107 ntBASIC1.17□□□□□ -2.22
COL5A3P25940 Y_RNA.471-201ENST00000384312 102 ntBASIC1.17□□□□□ -2.22
COL5A3P25940 RNU6-166P-201ENST00000384371 107 ntBASIC1.17□□□□□ -2.22
COL5A3P25940 RNU6-19P-201ENST00000384718 107 ntBASIC1.17□□□□□ -2.22
COL5A3P25940 MTCYBP5-201ENST00000423752 1135 ntBASIC1.17□□□□□ -2.22
COL5A3P25940 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.17□□□□□ -2.22
COL5A3P25940 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.17□□□□□ -2.22
COL5A3P25940 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.17□□□□□ -2.22
COL5A3P25940 AC079781.2-201ENST00000446424 169 ntBASIC1.17□□□□□ -2.22
COL5A3P25940 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.17□□□□□ -2.22
COL5A3P25940 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.17□□□□□ -2.22
COL5A3P25940 AL121769.1-201ENST00000469473 401 ntBASIC1.17□□□□□ -2.22
COL5A3P25940 RPL22P13-201ENST00000493291 347 ntBASIC1.17□□□□□ -2.22
COL5A3P25940 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.17□□□□□ -2.22
COL5A3P25940 AC109927.2-201ENST00000506416 303 ntBASIC1.17□□□□□ -2.22
COL5A3P25940 RBBP4P6-201ENST00000508098 202 ntBASIC1.17□□□□□ -2.22
COL5A3P25940 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.17□□□□□ -2.22
COL5A3P25940 AF213884.2-201ENST00000510417 903 ntBASIC1.17□□□□□ -2.22
COL5A3P25940 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
COL5A3P25940 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.17□□□□□ -2.22
COL5A3P25940 AC009902.1-201ENST00000519351 183 ntBASIC1.17□□□□□ -2.22
COL5A3P25940 DEFB108E-201ENST00000524692 240 ntBASIC1.17□□□□□ -2.22
COL5A3P25940 MIR4529-201ENST00000578110 78 ntBASIC1.17□□□□□ -2.22
COL5A3P25940 AC091805.2-201ENST00000603848 235 ntBASIC1.17□□□□□ -2.22
COL5A3P25940 AC025449.1-201ENST00000603896 529 ntBASIC1.17□□□□□ -2.22
COL5A3P25940 AL161798.1-201ENST00000604630 131 ntBASIC1.17□□□□□ -2.22
COL5A3P25940 AL139286.2-201ENST00000606838 396 ntBASIC1.17□□□□□ -2.22
COL5A3P25940 AL158209.2-201ENST00000619266 216 ntBASIC1.17□□□□□ -2.22
COL5A3P25940 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
COL5A3P25940 RNU6-1287P-201ENST00000362914 107 ntBASIC1.16□□□□□ -2.22
COL5A3P25940 RNU6-898P-201ENST00000365627 104 ntBASIC1.16□□□□□ -2.22
COL5A3P25940 RNU6-1083P-201ENST00000384022 107 ntBASIC1.16□□□□□ -2.22
COL5A3P25940 Y_RNA.517-201ENST00000384551 106 ntBASIC1.16□□□□□ -2.22
COL5A3P25940 RNU6-1060P-201ENST00000384664 107 ntBASIC1.16□□□□□ -2.22
COL5A3P25940 MIR676-201ENST00000390702 67 ntBASIC1.16□□□□□ -2.22
COL5A3P25940 RNU1-78P-201ENST00000391248 165 ntBASIC1.16□□□□□ -2.22
COL5A3P25940 RNU6-1025P-201ENST00000410629 104 ntBASIC1.16□□□□□ -2.22
COL5A3P25940 C1DP2-201ENST00000418167 426 ntBASIC1.16□□□□□ -2.22
COL5A3P25940 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.16□□□□□ -2.22
COL5A3P25940 AC004941.2-201ENST00000427009 228 ntBASIC1.16□□□□□ -2.22
COL5A3P25940 RPL30P4-201ENST00000429309 333 ntBASIC1.16□□□□□ -2.22
COL5A3P25940 AC004383.1-201ENST00000438135 289 ntBASIC1.16□□□□□ -2.22
COL5A3P25940 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.16□□□□□ -2.22
COL5A3P25940 MTND1P29-201ENST00000448112 647 ntBASIC1.16□□□□□ -2.22
COL5A3P25940 FABP5P15-201ENST00000453566 214 ntBASIC1.16□□□□□ -2.22
COL5A3P25940 RNU7-182P-201ENST00000459009 62 ntBASIC1.16□□□□□ -2.22
COL5A3P25940 AC055731.1-201ENST00000474387 401 ntBASIC1.16□□□□□ -2.22
COL5A3P25940 RPL36AP48-201ENST00000485521 314 ntBASIC1.16□□□□□ -2.22
COL5A3P25940 AC079382.1-201ENST00000493346 557 ntBASIC1.16□□□□□ -2.22
COL5A3P25940 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
COL5A3P25940 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.16□□□□□ -2.22
COL5A3P25940 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
COL5A3P25940 RN7SKP298-201ENST00000515950 94 ntBASIC1.16□□□□□ -2.22
COL5A3P25940 RNU6-314P-201ENST00000516574 104 ntBASIC1.16□□□□□ -2.22
COL5A3P25940 RNU5B-3P-201ENST00000516601 115 ntBASIC1.16□□□□□ -2.22
COL5A3P25940 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.16□□□□□ -2.22
COL5A3P25940 AC245505.1-201ENST00000556398 224 ntBASIC1.16□□□□□ -2.22
COL5A3P25940 LINC00933-203ENST00000559812 219 ntBASIC1.16□□□□□ -2.22
COL5A3P25940 AC012213.3-201ENST00000577199 777 ntBASIC1.16□□□□□ -2.22
COL5A3P25940 MIR5692A1-201ENST00000580523 69 ntBASIC1.16□□□□□ -2.22
COL5A3P25940 RSL24D1P11-201ENST00000591045 491 ntBASIC1.16□□□□□ -2.22
COL5A3P25940 DEFB131E-202ENST00000602581 683 ntBASIC1.16□□□□□ -2.22
COL5A3P25940 AC007363.1-201ENST00000604736 620 ntBASIC1.16□□□□□ -2.22
COL5A3P25940 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.16□□□□□ -2.22
COL5A3P25940 AC099842.1-201ENST00000619919 596 ntBASIC1.16□□□□□ -2.22
COL5A3P25940 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.16□□□□□ -2.22
COL5A3P25940 MIR6863-201ENST00000636112 90 ntBASIC1.16□□□□□ -2.22
COL5A3P25940 MTND5P17-201ENST00000418405 1603 ntBASIC1.16□□□□□ -2.22
COL5A3P25940 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
COL5A3P25940 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
COL5A3P25940 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.15□□□□□ -2.22
COL5A3P25940 Y_RNA.41-201ENST00000362646 102 ntBASIC1.15□□□□□ -2.22
COL5A3P25940 RNU6-74P-201ENST00000384235 107 ntBASIC1.15□□□□□ -2.22
COL5A3P25940 AC068050.1-201ENST00000394891 380 ntBASIC1.15□□□□□ -2.22
COL5A3P25940 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.15□□□□□ -2.22
COL5A3P25940 AC016907.1-201ENST00000419483 435 ntBASIC1.15□□□□□ -2.22
COL5A3P25940 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.15□□□□□ -2.22
COL5A3P25940 SKA2P1-201ENST00000425592 390 ntBASIC1.15□□□□□ -2.22
COL5A3P25940 AL627311.1-201ENST00000431514 115 ntBASIC1.15□□□□□ -2.22
COL5A3P25940 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.15□□□□□ -2.22
COL5A3P25940 AC002486.1-201ENST00000435098 391 ntBASIC1.15□□□□□ -2.22
COL5A3P25940 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.15□□□□□ -2.22
COL5A3P25940 AC107032.1-201ENST00000485945 480 ntBASIC1.15□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms