Protein–RNA interactions for Protein: P16403

HIST1H1C, Histone H1.2, humanhuman

Known RBP Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1CP16403 ZNF321P-202ENST00000550843 495 ntBASIC0.8□□□□□ -2.28
HIST1H1CP16403 AC021231.3-201ENST00000558497 370 ntBASIC0.8□□□□□ -2.28
HIST1H1CP16403 MIR4709-201ENST00000577272 72 ntBASIC0.8□□□□□ -2.28
HIST1H1CP16403 MIR4661-201ENST00000582720 75 ntBASIC0.8□□□□□ -2.28
HIST1H1CP16403 AC008752.3-201ENST00000588113 712 ntBASIC0.8□□□□□ -2.28
HIST1H1CP16403 AC069431.2-201ENST00000604149 1099 ntBASIC0.8□□□□□ -2.28
HIST1H1CP16403 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
HIST1H1CP16403 AC091895.1-201ENST00000624494 256 ntBASIC0.8□□□□□ -2.28
HIST1H1CP16403 MTND4P14-201ENST00000435799 1354 ntBASIC0.8□□□□□ -2.28
HIST1H1CP16403 Y_RNA.97-201ENST00000363094 102 ntBASIC0.79□□□□□ -2.28
HIST1H1CP16403 RNU6-1141P-201ENST00000364520 107 ntBASIC0.79□□□□□ -2.28
HIST1H1CP16403 RNU6-1187P-201ENST00000364771 110 ntBASIC0.79□□□□□ -2.28
HIST1H1CP16403 Y_RNA.302-201ENST00000364997 102 ntBASIC0.79□□□□□ -2.28
HIST1H1CP16403 RNU6-43P-201ENST00000384302 107 ntBASIC0.79□□□□□ -2.28
HIST1H1CP16403 RNU6-293P-201ENST00000411259 106 ntBASIC0.79□□□□□ -2.28
HIST1H1CP16403 AC010975.2-201ENST00000427781 588 ntBASIC0.79□□□□□ -2.28
HIST1H1CP16403 AC007395.1-201ENST00000451333 677 ntBASIC0.79□□□□□ -2.28
HIST1H1CP16403 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.79□□□□□ -2.28
HIST1H1CP16403 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.79□□□□□ -2.28
HIST1H1CP16403 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.79□□□□□ -2.28
HIST1H1CP16403 AC010531.2-201ENST00000465012 153 ntBASIC0.79□□□□□ -2.28
HIST1H1CP16403 RNU6-377P-201ENST00000515965 102 ntBASIC0.79□□□□□ -2.28
HIST1H1CP16403 SCARNA16.2-201ENST00000516520 172 ntBASIC0.79□□□□□ -2.28
HIST1H1CP16403 SNORA31.16-201ENST00000516773 139 ntBASIC0.79□□□□□ -2.28
HIST1H1CP16403 MTND4LP18-201ENST00000526864 291 ntBASIC0.79□□□□□ -2.28
HIST1H1CP16403 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC0.79□□□□□ -2.28
HIST1H1CP16403 ZNF519P3-201ENST00000557158 1032 ntBASIC0.79□□□□□ -2.28
HIST1H1CP16403 MIR3923-201ENST00000579521 83 ntBASIC0.79□□□□□ -2.28
HIST1H1CP16403 AP001004.1-201ENST00000582468 324 ntBASIC0.79□□□□□ -2.28
HIST1H1CP16403 AC008521.1-201ENST00000587471 187 ntBASIC0.79□□□□□ -2.28
HIST1H1CP16403 U3.9-201ENST00000363823 204 ntBASIC0.78□□□□□ -2.28
HIST1H1CP16403 RNU6-931P-201ENST00000363850 107 ntBASIC0.78□□□□□ -2.28
HIST1H1CP16403 AL356776.1-201ENST00000406574 447 ntBASIC0.78□□□□□ -2.28
HIST1H1CP16403 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC0.78□□□□□ -2.28
HIST1H1CP16403 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC0.78□□□□□ -2.28
HIST1H1CP16403 Z82205.1-201ENST00000428456 297 ntBASIC0.78□□□□□ -2.28
HIST1H1CP16403 CALM2P2-201ENST00000428512 440 ntBASIC0.78□□□□□ -2.28
HIST1H1CP16403 AC000111.3-201ENST00000433478 193 ntBASIC0.78□□□□□ -2.28
HIST1H1CP16403 RPL37P21-201ENST00000435890 276 ntBASIC0.78□□□□□ -2.28
HIST1H1CP16403 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.78□□□□□ -2.28
HIST1H1CP16403 AC016925.1-201ENST00000458303 298 ntBASIC0.78□□□□□ -2.28
HIST1H1CP16403 RPL39P28-201ENST00000465655 155 ntBASIC0.78□□□□□ -2.28
HIST1H1CP16403 AL163540.1-201ENST00000485382 386 ntBASIC0.78□□□□□ -2.28
HIST1H1CP16403 ARL2BPP4-201ENST00000506854 471 ntBASIC0.78□□□□□ -2.28
HIST1H1CP16403 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.78□□□□□ -2.28
HIST1H1CP16403 CBX3P8-201ENST00000532412 525 ntBASIC0.78□□□□□ -2.28
HIST1H1CP16403 AC104984.5-201ENST00000586878 94 ntBASIC0.78□□□□□ -2.28
HIST1H1CP16403 AC073539.2-201ENST00000597113 165 ntBASIC0.78□□□□□ -2.28
HIST1H1CP16403 Z69720.2-201ENST00000624755 279 ntBASIC0.78□□□□□ -2.28
HIST1H1CP16403 AC004808.1-201ENST00000627671 721 ntBASIC0.78□□□□□ -2.28
HIST1H1CP16403 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.78□□□□□ -2.28
HIST1H1CP16403 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.77□□□□□ -2.29
HIST1H1CP16403 MIR532-201ENST00000385025 91 ntBASIC0.77□□□□□ -2.29
HIST1H1CP16403 FGF7P8-201ENST00000402994 292 ntBASIC0.77□□□□□ -2.29
HIST1H1CP16403 POLR2J4-204ENST00000418424 324 ntBASIC0.77□□□□□ -2.29
HIST1H1CP16403 MTCO2P21-201ENST00000419780 677 ntBASIC0.77□□□□□ -2.29
HIST1H1CP16403 RPS24P1-201ENST00000438550 371 ntBASIC0.77□□□□□ -2.29
HIST1H1CP16403 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.77□□□□□ -2.29
HIST1H1CP16403 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.77□□□□□ -2.29
HIST1H1CP16403 RNU7-34P-201ENST00000459394 64 ntBASIC0.77□□□□□ -2.29
HIST1H1CP16403 AL163973.1-201ENST00000484753 577 ntBASIC0.77□□□□□ -2.29
HIST1H1CP16403 AC112204.1-201ENST00000502591 103 ntBASIC0.77□□□□□ -2.29
HIST1H1CP16403 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.77□□□□□ -2.29
HIST1H1CP16403 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.77□□□□□ -2.29
HIST1H1CP16403 ACA64.5-201ENST00000516207 127 ntBASIC0.77□□□□□ -2.29
HIST1H1CP16403 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.77□□□□□ -2.29
HIST1H1CP16403 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.77□□□□□ -2.29
HIST1H1CP16403 AL020996.3-201ENST00000606617 222 ntBASIC0.77□□□□□ -2.29
HIST1H1CP16403 AL359740.1-201ENST00000624340 592 ntBASIC0.77□□□□□ -2.29
HIST1H1CP16403 AC019226.2-201ENST00000625973 424 ntBASIC0.77□□□□□ -2.29
HIST1H1CP16403 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.77□□□□□ -2.29
HIST1H1CP16403 Y_RNA.132-201ENST00000363421 102 ntBASIC0.76□□□□□ -2.29
HIST1H1CP16403 SNORD114-2-201ENST00000363953 78 ntBASIC0.76□□□□□ -2.29
HIST1H1CP16403 SNORA4.2-201ENST00000365313 147 ntBASIC0.76□□□□□ -2.29
HIST1H1CP16403 RNU6-877P-201ENST00000383868 107 ntBASIC0.76□□□□□ -2.29
HIST1H1CP16403 RNU6-692P-201ENST00000384496 107 ntBASIC0.76□□□□□ -2.29
HIST1H1CP16403 RNU6-636P-201ENST00000384598 107 ntBASIC0.76□□□□□ -2.29
HIST1H1CP16403 SNORA40.4-201ENST00000390971 128 ntBASIC0.76□□□□□ -2.29
HIST1H1CP16403 SNORD115.1-201ENST00000391109 76 ntBASIC0.76□□□□□ -2.29
HIST1H1CP16403 RNU2-3P-201ENST00000410144 191 ntBASIC0.76□□□□□ -2.29
HIST1H1CP16403 RNA5SP201-201ENST00000410316 124 ntBASIC0.76□□□□□ -2.29
HIST1H1CP16403 HIGD1AP15-201ENST00000416198 280 ntBASIC0.76□□□□□ -2.29
HIST1H1CP16403 RPS27AP14-201ENST00000422868 454 ntBASIC0.76□□□□□ -2.29
HIST1H1CP16403 AC007283.2-201ENST00000424739 197 ntBASIC0.76□□□□□ -2.29
HIST1H1CP16403 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.76□□□□□ -2.29
HIST1H1CP16403 MTND1P20-201ENST00000430341 950 ntBASIC0.76□□□□□ -2.29
HIST1H1CP16403 USP9YP14-201ENST00000430663 563 ntBASIC0.76□□□□□ -2.29
HIST1H1CP16403 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.76□□□□□ -2.29
HIST1H1CP16403 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.76□□□□□ -2.29
HIST1H1CP16403 USP9YP25-201ENST00000457708 443 ntBASIC0.76□□□□□ -2.29
HIST1H1CP16403 AC010587.1-201ENST00000505809 469 ntBASIC0.76□□□□□ -2.29
HIST1H1CP16403 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
HIST1H1CP16403 SNORA70.22-201ENST00000517160 124 ntBASIC0.76□□□□□ -2.29
HIST1H1CP16403 HSPE1P4-201ENST00000550617 308 ntBASIC0.76□□□□□ -2.29
HIST1H1CP16403 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.76□□□□□ -2.29
HIST1H1CP16403 AL442163.3-201ENST00000554110 156 ntBASIC0.76□□□□□ -2.29
HIST1H1CP16403 AC008088.1-201ENST00000580993 280 ntBASIC0.76□□□□□ -2.29
HIST1H1CP16403 AC098848.2-201ENST00000588023 330 ntBASIC0.76□□□□□ -2.29
HIST1H1CP16403 FAM71BP1-201ENST00000604431 523 ntBASIC0.76□□□□□ -2.29
HIST1H1CP16403 AC008147.4-201ENST00000617570 1204 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms