Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 RNU6-1061P-201ENST00000516530 99 ntBASIC3.96□□□□□ -1.78
NID1P14543 IFITM8P-201ENST00000522529 394 ntBASIC3.96□□□□□ -1.78
NID1P14543 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.96□□□□□ -1.78
NID1P14543 TRAV8-5-201ENST00000537369 341 ntBASIC3.96□□□□□ -1.78
NID1P14543 AC027176.1-201ENST00000560204 514 ntBASIC3.96□□□□□ -1.78
NID1P14543 AC106785.1-201ENST00000565935 262 ntBASIC3.96□□□□□ -1.78
NID1P14543 MIR3923-201ENST00000579521 83 ntBASIC3.96□□□□□ -1.78
NID1P14543 AC120024.3-201ENST00000603167 156 ntBASIC3.96□□□□□ -1.78
NID1P14543 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.96□□□□□ -1.78
NID1P14543 AC140479.6-201ENST00000633535 357 ntBASIC3.96□□□□□ -1.78
NID1P14543 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.96□□□□□ -1.78
NID1P14543 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NID1P14543 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
NID1P14543 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
NID1P14543 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.96□□□□□ -1.78
NID1P14543 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
NID1P14543 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
NID1P14543 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
NID1P14543 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
NID1P14543 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NID1P14543 Y_RNA.35-201ENST00000362601 101 ntBASIC3.95□□□□□ -1.78
NID1P14543 CBX3P9-201ENST00000402326 552 ntBASIC3.95□□□□□ -1.78
NID1P14543 AL512604.1-201ENST00000404812 257 ntBASIC3.95□□□□□ -1.78
NID1P14543 RN7SKP284-201ENST00000411002 343 ntBASIC3.95□□□□□ -1.78
NID1P14543 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC3.95□□□□□ -1.78
NID1P14543 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.95□□□□□ -1.78
NID1P14543 AL356535.1-201ENST00000440335 398 ntBASIC3.95□□□□□ -1.78
NID1P14543 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.95□□□□□ -1.78
NID1P14543 RN7SL98P-201ENST00000462271 300 ntBASIC3.95□□□□□ -1.78
NID1P14543 RPS29P24-201ENST00000486345 171 ntBASIC3.95□□□□□ -1.78
NID1P14543 RN7SL810P-201ENST00000493031 276 ntBASIC3.95□□□□□ -1.78
NID1P14543 RNU6-344P-201ENST00000516635 111 ntBASIC3.95□□□□□ -1.78
NID1P14543 MIR432-201ENST00000606207 94 ntBASIC3.95□□□□□ -1.78
NID1P14543 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NID1P14543 AC068205.3-201ENST00000636385 468 ntBASIC3.95□□□□□ -1.78
NID1P14543 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC3.95□□□□□ -1.78
NID1P14543 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.95□□□□□ -1.78
NID1P14543 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
NID1P14543 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NID1P14543 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NID1P14543 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NID1P14543 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NID1P14543 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.94□□□□□ -1.78
NID1P14543 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
NID1P14543 Y_RNA.280-201ENST00000364765 112 ntBASIC3.94□□□□□ -1.78
NID1P14543 SNORA48.5-201ENST00000391143 135 ntBASIC3.94□□□□□ -1.78
NID1P14543 MIR1179-201ENST00000408703 91 ntBASIC3.94□□□□□ -1.78
NID1P14543 RNU6-383P-201ENST00000410864 94 ntBASIC3.94□□□□□ -1.78
NID1P14543 Y_RNA.630-201ENST00000411370 108 ntBASIC3.94□□□□□ -1.78
NID1P14543 RPS29P17-201ENST00000430795 166 ntBASIC3.94□□□□□ -1.78
NID1P14543 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
NID1P14543 RPL23AP52-201ENST00000439311 478 ntBASIC3.94□□□□□ -1.78
NID1P14543 PHBP16-201ENST00000446318 950 ntBASIC3.94□□□□□ -1.78
NID1P14543 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.94□□□□□ -1.78
NID1P14543 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.94□□□□□ -1.78
NID1P14543 AC091167.1-201ENST00000492017 396 ntBASIC3.94□□□□□ -1.78
NID1P14543 AIG1P1-201ENST00000503376 148 ntBASIC3.94□□□□□ -1.78
NID1P14543 AL592156.1-201ENST00000508758 304 ntBASIC3.94□□□□□ -1.78
NID1P14543 SNORA70.12-201ENST00000516084 153 ntBASIC3.94□□□□□ -1.78
NID1P14543 RNU6-537P-201ENST00000517277 103 ntBASIC3.94□□□□□ -1.78
NID1P14543 CYCSP29-201ENST00000533731 318 ntBASIC3.94□□□□□ -1.78
NID1P14543 AC069240.1-201ENST00000548774 375 ntBASIC3.94□□□□□ -1.78
NID1P14543 MIR378D2-201ENST00000580636 98 ntBASIC3.94□□□□□ -1.78
NID1P14543 MIR3138-201ENST00000585238 82 ntBASIC3.94□□□□□ -1.78
NID1P14543 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.94□□□□□ -1.78
NID1P14543 AL031274.2-201ENST00000599419 203 ntBASIC3.94□□□□□ -1.78
NID1P14543 AC114781.5-201ENST00000615297 108 ntBASIC3.94□□□□□ -1.78
NID1P14543 SNX18P1Y-201ENST00000616231 511 ntBASIC3.94□□□□□ -1.78
NID1P14543 snoZ196.1-201ENST00000625269 89 ntBASIC3.94□□□□□ -1.78
NID1P14543 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NID1P14543 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NID1P14543 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.94□□□□□ -1.78
NID1P14543 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.94□□□□□ -1.78
NID1P14543 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
NID1P14543 AC011266.1-201ENST00000624119 3569 ntBASIC3.93□□□□□ -1.78
NID1P14543 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NID1P14543 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.93□□□□□ -1.78
NID1P14543 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
NID1P14543 SNORD45.3-201ENST00000363836 72 ntBASIC3.93□□□□□ -1.78
NID1P14543 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
NID1P14543 MIR493-201ENST00000385254 89 ntBASIC3.93□□□□□ -1.78
NID1P14543 PPIAP31-201ENST00000405422 495 ntBASIC3.93□□□□□ -1.78
NID1P14543 RNY4P30-201ENST00000410216 95 ntBASIC3.93□□□□□ -1.78
NID1P14543 Y_RNA.622-201ENST00000411091 108 ntBASIC3.93□□□□□ -1.78
NID1P14543 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.93□□□□□ -1.78
NID1P14543 HSPE1P21-201ENST00000438283 308 ntBASIC3.93□□□□□ -1.78
NID1P14543 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.93□□□□□ -1.78
NID1P14543 AL031737.1-201ENST00000450125 223 ntBASIC3.93□□□□□ -1.78
NID1P14543 NDUFS5P3-201ENST00000450668 321 ntBASIC3.93□□□□□ -1.78
NID1P14543 SNORA84-201ENST00000459229 133 ntBASIC3.93□□□□□ -1.78
NID1P14543 RN7SL691P-201ENST00000494487 301 ntBASIC3.93□□□□□ -1.78
NID1P14543 RPS27AP10-201ENST00000496103 208 ntBASIC3.93□□□□□ -1.78
NID1P14543 PARP4P3-201ENST00000510265 317 ntBASIC3.93□□□□□ -1.78
NID1P14543 RNU1-117P-201ENST00000517041 158 ntBASIC3.93□□□□□ -1.78
NID1P14543 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.93□□□□□ -1.78
NID1P14543 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.93□□□□□ -1.78
NID1P14543 AC025281.1-201ENST00000567026 265 ntBASIC3.93□□□□□ -1.78
NID1P14543 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.93□□□□□ -1.78
NID1P14543 AC025754.2-201ENST00000606491 432 ntBASIC3.93□□□□□ -1.78
NID1P14543 AL121890.5-201ENST00000620848 304 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms