Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 MIR5692A1-201ENST00000580523 69 ntBASIC-0.94□□□□□ -2.56
VCANP13611 AC006441.5-201ENST00000612680 209 ntBASIC-0.94□□□□□ -2.56
VCANP13611 RNU6-1141P-201ENST00000364520 107 ntBASIC-0.94□□□□□ -2.56
VCANP13611 SNX2P2-201ENST00000424553 323 ntBASIC-0.94□□□□□ -2.56
VCANP13611 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC-0.94□□□□□ -2.56
VCANP13611 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC-0.94□□□□□ -2.56
VCANP13611 AC022868.1-201ENST00000517767 391 ntBASIC-0.94□□□□□ -2.56
VCANP13611 MIR3664-201ENST00000579074 99 ntBASIC-0.94□□□□□ -2.56
VCANP13611 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.95□□□□□ -2.56
VCANP13611 RNU6-296P-201ENST00000384608 107 ntBASIC-0.95□□□□□ -2.56
VCANP13611 MIR561-201ENST00000385216 97 ntBASIC-0.95□□□□□ -2.56
VCANP13611 RNU11-3P-201ENST00000391111 133 ntBASIC-0.95□□□□□ -2.56
VCANP13611 AL161935.2-201ENST00000414627 60 ntBASIC-0.95□□□□□ -2.56
VCANP13611 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC-0.95□□□□□ -2.56
VCANP13611 CALM2P2-201ENST00000428512 440 ntBASIC-0.95□□□□□ -2.56
VCANP13611 RNU7-90P-201ENST00000459216 62 ntBASIC-0.95□□□□□ -2.56
VCANP13611 HMGN1P13-201ENST00000505795 138 ntBASIC-0.95□□□□□ -2.56
VCANP13611 MIR3167-201ENST00000579623 85 ntBASIC-0.95□□□□□ -2.56
VCANP13611 AF038458.1-201ENST00000588406 262 ntBASIC-0.95□□□□□ -2.56
VCANP13611 RNU6-1067P-201ENST00000384752 107 ntBASIC-0.95□□□□□ -2.56
VCANP13611 UBE2V1P8-201ENST00000437166 265 ntBASIC-0.95□□□□□ -2.56
VCANP13611 AC140658.3-201ENST00000567603 271 ntBASIC-0.95□□□□□ -2.56
VCANP13611 SNORD115-42-201ENST00000364273 82 ntBASIC-0.96□□□□□ -2.56
VCANP13611 Y_RNA.255-201ENST00000364581 97 ntBASIC-0.96□□□□□ -2.56
VCANP13611 RNU6-925P-201ENST00000384629 104 ntBASIC-0.96□□□□□ -2.56
VCANP13611 Y_RNA.582-201ENST00000391023 95 ntBASIC-0.96□□□□□ -2.56
VCANP13611 DEFB130D-201ENST00000426866 237 ntBASIC-0.96□□□□□ -2.56
VCANP13611 AC002429.1-201ENST00000437672 148 ntBASIC-0.96□□□□□ -2.56
VCANP13611 ZNF736P1Y-201ENST00000440402 1276 ntBASIC-0.96□□□□□ -2.56
VCANP13611 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC-0.96□□□□□ -2.56
VCANP13611 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.96□□□□□ -2.56
VCANP13611 AP000403.1-201ENST00000603349 851 ntBASIC-0.96□□□□□ -2.56
VCANP13611 AL138963.2-201ENST00000605137 226 ntBASIC-0.96□□□□□ -2.56
VCANP13611 Y_RNA.653-201ENST00000459091 95 ntBASIC-0.96□□□□□ -2.56
VCANP13611 RN7SKP34-201ENST00000516142 244 ntBASIC-0.96□□□□□ -2.56
VCANP13611 AC091057.3-201ENST00000602684 733 ntBASIC-0.96□□□□□ -2.56
VCANP13611 RNU1-39P-201ENST00000383897 165 ntBASIC-0.96□□□□□ -2.56
VCANP13611 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC-0.96□□□□□ -2.56
VCANP13611 RNA5SP100-201ENST00000410903 110 ntBASIC-0.96□□□□□ -2.56
VCANP13611 RNA5SP59-201ENST00000410922 110 ntBASIC-0.96□□□□□ -2.56
VCANP13611 5S_rRNA.3-201ENST00000517021 110 ntBASIC-0.96□□□□□ -2.56
VCANP13611 5S_rRNA.19-201ENST00000612131 110 ntBASIC-0.96□□□□□ -2.56
VCANP13611 5S_rRNA.18-201ENST00000621941 110 ntBASIC-0.96□□□□□ -2.56
VCANP13611 MIR1298-201ENST00000408783 112 ntBASIC-0.97□□□□□ -2.56
VCANP13611 RNU2-59P-201ENST00000410482 191 ntBASIC-0.97□□□□□ -2.56
VCANP13611 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC-0.97□□□□□ -2.56
VCANP13611 ELOCP24-201ENST00000456370 334 ntBASIC-0.97□□□□□ -2.56
VCANP13611 RPL30P15-201ENST00000457129 321 ntBASIC-0.97□□□□□ -2.56
VCANP13611 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC-0.97□□□□□ -2.56
VCANP13611 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC-0.97□□□□□ -2.56
VCANP13611 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC-0.97□□□□□ -2.56
VCANP13611 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC-0.97□□□□□ -2.56
VCANP13611 AC048334.1-201ENST00000477975 159 ntBASIC-0.97□□□□□ -2.56
VCANP13611 RNU6-165P-201ENST00000517170 99 ntBASIC-0.97□□□□□ -2.56
VCANP13611 DUXAP1-201ENST00000556632 463 ntBASIC-0.97□□□□□ -2.56
VCANP13611 AP000942.4-201ENST00000604811 241 ntBASIC-0.97□□□□□ -2.56
VCANP13611 FAS-AS1.2-201ENST00000620386 170 ntBASIC-0.97□□□□□ -2.56
VCANP13611 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC-0.97□□□□□ -2.57
VCANP13611 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.97□□□□□ -2.57
VCANP13611 MTCO2P25-201ENST00000447065 681 ntBASIC-0.97□□□□□ -2.57
VCANP13611 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC-0.97□□□□□ -2.57
VCANP13611 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC-0.97□□□□□ -2.57
VCANP13611 AC026421.1-201ENST00000519101 163 ntBASIC-0.97□□□□□ -2.57
VCANP13611 AC116165.2-201ENST00000616705 206 ntBASIC-0.97□□□□□ -2.57
VCANP13611 LINC02555-201ENST00000563933 1951 ntBASIC-0.98□□□□□ -2.57
VCANP13611 Y_RNA.231-201ENST00000364358 102 ntBASIC-0.98□□□□□ -2.57
VCANP13611 SNORA24.1-201ENST00000384401 135 ntBASIC-0.98□□□□□ -2.57
VCANP13611 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.98□□□□□ -2.57
VCANP13611 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC-0.98□□□□□ -2.57
VCANP13611 SNORD32A-201ENST00000364805 84 ntBASIC-0.98□□□□□ -2.57
VCANP13611 MIR92A2-201ENST00000385299 75 ntBASIC-0.98□□□□□ -2.57
VCANP13611 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC-0.98□□□□□ -2.57
VCANP13611 Y_RNA.430-201ENST00000384081 110 ntBASIC-0.99□□□□□ -2.57
VCANP13611 RNU6-540P-201ENST00000384622 101 ntBASIC-0.99□□□□□ -2.57
VCANP13611 SNORA75.6-201ENST00000391318 127 ntBASIC-0.99□□□□□ -2.57
VCANP13611 RNU4-30P-201ENST00000410245 143 ntBASIC-0.99□□□□□ -2.57
VCANP13611 MTCYBP32-201ENST00000427945 1084 ntBASIC-0.99□□□□□ -2.57
VCANP13611 CECR9-201ENST00000453421 199 ntBASIC-0.99□□□□□ -2.57
VCANP13611 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC-0.99□□□□□ -2.57
VCANP13611 RNU6-1092P-201ENST00000516955 87 ntBASIC-0.99□□□□□ -2.57
VCANP13611 RNU1-117P-201ENST00000517041 158 ntBASIC-0.99□□□□□ -2.57
VCANP13611 SNORD115-3-201ENST00000363100 82 ntBASIC-0.99□□□□□ -2.57
VCANP13611 U6atac.2-201ENST00000408644 118 ntBASIC-0.99□□□□□ -2.57
VCANP13611 UBE2V1P10-201ENST00000414685 269 ntBASIC-0.99□□□□□ -2.57
VCANP13611 AL500527.2-201ENST00000454105 95 ntBASIC-0.99□□□□□ -2.57
VCANP13611 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC-0.99□□□□□ -2.57
VCANP13611 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC-0.99□□□□□ -2.57
VCANP13611 AC138869.1-201ENST00000568623 124 ntBASIC-0.99□□□□□ -2.57
VCANP13611 ROCK1P1-201ENST00000573767 549 ntBASIC-0.99□□□□□ -2.57
VCANP13611 AC063944.3-201ENST00000609969 533 ntBASIC-0.99□□□□□ -2.57
VCANP13611 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.99□□□□□ -2.57
VCANP13611 RAC1P7-201ENST00000445367 377 ntBASIC-0.99□□□□□ -2.57
VCANP13611 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC-0.99□□□□□ -2.57
VCANP13611 SNORD79.1-201ENST00000516069 84 ntBASIC-0.99□□□□□ -2.57
VCANP13611 MIR3609-201ENST00000582661 80 ntBASIC-0.99□□□□□ -2.57
VCANP13611 AC006504.8-201ENST00000621046 635 ntBASIC-0.99□□□□□ -2.57
VCANP13611 Y_RNA.484-201ENST00000384389 103 ntBASIC-1□□□□□ -2.57
VCANP13611 MIR563-201ENST00000385080 79 ntBASIC-1□□□□□ -2.57
VCANP13611 MIR29C-201ENST00000385231 88 ntBASIC-1□□□□□ -2.57
VCANP13611 AL392003.1-201ENST00000434394 243 ntBASIC-1□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms