Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 AC018889.1-201ENST00000605372 397 ntBASIC0.5□□□□□ -2.33
PTPRFP10586 Y_RNA.85-201ENST00000363014 111 ntBASIC0.5□□□□□ -2.33
PTPRFP10586 SNORD116-12-201ENST00000384468 92 ntBASIC0.5□□□□□ -2.33
PTPRFP10586 RNU6-817P-201ENST00000391083 104 ntBASIC0.5□□□□□ -2.33
PTPRFP10586 RPL23AP30-201ENST00000432419 501 ntBASIC0.5□□□□□ -2.33
PTPRFP10586 HSPE1P9-201ENST00000440046 311 ntBASIC0.5□□□□□ -2.33
PTPRFP10586 AC104629.1-201ENST00000494226 508 ntBASIC0.5□□□□□ -2.33
PTPRFP10586 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.5□□□□□ -2.33
PTPRFP10586 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.5□□□□□ -2.33
PTPRFP10586 RNU6-165P-201ENST00000517170 99 ntBASIC0.5□□□□□ -2.33
PTPRFP10586 RNA5SP437-201ENST00000517249 129 ntBASIC0.5□□□□□ -2.33
PTPRFP10586 CENPUP1-201ENST00000526649 1202 ntBASIC0.5□□□□□ -2.33
PTPRFP10586 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.5□□□□□ -2.33
PTPRFP10586 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.5□□□□□ -2.33
PTPRFP10586 AL391001.1-201ENST00000602747 715 ntBASIC0.5□□□□□ -2.33
PTPRFP10586 AC078795.2-201ENST00000602835 1252 ntBASIC0.5□□□□□ -2.33
PTPRFP10586 AC023158.2-201ENST00000614876 543 ntBASIC0.5□□□□□ -2.33
PTPRFP10586 RNU6-1285P-201ENST00000363480 105 ntBASIC0.49□□□□□ -2.33
PTPRFP10586 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.49□□□□□ -2.33
PTPRFP10586 AL133373.1-201ENST00000497098 94 ntBASIC0.49□□□□□ -2.33
PTPRFP10586 AC068587.4-201ENST00000533893 186 ntBASIC0.49□□□□□ -2.33
PTPRFP10586 BNIP3P6-201ENST00000549284 499 ntBASIC0.49□□□□□ -2.33
PTPRFP10586 BNIP3P16-201ENST00000589779 534 ntBASIC0.49□□□□□ -2.33
PTPRFP10586 AC099785.1-201ENST00000605697 437 ntBASIC0.49□□□□□ -2.33
PTPRFP10586 AP002802.2-201ENST00000605877 235 ntBASIC0.49□□□□□ -2.33
PTPRFP10586 RNU6-87P-201ENST00000607561 108 ntBASIC0.49□□□□□ -2.33
PTPRFP10586 FRG1KP-201ENST00000623592 341 ntBASIC0.49□□□□□ -2.33
PTPRFP10586 AC067863.3-201ENST00000624172 122 ntBASIC0.49□□□□□ -2.33
PTPRFP10586 AC092104.1-201ENST00000497346 1441 ntBASIC0.49□□□□□ -2.33
PTPRFP10586 RNU4-56P-201ENST00000364700 142 ntBASIC0.48□□□□□ -2.33
PTPRFP10586 MIR544A-201ENST00000384855 91 ntBASIC0.48□□□□□ -2.33
PTPRFP10586 RNU2-3P-201ENST00000410144 191 ntBASIC0.48□□□□□ -2.33
PTPRFP10586 RN7SKP200-201ENST00000410564 320 ntBASIC0.48□□□□□ -2.33
PTPRFP10586 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.48□□□□□ -2.33
PTPRFP10586 AC006366.1-201ENST00000422002 759 ntBASIC0.48□□□□□ -2.33
PTPRFP10586 MTND4P20-201ENST00000424125 869 ntBASIC0.48□□□□□ -2.33
PTPRFP10586 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.48□□□□□ -2.33
PTPRFP10586 ZNF736P5Y-201ENST00000451173 805 ntBASIC0.48□□□□□ -2.33
PTPRFP10586 OR2AQ1P-201ENST00000451972 200 ntBASIC0.48□□□□□ -2.33
PTPRFP10586 Y_RNA.687-201ENST00000516558 91 ntBASIC0.48□□□□□ -2.33
PTPRFP10586 RNU6-1092P-201ENST00000516955 87 ntBASIC0.48□□□□□ -2.33
PTPRFP10586 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.48□□□□□ -2.33
PTPRFP10586 SUMO2P18-201ENST00000518873 252 ntBASIC0.48□□□□□ -2.33
PTPRFP10586 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.48□□□□□ -2.33
PTPRFP10586 MIR3136-201ENST00000583498 78 ntBASIC0.48□□□□□ -2.33
PTPRFP10586 MIR3976-201ENST00000606807 139 ntBASIC0.48□□□□□ -2.33
PTPRFP10586 AL021879.1-201ENST00000611756 288 ntBASIC0.48□□□□□ -2.33
PTPRFP10586 AC084824.5-201ENST00000612009 413 ntBASIC0.48□□□□□ -2.33
PTPRFP10586 AC091948.2-201ENST00000636510 279 ntBASIC0.48□□□□□ -2.33
PTPRFP10586 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.48□□□□□ -2.33
PTPRFP10586 SNORA4.1-201ENST00000364263 144 ntBASIC0.48□□□□□ -2.33
PTPRFP10586 SNORA63D-201ENST00000364359 132 ntBASIC0.48□□□□□ -2.33
PTPRFP10586 RNU6-142P-201ENST00000384019 107 ntBASIC0.48□□□□□ -2.33
PTPRFP10586 RNU6-910P-201ENST00000390844 107 ntBASIC0.48□□□□□ -2.33
PTPRFP10586 RPS3AP36-201ENST00000398190 775 ntBASIC0.48□□□□□ -2.33
PTPRFP10586 AL356776.1-201ENST00000406574 447 ntBASIC0.48□□□□□ -2.33
PTPRFP10586 USP9YP33-201ENST00000412220 421 ntBASIC0.48□□□□□ -2.33
PTPRFP10586 ELOCP17-201ENST00000414751 326 ntBASIC0.48□□□□□ -2.33
PTPRFP10586 ELOCP9-201ENST00000418624 239 ntBASIC0.48□□□□□ -2.33
PTPRFP10586 AL669831.1-202ENST00000428504 417 ntBASIC0.48□□□□□ -2.33
PTPRFP10586 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC0.48□□□□□ -2.33
PTPRFP10586 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.48□□□□□ -2.33
PTPRFP10586 AC097473.1-201ENST00000508142 408 ntBASIC0.48□□□□□ -2.33
PTPRFP10586 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.48□□□□□ -2.33
PTPRFP10586 Y_RNA.681-201ENST00000516445 113 ntBASIC0.48□□□□□ -2.33
PTPRFP10586 AC036111.3-201ENST00000526389 112 ntBASIC0.48□□□□□ -2.33
PTPRFP10586 AC068790.6-201ENST00000602558 258 ntBASIC0.48□□□□□ -2.33
PTPRFP10586 AC092106.3-201ENST00000611308 722 ntBASIC0.48□□□□□ -2.33
PTPRFP10586 RMST_4.1-201ENST00000616886 107 ntBASIC0.48□□□□□ -2.33
PTPRFP10586 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.48□□□□□ -2.33
PTPRFP10586 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.48□□□□□ -2.33
PTPRFP10586 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.48□□□□□ -2.33
PTPRFP10586 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
PTPRFP10586 RNU6-1245P-201ENST00000411130 106 ntBASIC0.47□□□□□ -2.33
PTPRFP10586 SNX2P2-201ENST00000424553 323 ntBASIC0.47□□□□□ -2.33
PTPRFP10586 MTCO2P1-201ENST00000424648 477 ntBASIC0.47□□□□□ -2.33
PTPRFP10586 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.47□□□□□ -2.33
PTPRFP10586 AP000542.1-201ENST00000448473 371 ntBASIC0.47□□□□□ -2.33
PTPRFP10586 AHI1-208ENST00000488690 712 ntTSL 5 BASIC0.47□□□□□ -2.33
PTPRFP10586 RNU2-10P-201ENST00000516375 211 ntBASIC0.47□□□□□ -2.33
PTPRFP10586 AC010376.1-201ENST00000522101 334 ntBASIC0.47□□□□□ -2.33
PTPRFP10586 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.47□□□□□ -2.33
PTPRFP10586 CYP4A27P-201ENST00000567218 190 ntBASIC0.47□□□□□ -2.33
PTPRFP10586 AC068620.3-201ENST00000602749 560 ntBASIC0.47□□□□□ -2.33
PTPRFP10586 AC245297.2-201ENST00000610119 565 ntBASIC0.47□□□□□ -2.33
PTPRFP10586 AL109933.3-201ENST00000619095 188 ntBASIC0.47□□□□□ -2.33
PTPRFP10586 AC068205.3-201ENST00000636385 468 ntBASIC0.47□□□□□ -2.33
PTPRFP10586 AL159152.1-201ENST00000635019 2587 ntBASIC0.47□□□□□ -2.33
PTPRFP10586 Y_RNA.33-201ENST00000362591 102 ntBASIC0.46□□□□□ -2.34
PTPRFP10586 RNU6-212P-201ENST00000362642 104 ntBASIC0.46□□□□□ -2.34
PTPRFP10586 Y_RNA.472-201ENST00000384322 102 ntBASIC0.46□□□□□ -2.34
PTPRFP10586 RNU6-296P-201ENST00000384608 107 ntBASIC0.46□□□□□ -2.34
PTPRFP10586 VPS26BP1-201ENST00000417155 755 ntBASIC0.46□□□□□ -2.34
PTPRFP10586 AL353777.1-201ENST00000425552 326 ntBASIC0.46□□□□□ -2.34
PTPRFP10586 AL589872.1-201ENST00000426602 288 ntBASIC0.46□□□□□ -2.34
PTPRFP10586 AC013262.1-201ENST00000426710 252 ntBASIC0.46□□□□□ -2.34
PTPRFP10586 AL008629.1-201ENST00000438615 184 ntBASIC0.46□□□□□ -2.34
PTPRFP10586 AL157398.1-201ENST00000452981 186 ntBASIC0.46□□□□□ -2.34
PTPRFP10586 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.46□□□□□ -2.34
PTPRFP10586 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms