Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 AC004584.2-201ENST00000570407 410 ntBASIC3.41□□□□□ -1.86
SNRPA1P09661 MIR5696-201ENST00000578474 85 ntBASIC3.41□□□□□ -1.86
SNRPA1P09661 MIR4435-1-201ENST00000582552 80 ntBASIC3.41□□□□□ -1.86
SNRPA1P09661 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.41□□□□□ -1.86
SNRPA1P09661 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.41□□□□□ -1.86
SNRPA1P09661 AC022336.2-201ENST00000568966 2538 ntBASIC3.4□□□□□ -1.86
SNRPA1P09661 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
SNRPA1P09661 RNU6-227P-201ENST00000362865 103 ntBASIC3.4□□□□□ -1.87
SNRPA1P09661 Y_RNA.123-201ENST00000363338 102 ntBASIC3.4□□□□□ -1.87
SNRPA1P09661 RNU6-527P-201ENST00000363425 104 ntBASIC3.4□□□□□ -1.87
SNRPA1P09661 RNU6-105P-201ENST00000363909 104 ntBASIC3.4□□□□□ -1.87
SNRPA1P09661 Y_RNA.424-201ENST00000384063 103 ntBASIC3.4□□□□□ -1.87
SNRPA1P09661 RNU6-1035P-201ENST00000384477 107 ntBASIC3.4□□□□□ -1.87
SNRPA1P09661 MIR888-201ENST00000401186 77 ntBASIC3.4□□□□□ -1.87
SNRPA1P09661 RPS29P13-201ENST00000402041 169 ntBASIC3.4□□□□□ -1.87
SNRPA1P09661 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
SNRPA1P09661 TRIAP1P1-201ENST00000427062 225 ntBASIC3.4□□□□□ -1.87
SNRPA1P09661 AL590664.1-201ENST00000448065 339 ntBASIC3.4□□□□□ -1.87
SNRPA1P09661 RPL30P14-201ENST00000482744 348 ntBASIC3.4□□□□□ -1.87
SNRPA1P09661 AC006483.1-201ENST00000487308 313 ntBASIC3.4□□□□□ -1.87
SNRPA1P09661 RPS27AP10-201ENST00000496103 208 ntBASIC3.4□□□□□ -1.87
SNRPA1P09661 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.4□□□□□ -1.87
SNRPA1P09661 SNORA9.3-201ENST00000516383 129 ntBASIC3.4□□□□□ -1.87
SNRPA1P09661 RNU6-635P-201ENST00000516651 102 ntBASIC3.4□□□□□ -1.87
SNRPA1P09661 SNORA31.18-201ENST00000517043 134 ntBASIC3.4□□□□□ -1.87
SNRPA1P09661 Y_RNA.721-201ENST00000517207 102 ntBASIC3.4□□□□□ -1.87
SNRPA1P09661 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.4□□□□□ -1.87
SNRPA1P09661 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.4□□□□□ -1.87
SNRPA1P09661 MIR5188-201ENST00000583467 113 ntBASIC3.4□□□□□ -1.87
SNRPA1P09661 AL133393.1-201ENST00000603277 287 ntBASIC3.4□□□□□ -1.87
SNRPA1P09661 AL121655.1-201ENST00000605811 308 ntBASIC3.4□□□□□ -1.87
SNRPA1P09661 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.4□□□□□ -1.87
SNRPA1P09661 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.4□□□□□ -1.87
SNRPA1P09661 AC009318.2-201ENST00000610917 651 ntBASIC3.4□□□□□ -1.87
SNRPA1P09661 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SNRPA1P09661 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SNRPA1P09661 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.39□□□□□ -1.87
SNRPA1P09661 MAPK10-322ENST00000641485 4530 ntBASIC3.39□□□□□ -1.87
SNRPA1P09661 Y_RNA.149-201ENST00000363558 117 ntBASIC3.39□□□□□ -1.87
SNRPA1P09661 RNU6-595P-201ENST00000363944 107 ntBASIC3.39□□□□□ -1.87
SNRPA1P09661 SNORA14A-201ENST00000364773 135 ntBASIC3.39□□□□□ -1.87
SNRPA1P09661 MIR625-201ENST00000385047 85 ntBASIC3.39□□□□□ -1.87
SNRPA1P09661 RNA5SP38-201ENST00000410750 119 ntBASIC3.39□□□□□ -1.87
SNRPA1P09661 AC099548.1-201ENST00000421443 426 ntBASIC3.39□□□□□ -1.87
SNRPA1P09661 AC079354.2-201ENST00000453523 154 ntBASIC3.39□□□□□ -1.87
SNRPA1P09661 RPL23AP49-201ENST00000492925 468 ntBASIC3.39□□□□□ -1.87
SNRPA1P09661 AC010186.2-204ENST00000537668 439 ntBASIC3.39□□□□□ -1.87
SNRPA1P09661 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.39□□□□□ -1.87
SNRPA1P09661 AMZ2P1-203ENST00000565833 850 ntBASIC3.39□□□□□ -1.87
SNRPA1P09661 AC006600.1-201ENST00000572529 153 ntBASIC3.39□□□□□ -1.87
SNRPA1P09661 MIR5701-3-201ENST00000578890 82 ntBASIC3.39□□□□□ -1.87
SNRPA1P09661 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.39□□□□□ -1.87
SNRPA1P09661 MIR3149-201ENST00000584629 83 ntBASIC3.39□□□□□ -1.87
SNRPA1P09661 MIR5701-1-201ENST00000585138 82 ntBASIC3.39□□□□□ -1.87
SNRPA1P09661 AC124312.5-201ENST00000604451 268 ntBASIC3.39□□□□□ -1.87
SNRPA1P09661 MIR5701-2-201ENST00000615634 82 ntBASIC3.39□□□□□ -1.87
SNRPA1P09661 AL138880.2-201ENST00000616214 239 ntBASIC3.39□□□□□ -1.87
SNRPA1P09661 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.39□□□□□ -1.87
SNRPA1P09661 AC138305.3-201ENST00000624988 240 ntBASIC3.39□□□□□ -1.87
SNRPA1P09661 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SNRPA1P09661 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
SNRPA1P09661 RNU6-942P-201ENST00000363002 107 ntBASIC3.38□□□□□ -1.87
SNRPA1P09661 Y_RNA.106-201ENST00000363189 100 ntBASIC3.38□□□□□ -1.87
SNRPA1P09661 RNU6-238P-201ENST00000363313 106 ntBASIC3.38□□□□□ -1.87
SNRPA1P09661 RNU6-505P-201ENST00000384427 107 ntBASIC3.38□□□□□ -1.87
SNRPA1P09661 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SNRPA1P09661 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SNRPA1P09661 AC010655.3-201ENST00000478818 450 ntBASIC3.38□□□□□ -1.87
SNRPA1P09661 RPL22P13-201ENST00000493291 347 ntBASIC3.38□□□□□ -1.87
SNRPA1P09661 RNU7-4P-201ENST00000516961 62 ntBASIC3.38□□□□□ -1.87
SNRPA1P09661 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.38□□□□□ -1.87
SNRPA1P09661 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.38□□□□□ -1.87
SNRPA1P09661 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.38□□□□□ -1.87
SNRPA1P09661 AC010205.1-201ENST00000616668 449 ntBASIC3.38□□□□□ -1.87
SNRPA1P09661 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
SNRPA1P09661 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
SNRPA1P09661 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
SNRPA1P09661 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SNRPA1P09661 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SNRPA1P09661 Y_RNA.176-201ENST00000363815 109 ntBASIC3.37□□□□□ -1.87
SNRPA1P09661 SET-203ENST00000372688 801 ntTSL 2 BASIC3.37□□□□□ -1.87
SNRPA1P09661 RNU6-700P-201ENST00000391043 107 ntBASIC3.37□□□□□ -1.87
SNRPA1P09661 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.37□□□□□ -1.87
SNRPA1P09661 RNA5SP494-201ENST00000410653 129 ntBASIC3.37□□□□□ -1.87
SNRPA1P09661 MTCO3P29-201ENST00000432119 779 ntBASIC3.37□□□□□ -1.87
SNRPA1P09661 RPL26P9-201ENST00000457466 433 ntBASIC3.37□□□□□ -1.87
SNRPA1P09661 MRPS35P2-201ENST00000508242 191 ntBASIC3.37□□□□□ -1.87
SNRPA1P09661 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.37□□□□□ -1.87
SNRPA1P09661 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.37□□□□□ -1.87
SNRPA1P09661 AC091544.4-201ENST00000555268 342 ntBASIC3.37□□□□□ -1.87
SNRPA1P09661 MIR6134-201ENST00000617606 109 ntBASIC3.37□□□□□ -1.87
SNRPA1P09661 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.37□□□□□ -1.87
SNRPA1P09661 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.37□□□□□ -1.87
SNRPA1P09661 AC073308.1-201ENST00000623696 305 ntBASIC3.37□□□□□ -1.87
SNRPA1P09661 AC241585.2-209ENST00000638217 143 ntBASIC3.37□□□□□ -1.87
SNRPA1P09661 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.37□□□□□ -1.87
SNRPA1P09661 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SNRPA1P09661 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
SNRPA1P09661 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
SNRPA1P09661 RNU1-100P-201ENST00000365255 165 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 199.2 ms