Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.32□□□□□ -2.2
ERCC1P07992 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.32□□□□□ -2.2
ERCC1P07992 VN1R80P-201ENST00000597126 338 ntBASIC1.32□□□□□ -2.2
ERCC1P07992 AC012507.3-201ENST00000603556 477 ntBASIC1.32□□□□□ -2.2
ERCC1P07992 PRR13P7-201ENST00000605538 430 ntBASIC1.32□□□□□ -2.2
ERCC1P07992 AC091304.6-201ENST00000619761 202 ntBASIC1.32□□□□□ -2.2
ERCC1P07992 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.32□□□□□ -2.2
ERCC1P07992 AC068205.3-201ENST00000636385 468 ntBASIC1.32□□□□□ -2.2
ERCC1P07992 MTND4P4-201ENST00000439033 1366 ntBASIC1.32□□□□□ -2.2
ERCC1P07992 ZNF209P-201ENST00000593450 2304 ntBASIC1.31□□□□□ -2.2
ERCC1P07992 RNU6-60P-201ENST00000364792 103 ntBASIC1.31□□□□□ -2.2
ERCC1P07992 RNU6-1303P-201ENST00000364841 107 ntBASIC1.31□□□□□ -2.2
ERCC1P07992 MIR1304-201ENST00000408243 91 ntBASIC1.31□□□□□ -2.2
ERCC1P07992 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.31□□□□□ -2.2
ERCC1P07992 GPR143P-201ENST00000434155 205 ntBASIC1.31□□□□□ -2.2
ERCC1P07992 JTBP1-201ENST00000441314 247 ntBASIC1.31□□□□□ -2.2
ERCC1P07992 AL022238.1-201ENST00000442557 355 ntBASIC1.31□□□□□ -2.2
ERCC1P07992 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.31□□□□□ -2.2
ERCC1P07992 AC013470.1-201ENST00000453438 462 ntBASIC1.31□□□□□ -2.2
ERCC1P07992 MTCYBP1-201ENST00000454315 1119 ntBASIC1.31□□□□□ -2.2
ERCC1P07992 AMD1P1-201ENST00000457220 922 ntBASIC1.31□□□□□ -2.2
ERCC1P07992 RPL31P3-201ENST00000458430 332 ntBASIC1.31□□□□□ -2.2
ERCC1P07992 RPL26P26-201ENST00000480251 434 ntBASIC1.31□□□□□ -2.2
ERCC1P07992 AC005178.1-201ENST00000508392 440 ntBASIC1.31□□□□□ -2.2
ERCC1P07992 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.31□□□□□ -2.2
ERCC1P07992 RNU6-902P-201ENST00000517212 91 ntBASIC1.31□□□□□ -2.2
ERCC1P07992 AP005597.4-201ENST00000526762 229 ntBASIC1.31□□□□□ -2.2
ERCC1P07992 AP003072.2-201ENST00000527756 676 ntBASIC1.31□□□□□ -2.2
ERCC1P07992 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.31□□□□□ -2.2
ERCC1P07992 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.31□□□□□ -2.2
ERCC1P07992 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.31□□□□□ -2.2
ERCC1P07992 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.31□□□□□ -2.2
ERCC1P07992 DNAJC19P9-201ENST00000555084 351 ntBASIC1.31□□□□□ -2.2
ERCC1P07992 MIR3923-201ENST00000579521 83 ntBASIC1.31□□□□□ -2.2
ERCC1P07992 AC107304.1-201ENST00000604229 296 ntBASIC1.31□□□□□ -2.2
ERCC1P07992 AL356157.2-201ENST00000605122 111 ntBASIC1.31□□□□□ -2.2
ERCC1P07992 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
ERCC1P07992 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
ERCC1P07992 AC068787.1-201ENST00000623908 691 ntBASIC1.31□□□□□ -2.2
ERCC1P07992 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.31□□□□□ -2.2
ERCC1P07992 MTND5P10-201ENST00000603719 1809 ntBASIC1.31□□□□□ -2.2
ERCC1P07992 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
ERCC1P07992 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.31□□□□□ -2.2
ERCC1P07992 RNU6-428P-201ENST00000362942 107 ntBASIC1.3□□□□□ -2.2
ERCC1P07992 RNY4P34-201ENST00000364779 95 ntBASIC1.3□□□□□ -2.2
ERCC1P07992 SNORA32.2-201ENST00000384049 122 ntBASIC1.3□□□□□ -2.2
ERCC1P07992 MIR454-201ENST00000390180 115 ntBASIC1.3□□□□□ -2.2
ERCC1P07992 RNA5SP201-201ENST00000410316 124 ntBASIC1.3□□□□□ -2.2
ERCC1P07992 RPS3AP3-201ENST00000411933 242 ntBASIC1.3□□□□□ -2.2
ERCC1P07992 RPL30P13-201ENST00000418873 348 ntBASIC1.3□□□□□ -2.2
ERCC1P07992 EBAG9P1-201ENST00000418955 543 ntBASIC1.3□□□□□ -2.2
ERCC1P07992 AC011233.1-201ENST00000422812 283 ntBASIC1.3□□□□□ -2.2
ERCC1P07992 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.3□□□□□ -2.2
ERCC1P07992 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.3□□□□□ -2.2
ERCC1P07992 AL162395.1-201ENST00000457882 422 ntBASIC1.3□□□□□ -2.2
ERCC1P07992 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.3□□□□□ -2.2
ERCC1P07992 RPS26P55-201ENST00000471178 356 ntBASIC1.3□□□□□ -2.2
ERCC1P07992 RPL36AP21-201ENST00000490372 323 ntBASIC1.3□□□□□ -2.2
ERCC1P07992 AC099513.1-201ENST00000490423 301 ntBASIC1.3□□□□□ -2.2
ERCC1P07992 MTCO3P7-201ENST00000510008 774 ntBASIC1.3□□□□□ -2.2
ERCC1P07992 ATP5EP1-201ENST00000510257 156 ntBASIC1.3□□□□□ -2.2
ERCC1P07992 SNORD60.2-201ENST00000516883 86 ntBASIC1.3□□□□□ -2.2
ERCC1P07992 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.3□□□□□ -2.2
ERCC1P07992 HSPE1P4-201ENST00000550617 308 ntBASIC1.3□□□□□ -2.2
ERCC1P07992 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.3□□□□□ -2.2
ERCC1P07992 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.3□□□□□ -2.2
ERCC1P07992 HMGB1P33-201ENST00000563485 527 ntBASIC1.3□□□□□ -2.2
ERCC1P07992 MIR4775-201ENST00000581168 75 ntBASIC1.3□□□□□ -2.2
ERCC1P07992 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.3□□□□□ -2.2
ERCC1P07992 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.3□□□□□ -2.2
ERCC1P07992 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.3□□□□□ -2.2
ERCC1P07992 AC092268.1-201ENST00000342691 405 ntBASIC1.29□□□□□ -2.2
ERCC1P07992 U3.9-201ENST00000363823 204 ntBASIC1.29□□□□□ -2.2
ERCC1P07992 SNORD32A-201ENST00000364805 84 ntBASIC1.29□□□□□ -2.2
ERCC1P07992 SNORD26-201ENST00000384147 75 ntBASIC1.29□□□□□ -2.2
ERCC1P07992 MIR520A-201ENST00000384862 85 ntBASIC1.29□□□□□ -2.2
ERCC1P07992 RNU6-360P-201ENST00000390944 104 ntBASIC1.29□□□□□ -2.2
ERCC1P07992 SNORA26.3-201ENST00000391119 136 ntBASIC1.29□□□□□ -2.2
ERCC1P07992 RPS29P13-201ENST00000402041 169 ntBASIC1.29□□□□□ -2.2
ERCC1P07992 RNU4-46P-201ENST00000410818 138 ntBASIC1.29□□□□□ -2.2
ERCC1P07992 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.29□□□□□ -2.2
ERCC1P07992 BTF3P4-201ENST00000418852 495 ntBASIC1.29□□□□□ -2.2
ERCC1P07992 SDAD1P3-201ENST00000427380 333 ntBASIC1.29□□□□□ -2.2
ERCC1P07992 C8orf59P1-201ENST00000429930 303 ntBASIC1.29□□□□□ -2.2
ERCC1P07992 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.29□□□□□ -2.2
ERCC1P07992 FTH1P12-201ENST00000432137 551 ntBASIC1.29□□□□□ -2.2
ERCC1P07992 AL596276.1-201ENST00000434465 418 ntBASIC1.29□□□□□ -2.2
ERCC1P07992 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.29□□□□□ -2.2
ERCC1P07992 RNU7-182P-201ENST00000459009 62 ntBASIC1.29□□□□□ -2.2
ERCC1P07992 RPL9P9-202ENST00000466501 579 ntBASIC1.29□□□□□ -2.2
ERCC1P07992 SNORD27.1-201ENST00000516319 72 ntBASIC1.29□□□□□ -2.2
ERCC1P07992 AL161670.1-201ENST00000554348 137 ntBASIC1.29□□□□□ -2.2
ERCC1P07992 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.29□□□□□ -2.2
ERCC1P07992 AC015720.1-201ENST00000565251 277 ntBASIC1.29□□□□□ -2.2
ERCC1P07992 AC091805.2-201ENST00000603848 235 ntBASIC1.29□□□□□ -2.2
ERCC1P07992 AC069114.2-201ENST00000604699 304 ntBASIC1.29□□□□□ -2.2
ERCC1P07992 AC092354.1-201ENST00000606057 376 ntBASIC1.29□□□□□ -2.2
ERCC1P07992 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.29□□□□□ -2.2
ERCC1P07992 SEPT14P19-203ENST00000633205 211 ntBASIC1.29□□□□□ -2.2
ERCC1P07992 MTND4P14-201ENST00000435799 1354 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms