Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.4□□□□□ -2.19
CD74P04233 RNU6-266P-201ENST00000364225 107 ntBASIC1.4□□□□□ -2.19
CD74P04233 RNU6-336P-201ENST00000364891 107 ntBASIC1.4□□□□□ -2.19
CD74P04233 RNU6-996P-201ENST00000365438 107 ntBASIC1.4□□□□□ -2.19
CD74P04233 RNU6-692P-201ENST00000384496 107 ntBASIC1.4□□□□□ -2.19
CD74P04233 AC003989.2-201ENST00000440224 169 ntBASIC1.4□□□□□ -2.19
CD74P04233 AC007677.1-201ENST00000445757 515 ntBASIC1.4□□□□□ -2.19
CD74P04233 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.4□□□□□ -2.19
CD74P04233 AC079140.3-201ENST00000511111 550 ntBASIC1.4□□□□□ -2.19
CD74P04233 RNA5SP182-201ENST00000516064 82 ntBASIC1.4□□□□□ -2.19
CD74P04233 RNU6-991P-201ENST00000516168 107 ntBASIC1.4□□□□□ -2.19
CD74P04233 RNU6-548P-201ENST00000517083 115 ntBASIC1.4□□□□□ -2.19
CD74P04233 SNORA25.17-201ENST00000517184 124 ntBASIC1.4□□□□□ -2.19
CD74P04233 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.4□□□□□ -2.19
CD74P04233 AL137161.1-201ENST00000532231 390 ntBASIC1.4□□□□□ -2.19
CD74P04233 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.4□□□□□ -2.19
CD74P04233 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.4□□□□□ -2.19
CD74P04233 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.4□□□□□ -2.19
CD74P04233 AC103996.1-201ENST00000555468 102 ntBASIC1.4□□□□□ -2.19
CD74P04233 MTND1P15-201ENST00000579262 949 ntBASIC1.4□□□□□ -2.19
CD74P04233 MIR3611-201ENST00000584484 83 ntBASIC1.4□□□□□ -2.19
CD74P04233 BNIP3P10-201ENST00000605360 577 ntBASIC1.4□□□□□ -2.19
CD74P04233 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.4□□□□□ -2.19
CD74P04233 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.4□□□□□ -2.19
CD74P04233 AL359314.1-201ENST00000616913 261 ntBASIC1.4□□□□□ -2.19
CD74P04233 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.4□□□□□ -2.19
CD74P04233 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
CD74P04233 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
CD74P04233 Y_RNA.1-201ENST00000352915 104 ntBASIC1.39□□□□□ -2.19
CD74P04233 RNU6-827P-201ENST00000365553 106 ntBASIC1.39□□□□□ -2.19
CD74P04233 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
CD74P04233 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.39□□□□□ -2.19
CD74P04233 RNU5A-6P-201ENST00000384136 116 ntBASIC1.39□□□□□ -2.19
CD74P04233 RNU6-517P-201ENST00000384362 110 ntBASIC1.39□□□□□ -2.19
CD74P04233 Y_RNA.480-201ENST00000384364 102 ntBASIC1.39□□□□□ -2.19
CD74P04233 RNU6-1222P-201ENST00000384615 107 ntBASIC1.39□□□□□ -2.19
CD74P04233 MIR29B2-201ENST00000385055 81 ntBASIC1.39□□□□□ -2.19
CD74P04233 DEFB108C-201ENST00000400154 252 ntBASIC1.39□□□□□ -2.19
CD74P04233 RNU2-48P-201ENST00000410694 191 ntBASIC1.39□□□□□ -2.19
CD74P04233 CDK8P2-201ENST00000415020 547 ntBASIC1.39□□□□□ -2.19
CD74P04233 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.39□□□□□ -2.19
CD74P04233 AL353193.1-201ENST00000421444 268 ntBASIC1.39□□□□□ -2.19
CD74P04233 AL590556.1-201ENST00000423231 483 ntBASIC1.39□□□□□ -2.19
CD74P04233 RPS15AP10-201ENST00000432472 382 ntBASIC1.39□□□□□ -2.19
CD74P04233 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.39□□□□□ -2.19
CD74P04233 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.39□□□□□ -2.19
CD74P04233 AL356010.1-201ENST00000456364 102 ntBASIC1.39□□□□□ -2.19
CD74P04233 HMGN2P23-201ENST00000456759 269 ntBASIC1.39□□□□□ -2.19
CD74P04233 PRELID3BP1-201ENST00000457142 540 ntBASIC1.39□□□□□ -2.19
CD74P04233 TPT1P7-201ENST00000458300 517 ntBASIC1.39□□□□□ -2.19
CD74P04233 RPL31P3-201ENST00000458430 332 ntBASIC1.39□□□□□ -2.19
CD74P04233 Y_RNA.638-201ENST00000459374 113 ntBASIC1.39□□□□□ -2.19
CD74P04233 GMFBP1-201ENST00000467831 427 ntBASIC1.39□□□□□ -2.19
CD74P04233 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.39□□□□□ -2.19
CD74P04233 AK3P2-201ENST00000507976 429 ntBASIC1.39□□□□□ -2.19
CD74P04233 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.39□□□□□ -2.19
CD74P04233 RNU5F-2P-201ENST00000516066 82 ntBASIC1.39□□□□□ -2.19
CD74P04233 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.39□□□□□ -2.19
CD74P04233 MTND2P38-201ENST00000522536 667 ntBASIC1.39□□□□□ -2.19
CD74P04233 AC004223.2-201ENST00000590309 544 ntBASIC1.39□□□□□ -2.19
CD74P04233 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.39□□□□□ -2.19
CD74P04233 RMST_6.1-201ENST00000611980 203 ntBASIC1.39□□□□□ -2.19
CD74P04233 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
CD74P04233 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.39□□□□□ -2.19
CD74P04233 AC233981.2-201ENST00000611524 1614 ntBASIC1.38□□□□□ -2.19
CD74P04233 Y_RNA.409-201ENST00000383990 98 ntBASIC1.38□□□□□ -2.19
CD74P04233 SNORD116-9-201ENST00000384000 95 ntBASIC1.38□□□□□ -2.19
CD74P04233 RNU6-611P-201ENST00000384276 104 ntBASIC1.38□□□□□ -2.19
CD74P04233 SNORD116-3-201ENST00000384287 95 ntBASIC1.38□□□□□ -2.19
CD74P04233 SNORD116-7-201ENST00000384404 95 ntBASIC1.38□□□□□ -2.19
CD74P04233 SNORD116-5-201ENST00000384462 95 ntBASIC1.38□□□□□ -2.19
CD74P04233 MIR583-201ENST00000384846 75 ntBASIC1.38□□□□□ -2.19
CD74P04233 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
CD74P04233 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
CD74P04233 SNORA12-201ENST00000391162 147 ntBASIC1.38□□□□□ -2.19
CD74P04233 RNU6-1158P-201ENST00000391167 107 ntBASIC1.38□□□□□ -2.19
CD74P04233 BTF3L4P2-201ENST00000392798 346 ntBASIC1.38□□□□□ -2.19
CD74P04233 MIR1262-201ENST00000408276 93 ntBASIC1.38□□□□□ -2.19
CD74P04233 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.38□□□□□ -2.19
CD74P04233 AC009310.1-201ENST00000414414 451 ntBASIC1.38□□□□□ -2.19
CD74P04233 MTCO2P19-201ENST00000427513 598 ntBASIC1.38□□□□□ -2.19
CD74P04233 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.38□□□□□ -2.19
CD74P04233 AL606489.2-201ENST00000433886 234 ntBASIC1.38□□□□□ -2.19
CD74P04233 AC021146.2-201ENST00000504736 556 ntBASIC1.38□□□□□ -2.19
CD74P04233 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.38□□□□□ -2.19
CD74P04233 FAM206BP-201ENST00000510179 541 ntBASIC1.38□□□□□ -2.19
CD74P04233 AC009646.1-201ENST00000510455 318 ntBASIC1.38□□□□□ -2.19
CD74P04233 MIR449C-201ENST00000516047 92 ntBASIC1.38□□□□□ -2.19
CD74P04233 RN7SKP256-201ENST00000517201 314 ntBASIC1.38□□□□□ -2.19
CD74P04233 AC022616.8-201ENST00000533569 253 ntBASIC1.38□□□□□ -2.19
CD74P04233 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.38□□□□□ -2.19
CD74P04233 AC012507.3-201ENST00000603556 477 ntBASIC1.38□□□□□ -2.19
CD74P04233 RNU6-85P-201ENST00000605989 107 ntBASIC1.38□□□□□ -2.19
CD74P04233 AC103810.8-201ENST00000607347 118 ntBASIC1.38□□□□□ -2.19
CD74P04233 U2.17-201ENST00000611454 95 ntBASIC1.38□□□□□ -2.19
CD74P04233 uc_338.5-201ENST00000611839 155 ntBASIC1.38□□□□□ -2.19
CD74P04233 MIR6845-201ENST00000613182 61 ntBASIC1.38□□□□□ -2.19
CD74P04233 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CD74P04233 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.38□□□□□ -2.19
CD74P04233 uc_338.34-201ENST00000617467 174 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms