Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.82□□□□□ -2.28
HLA-DRAP01903 SNORD98-201ENST00000636377 67 ntBASIC0.82□□□□□ -2.28
HLA-DRAP01903 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
HLA-DRAP01903 AL159152.1-201ENST00000635019 2587 ntBASIC0.82□□□□□ -2.28
HLA-DRAP01903 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
HLA-DRAP01903 RNU4-92P-201ENST00000363783 136 ntBASIC0.81□□□□□ -2.28
HLA-DRAP01903 SNORA32.2-201ENST00000384049 122 ntBASIC0.81□□□□□ -2.28
HLA-DRAP01903 PIGFP2-201ENST00000421400 651 ntBASIC0.81□□□□□ -2.28
HLA-DRAP01903 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.81□□□□□ -2.28
HLA-DRAP01903 AC004941.2-201ENST00000427009 228 ntBASIC0.81□□□□□ -2.28
HLA-DRAP01903 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC0.81□□□□□ -2.28
HLA-DRAP01903 AC099677.2-201ENST00000436385 175 ntBASIC0.81□□□□□ -2.28
HLA-DRAP01903 ZNF736P1Y-201ENST00000440402 1276 ntBASIC0.81□□□□□ -2.28
HLA-DRAP01903 snoU13.27-201ENST00000459278 104 ntBASIC0.81□□□□□ -2.28
HLA-DRAP01903 AC104982.1-201ENST00000478775 574 ntBASIC0.81□□□□□ -2.28
HLA-DRAP01903 SCARNA16.2-201ENST00000516520 172 ntBASIC0.81□□□□□ -2.28
HLA-DRAP01903 RN7SKP88-201ENST00000516847 250 ntBASIC0.81□□□□□ -2.28
HLA-DRAP01903 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.81□□□□□ -2.28
HLA-DRAP01903 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.81□□□□□ -2.28
HLA-DRAP01903 AP001893.2-201ENST00000526949 202 ntBASIC0.81□□□□□ -2.28
HLA-DRAP01903 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.81□□□□□ -2.28
HLA-DRAP01903 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC0.81□□□□□ -2.28
HLA-DRAP01903 7SK.8-201ENST00000612110 250 ntBASIC0.81□□□□□ -2.28
HLA-DRAP01903 7SK.11-201ENST00000615477 250 ntBASIC0.81□□□□□ -2.28
HLA-DRAP01903 7SK.13-201ENST00000622040 250 ntBASIC0.81□□□□□ -2.28
HLA-DRAP01903 AC027335.2-201ENST00000624030 375 ntBASIC0.81□□□□□ -2.28
HLA-DRAP01903 AL359740.1-201ENST00000624340 592 ntBASIC0.81□□□□□ -2.28
HLA-DRAP01903 MIR6866-201ENST00000638146 69 ntBASIC0.81□□□□□ -2.28
HLA-DRAP01903 MTND4P16-201ENST00000466108 1367 ntBASIC0.81□□□□□ -2.28
HLA-DRAP01903 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.81□□□□□ -2.28
HLA-DRAP01903 HSBP1P2-201ENST00000299671 229 ntBASIC0.8□□□□□ -2.28
HLA-DRAP01903 Y_RNA.191-201ENST00000363972 113 ntBASIC0.8□□□□□ -2.28
HLA-DRAP01903 RNU6-371P-201ENST00000364283 108 ntBASIC0.8□□□□□ -2.28
HLA-DRAP01903 RNU4-68P-201ENST00000364314 141 ntBASIC0.8□□□□□ -2.28
HLA-DRAP01903 SNORA25-201ENST00000384384 134 ntBASIC0.8□□□□□ -2.28
HLA-DRAP01903 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
HLA-DRAP01903 MTCYBP2-201ENST00000407745 171 ntBASIC0.8□□□□□ -2.28
HLA-DRAP01903 RNU2-64P-201ENST00000411315 191 ntBASIC0.8□□□□□ -2.28
HLA-DRAP01903 RNA5SP111-201ENST00000411386 101 ntBASIC0.8□□□□□ -2.28
HLA-DRAP01903 AL031779.1-201ENST00000415663 330 ntBASIC0.8□□□□□ -2.28
HLA-DRAP01903 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.8□□□□□ -2.28
HLA-DRAP01903 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.8□□□□□ -2.28
HLA-DRAP01903 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.8□□□□□ -2.28
HLA-DRAP01903 RPS4XP11-201ENST00000446897 772 ntBASIC0.8□□□□□ -2.28
HLA-DRAP01903 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.8□□□□□ -2.28
HLA-DRAP01903 AC104806.1-201ENST00000508720 308 ntBASIC0.8□□□□□ -2.28
HLA-DRAP01903 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.8□□□□□ -2.28
HLA-DRAP01903 RNU1-86P-201ENST00000516108 154 ntBASIC0.8□□□□□ -2.28
HLA-DRAP01903 RNU1-107P-201ENST00000516617 154 ntBASIC0.8□□□□□ -2.28
HLA-DRAP01903 DEFB108E-201ENST00000524692 240 ntBASIC0.8□□□□□ -2.28
HLA-DRAP01903 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.8□□□□□ -2.28
HLA-DRAP01903 AC087883.1-201ENST00000551882 391 ntBASIC0.8□□□□□ -2.28
HLA-DRAP01903 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.8□□□□□ -2.28
HLA-DRAP01903 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.8□□□□□ -2.28
HLA-DRAP01903 MIR3118-1-201ENST00000581787 76 ntBASIC0.8□□□□□ -2.28
HLA-DRAP01903 AL022345.2-201ENST00000606307 135 ntBASIC0.8□□□□□ -2.28
HLA-DRAP01903 BX284668.6-201ENST00000606899 438 ntBASIC0.8□□□□□ -2.28
HLA-DRAP01903 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.8□□□□□ -2.28
HLA-DRAP01903 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
HLA-DRAP01903 RNU6-862P-201ENST00000362804 105 ntBASIC0.79□□□□□ -2.28
HLA-DRAP01903 MIR194-1-201ENST00000384892 85 ntBASIC0.79□□□□□ -2.28
HLA-DRAP01903 MIR499A-201ENST00000384903 122 ntBASIC0.79□□□□□ -2.28
HLA-DRAP01903 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
HLA-DRAP01903 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
HLA-DRAP01903 C1DP2-201ENST00000418167 426 ntBASIC0.79□□□□□ -2.28
HLA-DRAP01903 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.79□□□□□ -2.28
HLA-DRAP01903 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.79□□□□□ -2.28
HLA-DRAP01903 RPS29P1-201ENST00000465274 159 ntBASIC0.79□□□□□ -2.28
HLA-DRAP01903 HMGN2P9-201ENST00000476875 229 ntBASIC0.79□□□□□ -2.28
HLA-DRAP01903 AC109446.1-201ENST00000566172 220 ntBASIC0.79□□□□□ -2.28
HLA-DRAP01903 MTATP6P3-201ENST00000581686 676 ntBASIC0.79□□□□□ -2.28
HLA-DRAP01903 MIR4452-201ENST00000583004 71 ntBASIC0.79□□□□□ -2.28
HLA-DRAP01903 AC110760.3-201ENST00000598794 467 ntBASIC0.79□□□□□ -2.28
HLA-DRAP01903 MIR3976-201ENST00000606807 139 ntBASIC0.79□□□□□ -2.28
HLA-DRAP01903 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC0.79□□□□□ -2.28
HLA-DRAP01903 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.79□□□□□ -2.28
HLA-DRAP01903 U4.7-201ENST00000638126 106 ntBASIC0.79□□□□□ -2.28
HLA-DRAP01903 RNU1-96P-201ENST00000364163 162 ntBASIC0.78□□□□□ -2.28
HLA-DRAP01903 COX6CP10-201ENST00000416832 224 ntBASIC0.78□□□□□ -2.28
HLA-DRAP01903 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.78□□□□□ -2.28
HLA-DRAP01903 HSPE1P13-201ENST00000451143 297 ntBASIC0.78□□□□□ -2.28
HLA-DRAP01903 AC007395.1-201ENST00000451333 677 ntBASIC0.78□□□□□ -2.28
HLA-DRAP01903 RPS26P45-201ENST00000471748 340 ntBASIC0.78□□□□□ -2.28
HLA-DRAP01903 MTCO3P28-201ENST00000513351 515 ntBASIC0.78□□□□□ -2.28
HLA-DRAP01903 RNA5SP337-201ENST00000517007 109 ntBASIC0.78□□□□□ -2.28
HLA-DRAP01903 RNU6-467P-201ENST00000517027 110 ntBASIC0.78□□□□□ -2.28
HLA-DRAP01903 RNA5SP503-201ENST00000517047 117 ntBASIC0.78□□□□□ -2.28
HLA-DRAP01903 AC105185.1-201ENST00000518705 535 ntBASIC0.78□□□□□ -2.28
HLA-DRAP01903 CYCSP23-201ENST00000519781 313 ntBASIC0.78□□□□□ -2.28
HLA-DRAP01903 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC0.78□□□□□ -2.28
HLA-DRAP01903 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC0.78□□□□□ -2.28
HLA-DRAP01903 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.78□□□□□ -2.28
HLA-DRAP01903 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC0.78□□□□□ -2.28
HLA-DRAP01903 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.78□□□□□ -2.28
HLA-DRAP01903 AC008752.3-201ENST00000588113 712 ntBASIC0.78□□□□□ -2.28
HLA-DRAP01903 AL365434.2-201ENST00000607979 234 ntBASIC0.78□□□□□ -2.28
HLA-DRAP01903 AC104073.3-201ENST00000610942 955 ntBASIC0.78□□□□□ -2.28
HLA-DRAP01903 AC097372.5-201ENST00000623665 376 ntBASIC0.78□□□□□ -2.28
HLA-DRAP01903 AL157786.1-207ENST00000627771 695 ntBASIC0.78□□□□□ -2.28
HLA-DRAP01903 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 204.2 ms