Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 RNU6-976P-201ENST00000516086 111 ntBASIC2.64□□□□□ -1.99
LDLRP01130 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.64□□□□□ -1.99
LDLRP01130 AC103810.1-201ENST00000579873 453 ntBASIC2.64□□□□□ -1.99
LDLRP01130 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.64□□□□□ -1.99
LDLRP01130 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.64□□□□□ -1.99
LDLRP01130 AC123912.5-201ENST00000605470 343 ntBASIC2.64□□□□□ -1.99
LDLRP01130 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.64□□□□□ -1.99
LDLRP01130 AC007485.1-201ENST00000616755 206 ntBASIC2.64□□□□□ -1.99
LDLRP01130 AL590808.1-201ENST00000618696 141 ntBASIC2.64□□□□□ -1.99
LDLRP01130 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.64□□□□□ -1.99
LDLRP01130 CDC27P3-201ENST00000635418 1910 ntBASIC2.64□□□□□ -1.99
LDLRP01130 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.63□□□□□ -1.99
LDLRP01130 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.63□□□□□ -1.99
LDLRP01130 RNU6-562P-201ENST00000362731 107 ntBASIC2.63□□□□□ -1.99
LDLRP01130 Y_RNA.158-201ENST00000363651 101 ntBASIC2.63□□□□□ -1.99
LDLRP01130 Y_RNA.193-201ENST00000363979 102 ntBASIC2.63□□□□□ -1.99
LDLRP01130 RNU1-100P-201ENST00000365255 165 ntBASIC2.63□□□□□ -1.99
LDLRP01130 RNU6-1040P-201ENST00000383974 107 ntBASIC2.63□□□□□ -1.99
LDLRP01130 RNU6-26P-201ENST00000383985 107 ntBASIC2.63□□□□□ -1.99
LDLRP01130 RNU6-890P-201ENST00000384121 107 ntBASIC2.63□□□□□ -1.99
LDLRP01130 Y_RNA.463-201ENST00000384271 102 ntBASIC2.63□□□□□ -1.99
LDLRP01130 RNU6-505P-201ENST00000384427 107 ntBASIC2.63□□□□□ -1.99
LDLRP01130 Y_RNA.496-201ENST00000384444 101 ntBASIC2.63□□□□□ -1.99
LDLRP01130 MIR504-201ENST00000385065 83 ntBASIC2.63□□□□□ -1.99
LDLRP01130 MRPL42P3-201ENST00000401492 326 ntBASIC2.63□□□□□ -1.99
LDLRP01130 FTH1P15-201ENST00000406984 280 ntBASIC2.63□□□□□ -1.99
LDLRP01130 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.63□□□□□ -1.99
LDLRP01130 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.63□□□□□ -1.99
LDLRP01130 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.63□□□□□ -1.99
LDLRP01130 MTCYBP9-201ENST00000431021 303 ntBASIC2.63□□□□□ -1.99
LDLRP01130 AL513043.1-201ENST00000439124 535 ntBASIC2.63□□□□□ -1.99
LDLRP01130 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.63□□□□□ -1.99
LDLRP01130 SNORD109B-201ENST00000458961 67 ntBASIC2.63□□□□□ -1.99
LDLRP01130 SNORD109A-201ENST00000459128 67 ntBASIC2.63□□□□□ -1.99
LDLRP01130 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.63□□□□□ -1.99
LDLRP01130 RPL23AP70-201ENST00000483361 460 ntBASIC2.63□□□□□ -1.99
LDLRP01130 MRPS36P2-201ENST00000512569 299 ntBASIC2.63□□□□□ -1.99
LDLRP01130 AC026782.1-201ENST00000512952 449 ntBASIC2.63□□□□□ -1.99
LDLRP01130 MTCO2P24-201ENST00000515611 426 ntBASIC2.63□□□□□ -1.99
LDLRP01130 Y_RNA.670-201ENST00000516255 105 ntBASIC2.63□□□□□ -1.99
LDLRP01130 RNU6-323P-201ENST00000521915 107 ntBASIC2.63□□□□□ -1.99
LDLRP01130 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.63□□□□□ -1.99
LDLRP01130 MIR3941-201ENST00000582572 103 ntBASIC2.63□□□□□ -1.99
LDLRP01130 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.63□□□□□ -1.99
LDLRP01130 AC008121.1-201ENST00000603244 268 ntBASIC2.63□□□□□ -1.99
LDLRP01130 RNU6-85P-201ENST00000605989 107 ntBASIC2.63□□□□□ -1.99
LDLRP01130 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.63□□□□□ -1.99
LDLRP01130 AC010378.1-201ENST00000619270 362 ntBASIC2.63□□□□□ -1.99
LDLRP01130 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.63□□□□□ -1.99
LDLRP01130 AC092608.2-201ENST00000624427 218 ntBASIC2.63□□□□□ -1.99
LDLRP01130 AC243829.7-201ENST00000633081 225 ntBASIC2.63□□□□□ -1.99
LDLRP01130 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.63□□□□□ -1.99
LDLRP01130 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
LDLRP01130 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
LDLRP01130 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
LDLRP01130 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
LDLRP01130 SET-203ENST00000372688 801 ntTSL 2 BASIC2.62□□□□□ -1.99
LDLRP01130 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
LDLRP01130 RNY1P14-201ENST00000384426 108 ntBASIC2.62□□□□□ -1.99
LDLRP01130 HMGB3P2-201ENST00000411913 584 ntBASIC2.62□□□□□ -1.99
LDLRP01130 AC114482.1-201ENST00000418010 247 ntBASIC2.62□□□□□ -1.99
LDLRP01130 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.62□□□□□ -1.99
LDLRP01130 AL513328.1-201ENST00000446460 224 ntBASIC2.62□□□□□ -1.99
LDLRP01130 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.62□□□□□ -1.99
LDLRP01130 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.62□□□□□ -1.99
LDLRP01130 AC116337.1-201ENST00000509680 687 ntBASIC2.62□□□□□ -1.99
LDLRP01130 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.62□□□□□ -1.99
LDLRP01130 RNU6-120P-201ENST00000516077 103 ntBASIC2.62□□□□□ -1.99
LDLRP01130 RNU6-1016P-201ENST00000516689 94 ntBASIC2.62□□□□□ -1.99
LDLRP01130 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.62□□□□□ -1.99
LDLRP01130 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.62□□□□□ -1.99
LDLRP01130 AP002770.2-201ENST00000543613 532 ntBASIC2.62□□□□□ -1.99
LDLRP01130 AC079600.2-201ENST00000550076 130 ntBASIC2.62□□□□□ -1.99
LDLRP01130 MIR3149-201ENST00000584629 83 ntBASIC2.62□□□□□ -1.99
LDLRP01130 ZNF861P-201ENST00000588126 639 ntBASIC2.62□□□□□ -1.99
LDLRP01130 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.62□□□□□ -1.99
LDLRP01130 AL356575.1-201ENST00000603008 283 ntBASIC2.62□□□□□ -1.99
LDLRP01130 AP000787.2-201ENST00000604432 568 ntBASIC2.62□□□□□ -1.99
LDLRP01130 AC005014.2-201ENST00000607795 599 ntBASIC2.62□□□□□ -1.99
LDLRP01130 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.62□□□□□ -1.99
LDLRP01130 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
LDLRP01130 AC083806.3-201ENST00000614016 455 ntBASIC2.62□□□□□ -1.99
LDLRP01130 MIR6128-201ENST00000615528 109 ntBASIC2.62□□□□□ -1.99
LDLRP01130 AC096644.4-201ENST00000563417 2912 ntBASIC2.62□□□□□ -1.99
LDLRP01130 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.62□□□□□ -1.99
LDLRP01130 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.61□□□□□ -1.99
LDLRP01130 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
LDLRP01130 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
LDLRP01130 Y_RNA.252-201ENST00000364556 101 ntBASIC2.61□□□□□ -1.99
LDLRP01130 Y_RNA.452-201ENST00000384202 108 ntBASIC2.61□□□□□ -1.99
LDLRP01130 RNU6-95P-201ENST00000384697 107 ntBASIC2.61□□□□□ -1.99
LDLRP01130 RNU6-19P-201ENST00000384718 107 ntBASIC2.61□□□□□ -1.99
LDLRP01130 RNU2-52P-201ENST00000410680 190 ntBASIC2.61□□□□□ -1.99
LDLRP01130 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.61□□□□□ -1.99
LDLRP01130 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.61□□□□□ -1.99
LDLRP01130 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.61□□□□□ -1.99
LDLRP01130 SNAP23P1-201ENST00000433229 246 ntBASIC2.61□□□□□ -1.99
LDLRP01130 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.61□□□□□ -1.99
LDLRP01130 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.61□□□□□ -1.99
LDLRP01130 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms