Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 AC013470.1-201ENST00000453438 462 ntBASIC2.62□□□□□ -1.99
DDX58O95786 AC104435.1-201ENST00000483483 166 ntBASIC2.62□□□□□ -1.99
DDX58O95786 Y_RNA.665-201ENST00000516177 98 ntBASIC2.62□□□□□ -1.99
DDX58O95786 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.62□□□□□ -1.99
DDX58O95786 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.62□□□□□ -1.99
DDX58O95786 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.62□□□□□ -1.99
DDX58O95786 AL161423.1-201ENST00000613700 262 ntBASIC2.62□□□□□ -1.99
DDX58O95786 AL159153.1-201ENST00000619688 317 ntBASIC2.62□□□□□ -1.99
DDX58O95786 ZNF355P-201ENST00000427301 3216 ntBASIC2.62□□□□□ -1.99
DDX58O95786 AC121333.1-201ENST00000567488 2709 ntBASIC2.62□□□□□ -1.99
DDX58O95786 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
DDX58O95786 Y_RNA.167-201ENST00000363735 109 ntBASIC2.61□□□□□ -1.99
DDX58O95786 RNU4-56P-201ENST00000364700 142 ntBASIC2.61□□□□□ -1.99
DDX58O95786 SNORA25B-201ENST00000365507 128 ntBASIC2.61□□□□□ -1.99
DDX58O95786 RNU1-148P-201ENST00000384472 162 ntBASIC2.61□□□□□ -1.99
DDX58O95786 AL591034.2-201ENST00000402839 359 ntBASIC2.61□□□□□ -1.99
DDX58O95786 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.61□□□□□ -1.99
DDX58O95786 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.61□□□□□ -1.99
DDX58O95786 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.61□□□□□ -1.99
DDX58O95786 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.61□□□□□ -1.99
DDX58O95786 SRIP2-201ENST00000428470 166 ntBASIC2.61□□□□□ -1.99
DDX58O95786 AL359672.1-201ENST00000442302 409 ntBASIC2.61□□□□□ -1.99
DDX58O95786 MTCO2P3-201ENST00000442543 421 ntBASIC2.61□□□□□ -1.99
DDX58O95786 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.61□□□□□ -1.99
DDX58O95786 RNU6-1037P-201ENST00000459571 107 ntBASIC2.61□□□□□ -1.99
DDX58O95786 AC007547.1-201ENST00000462177 490 ntBASIC2.61□□□□□ -1.99
DDX58O95786 HMGN2P26-201ENST00000463169 339 ntBASIC2.61□□□□□ -1.99
DDX58O95786 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.61□□□□□ -1.99
DDX58O95786 HMGB3P3-201ENST00000510526 400 ntBASIC2.61□□□□□ -1.99
DDX58O95786 SNORA4.4-201ENST00000515921 135 ntBASIC2.61□□□□□ -1.99
DDX58O95786 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.61□□□□□ -1.99
DDX58O95786 AP005597.4-201ENST00000526762 229 ntBASIC2.61□□□□□ -1.99
DDX58O95786 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
DDX58O95786 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.61□□□□□ -1.99
DDX58O95786 BNIP3P25-201ENST00000596023 559 ntBASIC2.61□□□□□ -1.99
DDX58O95786 VN1R107P-201ENST00000601784 209 ntBASIC2.61□□□□□ -1.99
DDX58O95786 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
DDX58O95786 AC007014.2-201ENST00000615581 479 ntBASIC2.61□□□□□ -1.99
DDX58O95786 U6atac.1-201ENST00000616025 117 ntBASIC2.61□□□□□ -1.99
DDX58O95786 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.61□□□□□ -1.99
DDX58O95786 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.61□□□□□ -1.99
DDX58O95786 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.6□□□□□ -1.99
DDX58O95786 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
DDX58O95786 RNU1-23P-201ENST00000363361 144 ntBASIC2.6□□□□□ -1.99
DDX58O95786 SNORA3A-201ENST00000364113 130 ntBASIC2.6□□□□□ -1.99
DDX58O95786 RPS29P13-201ENST00000402041 169 ntBASIC2.6□□□□□ -1.99
DDX58O95786 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.6□□□□□ -1.99
DDX58O95786 MIR1277-201ENST00000408536 78 ntBASIC2.6□□□□□ -1.99
DDX58O95786 Y_RNA.599-201ENST00000410489 109 ntBASIC2.6□□□□□ -1.99
DDX58O95786 RNU2-32P-201ENST00000411193 191 ntBASIC2.6□□□□□ -1.99
DDX58O95786 HMGB3P2-201ENST00000411913 584 ntBASIC2.6□□□□□ -1.99
DDX58O95786 AC009161.1-201ENST00000417306 376 ntBASIC2.6□□□□□ -1.99
DDX58O95786 HMGN2P3-201ENST00000433603 273 ntBASIC2.6□□□□□ -1.99
DDX58O95786 HMGN2P5-201ENST00000436882 273 ntBASIC2.6□□□□□ -1.99
DDX58O95786 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.6□□□□□ -1.99
DDX58O95786 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.6□□□□□ -1.99
DDX58O95786 RPL39P5-202ENST00000512505 151 ntBASIC2.6□□□□□ -1.99
DDX58O95786 HSPE1P4-201ENST00000550617 308 ntBASIC2.6□□□□□ -1.99
DDX58O95786 AC007375.1-201ENST00000554513 578 ntBASIC2.6□□□□□ -1.99
DDX58O95786 MIR5002-201ENST00000584713 97 ntBASIC2.6□□□□□ -1.99
DDX58O95786 AC009314.1-201ENST00000603871 304 ntBASIC2.6□□□□□ -1.99
DDX58O95786 ELOCP5-201ENST00000604924 333 ntBASIC2.6□□□□□ -1.99
DDX58O95786 CTHRC1P1-201ENST00000605383 469 ntBASIC2.6□□□□□ -1.99
DDX58O95786 AC064836.2-201ENST00000609491 462 ntBASIC2.6□□□□□ -1.99
DDX58O95786 AC063943.3-201ENST00000615562 356 ntBASIC2.6□□□□□ -1.99
DDX58O95786 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
DDX58O95786 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
DDX58O95786 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
DDX58O95786 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
DDX58O95786 SNORD113-7-201ENST00000363762 77 ntBASIC2.59□□□□□ -1.99
DDX58O95786 RNU6-1141P-201ENST00000364520 107 ntBASIC2.59□□□□□ -1.99
DDX58O95786 RNU6-1329P-201ENST00000365664 107 ntBASIC2.59□□□□□ -1.99
DDX58O95786 RNU6-546P-201ENST00000383991 107 ntBASIC2.59□□□□□ -1.99
DDX58O95786 Y_RNA.505-201ENST00000384489 102 ntBASIC2.59□□□□□ -1.99
DDX58O95786 RNU6-1274P-201ENST00000384557 107 ntBASIC2.59□□□□□ -1.99
DDX58O95786 RNU2-2P-201ENST00000410396 191 ntBASIC2.59□□□□□ -1.99
DDX58O95786 NDUFA5P4-201ENST00000436704 385 ntBASIC2.59□□□□□ -1.99
DDX58O95786 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.59□□□□□ -1.99
DDX58O95786 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.59□□□□□ -1.99
DDX58O95786 AL353752.1-201ENST00000454946 260 ntBASIC2.59□□□□□ -1.99
DDX58O95786 AC092436.3-201ENST00000511788 257 ntBASIC2.59□□□□□ -1.99
DDX58O95786 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.59□□□□□ -1.99
DDX58O95786 RNU5F-2P-201ENST00000516066 82 ntBASIC2.59□□□□□ -1.99
DDX58O95786 RN7SKP256-201ENST00000517201 314 ntBASIC2.59□□□□□ -1.99
DDX58O95786 MTND4LP26-201ENST00000518144 282 ntBASIC2.59□□□□□ -1.99
DDX58O95786 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.59□□□□□ -1.99
DDX58O95786 AC146944.4-201ENST00000602697 718 ntBASIC2.59□□□□□ -1.99
DDX58O95786 U2.15-201ENST00000611544 191 ntBASIC2.59□□□□□ -1.99
DDX58O95786 U2.16-201ENST00000613119 191 ntBASIC2.59□□□□□ -1.99
DDX58O95786 Y_RNA.783-201ENST00000613546 102 ntBASIC2.59□□□□□ -1.99
DDX58O95786 U2.12-201ENST00000613778 191 ntBASIC2.59□□□□□ -1.99
DDX58O95786 U2.20-201ENST00000613956 192 ntBASIC2.59□□□□□ -1.99
DDX58O95786 AC245884.12-201ENST00000615364 59 ntBASIC2.59□□□□□ -1.99
DDX58O95786 U2.9-201ENST00000615427 191 ntBASIC2.59□□□□□ -1.99
DDX58O95786 U2.11-201ENST00000616345 191 ntBASIC2.59□□□□□ -1.99
DDX58O95786 U2.2-201ENST00000616535 191 ntBASIC2.59□□□□□ -1.99
DDX58O95786 U2.3-201ENST00000617785 191 ntBASIC2.59□□□□□ -1.99
DDX58O95786 U2.19-201ENST00000618602 191 ntBASIC2.59□□□□□ -1.99
DDX58O95786 RNU2-1-201ENST00000618664 191 ntBASIC2.59□□□□□ -1.99
DDX58O95786 U2.6-201ENST00000619225 191 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms