Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 SNORA63D-201ENST00000364359 132 ntBASIC-0.31□□□□□ -2.46
POLR1AO95602 RNU6-1335P-201ENST00000365426 107 ntBASIC-0.31□□□□□ -2.46
POLR1AO95602 RNU4-48P-201ENST00000365559 182 ntBASIC-0.31□□□□□ -2.46
POLR1AO95602 RNU6-878P-201ENST00000384578 110 ntBASIC-0.31□□□□□ -2.46
POLR1AO95602 MIR153-2-201ENST00000385225 87 ntBASIC-0.31□□□□□ -2.46
POLR1AO95602 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.31□□□□□ -2.46
POLR1AO95602 AC011233.1-201ENST00000422812 283 ntBASIC-0.31□□□□□ -2.46
POLR1AO95602 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC-0.31□□□□□ -2.46
POLR1AO95602 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC-0.31□□□□□ -2.46
POLR1AO95602 AC073910.1-201ENST00000445047 438 ntBASIC-0.31□□□□□ -2.46
POLR1AO95602 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC-0.31□□□□□ -2.46
POLR1AO95602 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.31□□□□□ -2.46
POLR1AO95602 AC007363.1-201ENST00000604736 620 ntBASIC-0.31□□□□□ -2.46
POLR1AO95602 AC004853.1-201ENST00000604902 698 ntBASIC-0.31□□□□□ -2.46
POLR1AO95602 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC-0.31□□□□□ -2.46
POLR1AO95602 SNORD115-41-201ENST00000363608 82 ntBASIC-0.32□□□□□ -2.46
POLR1AO95602 SNORD49B-201ENST00000365172 72 ntBASIC-0.32□□□□□ -2.46
POLR1AO95602 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC-0.32□□□□□ -2.46
POLR1AO95602 RNA5SP504-201ENST00000410676 117 ntBASIC-0.32□□□□□ -2.46
POLR1AO95602 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.32□□□□□ -2.46
POLR1AO95602 AC060773.1-201ENST00000421698 310 ntBASIC-0.32□□□□□ -2.46
POLR1AO95602 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC-0.32□□□□□ -2.46
POLR1AO95602 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC-0.32□□□□□ -2.46
POLR1AO95602 UTP23-205ENST00000520733 369 ntTSL 3 BASIC-0.32□□□□□ -2.46
POLR1AO95602 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC-0.32□□□□□ -2.46
POLR1AO95602 AC022861.1-201ENST00000522981 663 ntBASIC-0.32□□□□□ -2.46
POLR1AO95602 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC-0.32□□□□□ -2.46
POLR1AO95602 AC090517.2-201ENST00000614966 680 ntBASIC-0.32□□□□□ -2.46
POLR1AO95602 RNU6-331P-201ENST00000384724 107 ntBASIC-0.33□□□□□ -2.46
POLR1AO95602 Y_RNA.597-201ENST00000410463 100 ntBASIC-0.33□□□□□ -2.46
POLR1AO95602 RNU6-947P-201ENST00000516264 106 ntBASIC-0.33□□□□□ -2.46
POLR1AO95602 RNU6-840P-201ENST00000517275 65 ntBASIC-0.33□□□□□ -2.46
POLR1AO95602 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC-0.33□□□□□ -2.46
POLR1AO95602 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC-0.33□□□□□ -2.46
POLR1AO95602 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC-0.33□□□□□ -2.46
POLR1AO95602 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.33□□□□□ -2.46
POLR1AO95602 MIR4764-201ENST00000580680 88 ntBASIC-0.33□□□□□ -2.46
POLR1AO95602 AC004009.2-201ENST00000623016 728 ntBASIC-0.33□□□□□ -2.46
POLR1AO95602 SEC63P2-201ENST00000503863 1939 ntBASIC-0.33□□□□□ -2.46
POLR1AO95602 Y_RNA.332-201ENST00000365271 113 ntBASIC-0.33□□□□□ -2.46
POLR1AO95602 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC-0.33□□□□□ -2.46
POLR1AO95602 RNU1-39P-201ENST00000383897 165 ntBASIC-0.33□□□□□ -2.46
POLR1AO95602 MIR29B2-201ENST00000385055 81 ntBASIC-0.33□□□□□ -2.46
POLR1AO95602 MIR644A-201ENST00000385262 94 ntBASIC-0.33□□□□□ -2.46
POLR1AO95602 MIR643-201ENST00000385267 97 ntBASIC-0.33□□□□□ -2.46
POLR1AO95602 AL357139.1-201ENST00000407792 426 ntBASIC-0.33□□□□□ -2.46
POLR1AO95602 MTND4LP11-201ENST00000422184 280 ntBASIC-0.33□□□□□ -2.46
POLR1AO95602 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC-0.33□□□□□ -2.46
POLR1AO95602 RNU6-320P-201ENST00000516511 106 ntBASIC-0.33□□□□□ -2.46
POLR1AO95602 AC106038.2-201ENST00000520706 568 ntBASIC-0.33□□□□□ -2.46
POLR1AO95602 RNY1P9-201ENST00000532431 109 ntBASIC-0.33□□□□□ -2.46
POLR1AO95602 AL353778.1-201ENST00000603149 408 ntBASIC-0.33□□□□□ -2.46
POLR1AO95602 AL355598.1-201ENST00000604169 202 ntBASIC-0.33□□□□□ -2.46
POLR1AO95602 AC011451.2-201ENST00000604303 598 ntBASIC-0.33□□□□□ -2.46
POLR1AO95602 SNORA25.3-201ENST00000363205 127 ntBASIC-0.34□□□□□ -2.46
POLR1AO95602 CBX3P9-201ENST00000402326 552 ntBASIC-0.34□□□□□ -2.46
POLR1AO95602 ELOCP9-201ENST00000418624 239 ntBASIC-0.34□□□□□ -2.46
POLR1AO95602 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC-0.34□□□□□ -2.46
POLR1AO95602 MTCO3P1-205ENST00000422088 832 ntBASIC-0.34□□□□□ -2.46
POLR1AO95602 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC-0.34□□□□□ -2.46
POLR1AO95602 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC-0.34□□□□□ -2.46
POLR1AO95602 AC002486.1-201ENST00000435098 391 ntBASIC-0.34□□□□□ -2.46
POLR1AO95602 AC243964.1-201ENST00000441814 261 ntBASIC-0.34□□□□□ -2.46
POLR1AO95602 RNU7-21P-201ENST00000459430 62 ntBASIC-0.34□□□□□ -2.46
POLR1AO95602 RNU6-1183P-201ENST00000517054 60 ntBASIC-0.34□□□□□ -2.46
POLR1AO95602 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC-0.34□□□□□ -2.46
POLR1AO95602 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC-0.34□□□□□ -2.46
POLR1AO95602 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC-0.34□□□□□ -2.46
POLR1AO95602 AL592221.1-201ENST00000605266 382 ntBASIC-0.34□□□□□ -2.46
POLR1AO95602 AL603758.1-201ENST00000618654 241 ntBASIC-0.34□□□□□ -2.46
POLR1AO95602 AC011155.2-201ENST00000623202 216 ntBASIC-0.34□□□□□ -2.46
POLR1AO95602 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.35□□□□□ -2.47
POLR1AO95602 AC009646.1-201ENST00000510455 318 ntBASIC-0.35□□□□□ -2.47
POLR1AO95602 RNU6-863P-201ENST00000515989 104 ntBASIC-0.35□□□□□ -2.47
POLR1AO95602 SNORA25.12-201ENST00000516202 82 ntBASIC-0.35□□□□□ -2.47
POLR1AO95602 RNU6-889P-201ENST00000517189 103 ntBASIC-0.35□□□□□ -2.47
POLR1AO95602 MIR4782-201ENST00000577987 79 ntBASIC-0.35□□□□□ -2.47
POLR1AO95602 AL020997.3-201ENST00000602843 359 ntBASIC-0.35□□□□□ -2.47
POLR1AO95602 PRELID3BP2-201ENST00000605362 201 ntBASIC-0.35□□□□□ -2.47
POLR1AO95602 RNU6-1274P-201ENST00000384557 107 ntBASIC-0.35□□□□□ -2.47
POLR1AO95602 MIR224-201ENST00000384889 81 ntBASIC-0.35□□□□□ -2.47
POLR1AO95602 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC-0.35□□□□□ -2.47
POLR1AO95602 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC-0.35□□□□□ -2.47
POLR1AO95602 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC-0.35□□□□□ -2.47
POLR1AO95602 UBE2V1P15-201ENST00000407776 448 ntBASIC-0.35□□□□□ -2.47
POLR1AO95602 GPM6BP2-201ENST00000432046 144 ntBASIC-0.35□□□□□ -2.47
POLR1AO95602 AC069257.2-201ENST00000441819 155 ntBASIC-0.35□□□□□ -2.47
POLR1AO95602 GPM6BP1-201ENST00000446387 144 ntBASIC-0.35□□□□□ -2.47
POLR1AO95602 AC114982.2-201ENST00000461396 358 ntBASIC-0.35□□□□□ -2.47
POLR1AO95602 HMGB1P30-201ENST00000492455 606 ntBASIC-0.35□□□□□ -2.47
POLR1AO95602 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC-0.35□□□□□ -2.47
POLR1AO95602 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC-0.35□□□□□ -2.47
POLR1AO95602 SUMO2P18-201ENST00000518873 252 ntBASIC-0.35□□□□□ -2.47
POLR1AO95602 BNIP3P24-201ENST00000593398 557 ntBASIC-0.35□□□□□ -2.47
POLR1AO95602 AC104408.1-201ENST00000605241 170 ntBASIC-0.35□□□□□ -2.47
POLR1AO95602 AC013244.3-201ENST00000605614 388 ntBASIC-0.35□□□□□ -2.47
POLR1AO95602 MIR3976-201ENST00000606807 139 ntBASIC-0.35□□□□□ -2.47
POLR1AO95602 AL451064.1-201ENST00000607718 471 ntBASIC-0.35□□□□□ -2.47
POLR1AO95602 AC097065.2-201ENST00000608159 533 ntBASIC-0.35□□□□□ -2.47
POLR1AO95602 RNU6ATAC35P-201ENST00000609276 444 ntBASIC-0.35□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms