Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 AC083904.1-201ENST00000487828 231 ntBASIC2.58□□□□□ -2
MBD4O95243 AC008628.2-201ENST00000502605 298 ntBASIC2.58□□□□□ -2
MBD4O95243 RNU7-193P-201ENST00000516723 65 ntBASIC2.58□□□□□ -2
MBD4O95243 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.58□□□□□ -2
MBD4O95243 AC104576.1-201ENST00000524225 88 ntBASIC2.58□□□□□ -2
MBD4O95243 MTND1P35-201ENST00000526739 508 ntBASIC2.58□□□□□ -2
MBD4O95243 AC100830.2-201ENST00000581636 240 ntBASIC2.58□□□□□ -2
MBD4O95243 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC2.58□□□□□ -2
MBD4O95243 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.58□□□□□ -2
MBD4O95243 SNRPGP17-201ENST00000603780 214 ntBASIC2.58□□□□□ -2
MBD4O95243 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.58□□□□□ -2
MBD4O95243 MTND4P23-201ENST00000447723 1363 ntBASIC2.58□□□□□ -2
MBD4O95243 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.57□□□□□ -2
MBD4O95243 Y_RNA.450-201ENST00000384198 113 ntBASIC2.57□□□□□ -2
MBD4O95243 Y_RNA.554-201ENST00000384672 102 ntBASIC2.57□□□□□ -2
MBD4O95243 BTF3L4P2-201ENST00000392798 346 ntBASIC2.57□□□□□ -2
MBD4O95243 MIR450B-201ENST00000401182 78 ntBASIC2.57□□□□□ -2
MBD4O95243 RNU6-373P-201ENST00000411247 98 ntBASIC2.57□□□□□ -2
MBD4O95243 UBE2V1P4-201ENST00000425374 344 ntBASIC2.57□□□□□ -2
MBD4O95243 NDUFA5P4-201ENST00000436704 385 ntBASIC2.57□□□□□ -2
MBD4O95243 TRBVA-201ENST00000498804 316 ntBASIC2.57□□□□□ -2
MBD4O95243 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.57□□□□□ -2
MBD4O95243 Y_RNA.665-201ENST00000516177 98 ntBASIC2.57□□□□□ -2
MBD4O95243 RNU6-567P-201ENST00000516746 107 ntBASIC2.57□□□□□ -2
MBD4O95243 RNU6-612P-201ENST00000516909 102 ntBASIC2.57□□□□□ -2
MBD4O95243 AC087241.2-201ENST00000535801 324 ntBASIC2.57□□□□□ -2
MBD4O95243 TRAV32-201ENST00000553993 340 ntBASIC2.57□□□□□ -2
MBD4O95243 AC064836.2-201ENST00000609491 462 ntBASIC2.57□□□□□ -2
MBD4O95243 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
MBD4O95243 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.57□□□□□ -2
MBD4O95243 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.57□□□□□ -2
MBD4O95243 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.56□□□□□ -2
MBD4O95243 RNU4-15P-201ENST00000362613 141 ntBASIC2.56□□□□□ -2
MBD4O95243 SNORD113-7-201ENST00000363762 77 ntBASIC2.56□□□□□ -2
MBD4O95243 RNU4-12P-201ENST00000365233 139 ntBASIC2.56□□□□□ -2
MBD4O95243 AL079342.1-201ENST00000401460 267 ntBASIC2.56□□□□□ -2
MBD4O95243 SNORD23.1-201ENST00000408212 104 ntBASIC2.56□□□□□ -2
MBD4O95243 IFNA20P-201ENST00000436840 528 ntBASIC2.56□□□□□ -2
MBD4O95243 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.56□□□□□ -2
MBD4O95243 AL513124.1-201ENST00000450410 614 ntBASIC2.56□□□□□ -2
MBD4O95243 AL137159.1-201ENST00000452808 512 ntBASIC2.56□□□□□ -2
MBD4O95243 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.56□□□□□ -2
MBD4O95243 AC114801.2-201ENST00000503825 781 ntBASIC2.56□□□□□ -2
MBD4O95243 SCOCP1-201ENST00000554676 349 ntBASIC2.56□□□□□ -2
MBD4O95243 AC021231.3-201ENST00000558497 370 ntBASIC2.56□□□□□ -2
MBD4O95243 AC078899.2-201ENST00000595282 212 ntBASIC2.56□□□□□ -2
MBD4O95243 AL031274.2-201ENST00000599419 203 ntBASIC2.56□□□□□ -2
MBD4O95243 MIR6895-201ENST00000613497 78 ntBASIC2.56□□□□□ -2
MBD4O95243 FAM157A-202ENST00000615155 405 ntBASIC2.56□□□□□ -2
MBD4O95243 AC063943.3-201ENST00000615562 356 ntBASIC2.56□□□□□ -2
MBD4O95243 AL132822.1-201ENST00000617063 513 ntBASIC2.56□□□□□ -2
MBD4O95243 AC012640.5-201ENST00000623897 319 ntBASIC2.56□□□□□ -2
MBD4O95243 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.56□□□□□ -2
MBD4O95243 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.56□□□□□ -2
MBD4O95243 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
MBD4O95243 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.55□□□□□ -2
MBD4O95243 Y_RNA.6-201ENST00000362350 114 ntBASIC2.55□□□□□ -2
MBD4O95243 RNU6-227P-201ENST00000362865 103 ntBASIC2.55□□□□□ -2
MBD4O95243 Y_RNA.373-201ENST00000365600 103 ntBASIC2.55□□□□□ -2
MBD4O95243 RNU6-128P-201ENST00000383976 107 ntBASIC2.55□□□□□ -2
MBD4O95243 Y_RNA.504-201ENST00000384481 104 ntBASIC2.55□□□□□ -2
MBD4O95243 Y_RNA.530-201ENST00000384587 101 ntBASIC2.55□□□□□ -2
MBD4O95243 SNORA40.19-201ENST00000390846 128 ntBASIC2.55□□□□□ -2
MBD4O95243 RNU2-48P-201ENST00000410694 191 ntBASIC2.55□□□□□ -2
MBD4O95243 MTND1P23-201ENST00000416931 372 ntBASIC2.55□□□□□ -2
MBD4O95243 GPM6BP3-201ENST00000442797 145 ntBASIC2.55□□□□□ -2
MBD4O95243 AC145146.1-201ENST00000496370 254 ntBASIC2.55□□□□□ -2
MBD4O95243 RNU6-1332P-201ENST00000516666 104 ntBASIC2.55□□□□□ -2
MBD4O95243 SNORA31.16-201ENST00000516773 139 ntBASIC2.55□□□□□ -2
MBD4O95243 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.55□□□□□ -2
MBD4O95243 AC233702.2-202ENST00000562547 291 ntBASIC2.55□□□□□ -2
MBD4O95243 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.55□□□□□ -2
MBD4O95243 MIR3923-201ENST00000579521 83 ntBASIC2.55□□□□□ -2
MBD4O95243 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.55□□□□□ -2
MBD4O95243 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.54□□□□□ -2
MBD4O95243 AP006437.1-201ENST00000641440 3685 ntBASIC2.54□□□□□ -2
MBD4O95243 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
MBD4O95243 Y_RNA.100-201ENST00000363141 102 ntBASIC2.54□□□□□ -2
MBD4O95243 RNU6-877P-201ENST00000383868 107 ntBASIC2.54□□□□□ -2
MBD4O95243 MTCYBP2-201ENST00000407745 171 ntBASIC2.54□□□□□ -2
MBD4O95243 Y_RNA.615-201ENST00000410769 117 ntBASIC2.54□□□□□ -2
MBD4O95243 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.54□□□□□ -2
MBD4O95243 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.54□□□□□ -2
MBD4O95243 RPL9P9-202ENST00000466501 579 ntBASIC2.54□□□□□ -2
MBD4O95243 AC025465.4-201ENST00000513422 638 ntBASIC2.54□□□□□ -2
MBD4O95243 SNORA31.25-201ENST00000517242 134 ntBASIC2.54□□□□□ -2
MBD4O95243 AC107953.1-201ENST00000522216 297 ntBASIC2.54□□□□□ -2
MBD4O95243 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.54□□□□□ -2
MBD4O95243 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.54□□□□□ -2
MBD4O95243 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.54□□□□□ -2
MBD4O95243 AC016256.1-201ENST00000547971 354 ntBASIC2.54□□□□□ -2
MBD4O95243 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.54□□□□□ -2
MBD4O95243 MIR4529-201ENST00000578110 78 ntBASIC2.54□□□□□ -2
MBD4O95243 AC068944.2-201ENST00000610373 403 ntBASIC2.54□□□□□ -2
MBD4O95243 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.54□□□□□ -2
MBD4O95243 AC024614.3-201ENST00000637860 256 ntBASIC2.54□□□□□ -2
MBD4O95243 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
MBD4O95243 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
MBD4O95243 SNORA46.1-201ENST00000391069 153 ntBASIC2.53□□□□□ -2
MBD4O95243 SNORA48.3-201ENST00000391081 134 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 140.9 ms