Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 RNU6-884P-201ENST00000363889 107 ntBASIC-0.24□□□□□ -2.45
USH2AO75445 RNU6-343P-201ENST00000364709 104 ntBASIC-0.24□□□□□ -2.45
USH2AO75445 MIR593-201ENST00000384856 100 ntBASIC-0.24□□□□□ -2.45
USH2AO75445 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC-0.24□□□□□ -2.45
USH2AO75445 AL158050.1-201ENST00000416077 457 ntBASIC-0.24□□□□□ -2.45
USH2AO75445 AC139712.2-201ENST00000424302 339 ntBASIC-0.24□□□□□ -2.45
USH2AO75445 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-0.24□□□□□ -2.45
USH2AO75445 MTCO3P9-201ENST00000506989 781 ntBASIC-0.24□□□□□ -2.45
USH2AO75445 AC022616.8-201ENST00000533569 253 ntBASIC-0.24□□□□□ -2.45
USH2AO75445 AC092104.1-201ENST00000497346 1441 ntBASIC-0.24□□□□□ -2.45
USH2AO75445 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.24□□□□□ -2.45
USH2AO75445 MTCO3P17-201ENST00000443775 513 ntBASIC-0.24□□□□□ -2.45
USH2AO75445 AC007215.1-201ENST00000464893 276 ntBASIC-0.24□□□□□ -2.45
USH2AO75445 AC008628.1-201ENST00000508663 265 ntBASIC-0.24□□□□□ -2.45
USH2AO75445 AC125611.1-201ENST00000549563 229 ntBASIC-0.24□□□□□ -2.45
USH2AO75445 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC-0.24□□□□□ -2.45
USH2AO75445 AC140658.3-201ENST00000567603 271 ntBASIC-0.24□□□□□ -2.45
USH2AO75445 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC-0.24□□□□□ -2.45
USH2AO75445 U4atac.1-201ENST00000618345 95 ntBASIC-0.24□□□□□ -2.45
USH2AO75445 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-0.24□□□□□ -2.45
USH2AO75445 MTND4P4-201ENST00000439033 1366 ntBASIC-0.24□□□□□ -2.45
USH2AO75445 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.24□□□□□ -2.45
USH2AO75445 SNORA3B-201ENST00000391305 131 ntBASIC-0.24□□□□□ -2.45
USH2AO75445 SNORA75.6-201ENST00000391318 127 ntBASIC-0.24□□□□□ -2.45
USH2AO75445 AL603865.2-201ENST00000401679 213 ntBASIC-0.24□□□□□ -2.45
USH2AO75445 OR51AB1P-201ENST00000429046 620 ntBASIC-0.24□□□□□ -2.45
USH2AO75445 AL392003.1-201ENST00000434394 243 ntBASIC-0.24□□□□□ -2.45
USH2AO75445 AL162395.1-201ENST00000457882 422 ntBASIC-0.24□□□□□ -2.45
USH2AO75445 AP003392.2-201ENST00000527269 208 ntBASIC-0.24□□□□□ -2.45
USH2AO75445 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC-0.24□□□□□ -2.45
USH2AO75445 AC122134.1-202ENST00000569111 1201 ntBASIC-0.24□□□□□ -2.45
USH2AO75445 AL357094.1-201ENST00000603845 844 ntBASIC-0.24□□□□□ -2.45
USH2AO75445 AL138963.2-201ENST00000605137 226 ntBASIC-0.24□□□□□ -2.45
USH2AO75445 MTND5P16-201ENST00000460269 1703 ntBASIC-0.25□□□□□ -2.45
USH2AO75445 Y_RNA.39-201ENST00000362620 98 ntBASIC-0.25□□□□□ -2.45
USH2AO75445 SNORA36A-201ENST00000384221 132 ntBASIC-0.25□□□□□ -2.45
USH2AO75445 SNORA24.1-201ENST00000384401 135 ntBASIC-0.25□□□□□ -2.45
USH2AO75445 RNU6-925P-201ENST00000384629 104 ntBASIC-0.25□□□□□ -2.45
USH2AO75445 AL590002.1-201ENST00000406554 418 ntBASIC-0.25□□□□□ -2.45
USH2AO75445 AL160275.3-201ENST00000423876 471 ntBASIC-0.25□□□□□ -2.45
USH2AO75445 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC-0.25□□□□□ -2.45
USH2AO75445 AL049714.1-201ENST00000466686 347 ntBASIC-0.25□□□□□ -2.45
USH2AO75445 MTCO3P7-201ENST00000510008 774 ntBASIC-0.25□□□□□ -2.45
USH2AO75445 AC027338.1-201ENST00000514840 825 ntBASIC-0.25□□□□□ -2.45
USH2AO75445 SNORA31.4-201ENST00000516049 129 ntBASIC-0.25□□□□□ -2.45
USH2AO75445 AC069113.3-201ENST00000521019 150 ntBASIC-0.25□□□□□ -2.45
USH2AO75445 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC-0.25□□□□□ -2.45
USH2AO75445 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC-0.25□□□□□ -2.45
USH2AO75445 AC005951.2-201ENST00000576282 495 ntBASIC-0.25□□□□□ -2.45
USH2AO75445 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.25□□□□□ -2.45
USH2AO75445 Z82243.1-201ENST00000609432 473 ntBASIC-0.25□□□□□ -2.45
USH2AO75445 MIR5739-201ENST00000619803 80 ntBASIC-0.25□□□□□ -2.45
USH2AO75445 Z99571.1-201ENST00000636677 394 ntBASIC-0.25□□□□□ -2.45
USH2AO75445 RNU1-76P-201ENST00000362903 159 ntBASIC-0.25□□□□□ -2.45
USH2AO75445 Y_RNA.364-201ENST00000365532 101 ntBASIC-0.25□□□□□ -2.45
USH2AO75445 RNU6-116P-201ENST00000384042 109 ntBASIC-0.25□□□□□ -2.45
USH2AO75445 RNA5SP482-201ENST00000391269 118 ntBASIC-0.25□□□□□ -2.45
USH2AO75445 AL390237.1-201ENST00000404226 1415 ntBASIC-0.25□□□□□ -2.45
USH2AO75445 NDUFS5P4-201ENST00000412983 318 ntBASIC-0.25□□□□□ -2.45
USH2AO75445 AL359385.1-201ENST00000456509 365 ntBASIC-0.25□□□□□ -2.45
USH2AO75445 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-0.25□□□□□ -2.45
USH2AO75445 AC093809.1-201ENST00000509155 340 ntBASIC-0.25□□□□□ -2.45
USH2AO75445 MRPS36P2-201ENST00000512569 299 ntBASIC-0.25□□□□□ -2.45
USH2AO75445 RNA5SP272-201ENST00000516095 111 ntBASIC-0.25□□□□□ -2.45
USH2AO75445 AC026421.1-201ENST00000519101 163 ntBASIC-0.25□□□□□ -2.45
USH2AO75445 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC-0.25□□□□□ -2.45
USH2AO75445 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC-0.25□□□□□ -2.45
USH2AO75445 AC112693.2-201ENST00000556538 232 ntBASIC-0.25□□□□□ -2.45
USH2AO75445 AC027104.1-201ENST00000563702 681 ntBASIC-0.25□□□□□ -2.45
USH2AO75445 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC-0.25□□□□□ -2.45
USH2AO75445 TARS-215ENST00000626210 201 ntTSL 5 BASIC-0.25□□□□□ -2.45
USH2AO75445 RNU4-79P-201ENST00000362764 141 ntBASIC-0.25□□□□□ -2.45
USH2AO75445 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC-0.25□□□□□ -2.45
USH2AO75445 AL031779.1-201ENST00000415663 330 ntBASIC-0.25□□□□□ -2.45
USH2AO75445 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC-0.25□□□□□ -2.45
USH2AO75445 AC132479.1-201ENST00000449160 144 ntBASIC-0.25□□□□□ -2.45
USH2AO75445 Z82190.1-201ENST00000454534 490 ntBASIC-0.25□□□□□ -2.45
USH2AO75445 snoU13.13-201ENST00000458842 104 ntBASIC-0.25□□□□□ -2.45
USH2AO75445 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-0.25□□□□□ -2.45
USH2AO75445 UBE2Q2P8-201ENST00000560644 102 ntBASIC-0.25□□□□□ -2.45
USH2AO75445 MIR3664-201ENST00000579074 99 ntBASIC-0.25□□□□□ -2.45
USH2AO75445 AC004223.4-201ENST00000612426 332 ntBASIC-0.25□□□□□ -2.45
USH2AO75445 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.25□□□□□ -2.45
USH2AO75445 RNU6-83P-201ENST00000384568 112 ntBASIC-0.25□□□□□ -2.45
USH2AO75445 SNORA48.1-201ENST00000390879 135 ntBASIC-0.25□□□□□ -2.45
USH2AO75445 AC016831.2-201ENST00000417179 352 ntBASIC-0.25□□□□□ -2.45
USH2AO75445 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC-0.25□□□□□ -2.45
USH2AO75445 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC-0.25□□□□□ -2.45
USH2AO75445 AC104332.1-201ENST00000440471 797 ntBASIC-0.25□□□□□ -2.45
USH2AO75445 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC-0.25□□□□□ -2.45
USH2AO75445 RNU7-165P-201ENST00000458864 60 ntBASIC-0.25□□□□□ -2.45
USH2AO75445 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC-0.25□□□□□ -2.45
USH2AO75445 AC004062.1-201ENST00000509926 645 ntBASIC-0.25□□□□□ -2.45
USH2AO75445 Y_RNA.715-201ENST00000517082 110 ntBASIC-0.25□□□□□ -2.45
USH2AO75445 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC-0.25□□□□□ -2.45
USH2AO75445 SNRPGP20-201ENST00000604477 205 ntBASIC-0.25□□□□□ -2.45
USH2AO75445 AL355816.1-201ENST00000607951 118 ntBASIC-0.25□□□□□ -2.45
USH2AO75445 AL445584.3-201ENST00000617173 78 ntBASIC-0.25□□□□□ -2.45
USH2AO75445 SNORD1A-201ENST00000364968 72 ntBASIC-0.26□□□□□ -2.45
USH2AO75445 MT-TY-201ENST00000387409 66 ntBASIC-0.26□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms