Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 RNU6-546P-201ENST00000383991 107 ntBASIC1.83□□□□□ -2.12
TRIM3O75382 SNORD73A-201ENST00000386062 65 ntBASIC1.83□□□□□ -2.12
TRIM3O75382 CALM2P3-201ENST00000400429 449 ntBASIC1.83□□□□□ -2.12
TRIM3O75382 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.83□□□□□ -2.12
TRIM3O75382 RNU2-48P-201ENST00000410694 191 ntBASIC1.83□□□□□ -2.12
TRIM3O75382 RNU2-16P-201ENST00000410712 136 ntBASIC1.83□□□□□ -2.12
TRIM3O75382 AC244636.1-201ENST00000421152 228 ntBASIC1.83□□□□□ -2.12
TRIM3O75382 RPL31P63-201ENST00000422565 375 ntBASIC1.83□□□□□ -2.12
TRIM3O75382 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.83□□□□□ -2.12
TRIM3O75382 AC027124.2-201ENST00000428249 105 ntBASIC1.83□□□□□ -2.12
TRIM3O75382 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.83□□□□□ -2.12
TRIM3O75382 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.83□□□□□ -2.12
TRIM3O75382 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.83□□□□□ -2.12
TRIM3O75382 AC083798.1-201ENST00000472671 131 ntBASIC1.83□□□□□ -2.12
TRIM3O75382 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.83□□□□□ -2.12
TRIM3O75382 AC079140.5-201ENST00000507882 310 ntBASIC1.83□□□□□ -2.12
TRIM3O75382 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.83□□□□□ -2.12
TRIM3O75382 CYCSP27-201ENST00000527643 293 ntBASIC1.83□□□□□ -2.12
TRIM3O75382 AC024909.2-201ENST00000553035 286 ntBASIC1.83□□□□□ -2.12
TRIM3O75382 BNIP3P16-201ENST00000589779 534 ntBASIC1.83□□□□□ -2.12
TRIM3O75382 AL158827.2-201ENST00000602494 330 ntBASIC1.83□□□□□ -2.12
TRIM3O75382 AL691447.3-201ENST00000635020 330 ntBASIC1.83□□□□□ -2.12
TRIM3O75382 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.82□□□□□ -2.12
TRIM3O75382 RNU6-1285P-201ENST00000363480 105 ntBASIC1.82□□□□□ -2.12
TRIM3O75382 RNU6-1085P-201ENST00000363576 107 ntBASIC1.82□□□□□ -2.12
TRIM3O75382 Y_RNA.194-201ENST00000363985 102 ntBASIC1.82□□□□□ -2.12
TRIM3O75382 Y_RNA.378-201ENST00000365652 113 ntBASIC1.82□□□□□ -2.12
TRIM3O75382 RNU6-43P-201ENST00000384302 107 ntBASIC1.82□□□□□ -2.12
TRIM3O75382 MIR29B2-201ENST00000385055 81 ntBASIC1.82□□□□□ -2.12
TRIM3O75382 RNA5SP489-201ENST00000410986 109 ntBASIC1.82□□□□□ -2.12
TRIM3O75382 RPS15AP10-201ENST00000432472 382 ntBASIC1.82□□□□□ -2.12
TRIM3O75382 HMGN2P3-201ENST00000433603 273 ntBASIC1.82□□□□□ -2.12
TRIM3O75382 HMGN2P5-201ENST00000436882 273 ntBASIC1.82□□□□□ -2.12
TRIM3O75382 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.82□□□□□ -2.12
TRIM3O75382 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.82□□□□□ -2.12
TRIM3O75382 TPTE2P5-203ENST00000458118 728 ntBASIC1.82□□□□□ -2.12
TRIM3O75382 AC009646.1-201ENST00000510455 318 ntBASIC1.82□□□□□ -2.12
TRIM3O75382 RN7SKP256-201ENST00000517201 314 ntBASIC1.82□□□□□ -2.12
TRIM3O75382 COPS8P3-201ENST00000526024 482 ntBASIC1.82□□□□□ -2.12
TRIM3O75382 NDUFA5P6-201ENST00000542110 379 ntBASIC1.82□□□□□ -2.12
TRIM3O75382 AL118558.2-201ENST00000556294 238 ntBASIC1.82□□□□□ -2.12
TRIM3O75382 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.82□□□□□ -2.12
TRIM3O75382 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.82□□□□□ -2.12
TRIM3O75382 MIR3122-201ENST00000577243 73 ntBASIC1.82□□□□□ -2.12
TRIM3O75382 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.82□□□□□ -2.12
TRIM3O75382 AC080013.6-201ENST00000606185 215 ntBASIC1.82□□□□□ -2.12
TRIM3O75382 AC009318.2-201ENST00000610917 651 ntBASIC1.82□□□□□ -2.12
TRIM3O75382 RNU6-1322P-201ENST00000364309 107 ntBASIC1.81□□□□□ -2.12
TRIM3O75382 RNU4-20P-201ENST00000365601 151 ntBASIC1.81□□□□□ -2.12
TRIM3O75382 RNU6-38P-201ENST00000384085 107 ntBASIC1.81□□□□□ -2.12
TRIM3O75382 SNORA40.19-201ENST00000390846 128 ntBASIC1.81□□□□□ -2.12
TRIM3O75382 RNU6-780P-201ENST00000391030 104 ntBASIC1.81□□□□□ -2.12
TRIM3O75382 RPS29P13-201ENST00000402041 169 ntBASIC1.81□□□□□ -2.12
TRIM3O75382 USP9YP18-201ENST00000425912 695 ntBASIC1.81□□□□□ -2.12
TRIM3O75382 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.81□□□□□ -2.12
TRIM3O75382 IFNA20P-201ENST00000436840 528 ntBASIC1.81□□□□□ -2.12
TRIM3O75382 AL137159.1-201ENST00000452808 512 ntBASIC1.81□□□□□ -2.12
TRIM3O75382 RNU6-333P-201ENST00000459117 107 ntBASIC1.81□□□□□ -2.12
TRIM3O75382 RPL39P5-202ENST00000512505 151 ntBASIC1.81□□□□□ -2.12
TRIM3O75382 SNORA14.1-201ENST00000516113 141 ntBASIC1.81□□□□□ -2.12
TRIM3O75382 RNU6-189P-201ENST00000516120 101 ntBASIC1.81□□□□□ -2.12
TRIM3O75382 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.81□□□□□ -2.12
TRIM3O75382 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.81□□□□□ -2.12
TRIM3O75382 MIR5089-201ENST00000580047 84 ntBASIC1.81□□□□□ -2.12
TRIM3O75382 MIR3941-201ENST00000582572 103 ntBASIC1.81□□□□□ -2.12
TRIM3O75382 AC092747.3-201ENST00000603769 301 ntBASIC1.81□□□□□ -2.12
TRIM3O75382 SNRPGP19-201ENST00000603826 189 ntBASIC1.81□□□□□ -2.12
TRIM3O75382 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
TRIM3O75382 AL132822.1-201ENST00000617063 513 ntBASIC1.81□□□□□ -2.12
TRIM3O75382 SNORD98-201ENST00000636377 67 ntBASIC1.81□□□□□ -2.12
TRIM3O75382 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
TRIM3O75382 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
TRIM3O75382 SNORA12-201ENST00000391162 147 ntBASIC1.8□□□□□ -2.12
TRIM3O75382 MIR1289-2-201ENST00000408360 111 ntBASIC1.8□□□□□ -2.12
TRIM3O75382 POLHP1-201ENST00000411806 470 ntBASIC1.8□□□□□ -2.12
TRIM3O75382 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.8□□□□□ -2.12
TRIM3O75382 AL590135.1-201ENST00000422215 156 ntBASIC1.8□□□□□ -2.12
TRIM3O75382 AL590556.1-201ENST00000423231 483 ntBASIC1.8□□□□□ -2.12
TRIM3O75382 AC019205.3-201ENST00000424573 156 ntBASIC1.8□□□□□ -2.12
TRIM3O75382 HSPE1P21-201ENST00000438283 308 ntBASIC1.8□□□□□ -2.12
TRIM3O75382 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.8□□□□□ -2.12
TRIM3O75382 AC016700.2-201ENST00000446011 156 ntBASIC1.8□□□□□ -2.12
TRIM3O75382 PRELID3BP1-201ENST00000457142 540 ntBASIC1.8□□□□□ -2.12
TRIM3O75382 RNU6-261P-201ENST00000459506 102 ntBASIC1.8□□□□□ -2.12
TRIM3O75382 AC015911.1-201ENST00000495111 156 ntBASIC1.8□□□□□ -2.12
TRIM3O75382 MIR449C-201ENST00000516047 92 ntBASIC1.8□□□□□ -2.12
TRIM3O75382 SNORA31.16-201ENST00000516773 139 ntBASIC1.8□□□□□ -2.12
TRIM3O75382 Y_RNA.704-201ENST00000516851 102 ntBASIC1.8□□□□□ -2.12
TRIM3O75382 RNU6-835P-201ENST00000516974 104 ntBASIC1.8□□□□□ -2.12
TRIM3O75382 CENPUP1-201ENST00000526649 1202 ntBASIC1.8□□□□□ -2.12
TRIM3O75382 AC115990.1-201ENST00000526957 301 ntBASIC1.8□□□□□ -2.12
TRIM3O75382 AC022616.8-201ENST00000533569 253 ntBASIC1.8□□□□□ -2.12
TRIM3O75382 HSPE1P4-201ENST00000550617 308 ntBASIC1.8□□□□□ -2.12
TRIM3O75382 AL512360.1-201ENST00000555346 234 ntBASIC1.8□□□□□ -2.12
TRIM3O75382 AC103987.3-201ENST00000582071 292 ntBASIC1.8□□□□□ -2.12
TRIM3O75382 AL078605.1-201ENST00000603529 500 ntBASIC1.8□□□□□ -2.12
TRIM3O75382 SNRPGP17-201ENST00000603780 214 ntBASIC1.8□□□□□ -2.12
TRIM3O75382 AL034555.1-201ENST00000604816 211 ntBASIC1.8□□□□□ -2.12
TRIM3O75382 AL121757.2-201ENST00000611223 313 ntBASIC1.8□□□□□ -2.12
TRIM3O75382 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms