Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.87□□□□□ -1.79
VAMP4O75379 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.87□□□□□ -1.79
VAMP4O75379 Y_RNA.105-201ENST00000363182 111 ntBASIC3.87□□□□□ -1.79
VAMP4O75379 SNORD115-32-201ENST00000364079 82 ntBASIC3.87□□□□□ -1.79
VAMP4O75379 SNORA71.1-201ENST00000364523 117 ntBASIC3.87□□□□□ -1.79
VAMP4O75379 RNU1-100P-201ENST00000365255 165 ntBASIC3.87□□□□□ -1.79
VAMP4O75379 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.87□□□□□ -1.79
VAMP4O75379 RNU6-1286P-201ENST00000383871 107 ntBASIC3.87□□□□□ -1.79
VAMP4O75379 RNU6-968P-201ENST00000384076 107 ntBASIC3.87□□□□□ -1.79
VAMP4O75379 RNU6-17P-201ENST00000384245 107 ntBASIC3.87□□□□□ -1.79
VAMP4O75379 RNU6-18P-201ENST00000384527 107 ntBASIC3.87□□□□□ -1.79
VAMP4O75379 SNORA46-201ENST00000384762 135 ntBASIC3.87□□□□□ -1.79
VAMP4O75379 SNORA48.5-201ENST00000391143 135 ntBASIC3.87□□□□□ -1.79
VAMP4O75379 RNU2-38P-201ENST00000410856 79 ntBASIC3.87□□□□□ -1.79
VAMP4O75379 RNU6-1245P-201ENST00000411130 106 ntBASIC3.87□□□□□ -1.79
VAMP4O75379 AC074117.2-201ENST00000417130 397 ntBASIC3.87□□□□□ -1.79
VAMP4O75379 RPL21P40-201ENST00000428586 483 ntBASIC3.87□□□□□ -1.79
VAMP4O75379 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.87□□□□□ -1.79
VAMP4O75379 CYCSP32-201ENST00000440548 321 ntBASIC3.87□□□□□ -1.79
VAMP4O75379 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.87□□□□□ -1.79
VAMP4O75379 RNU7-87P-201ENST00000459343 62 ntBASIC3.87□□□□□ -1.79
VAMP4O75379 RPL27AP5-201ENST00000469428 449 ntBASIC3.87□□□□□ -1.79
VAMP4O75379 AC006483.1-201ENST00000487308 313 ntBASIC3.87□□□□□ -1.79
VAMP4O75379 AC097462.2-201ENST00000504623 481 ntBASIC3.87□□□□□ -1.79
VAMP4O75379 SNORA74D-201ENST00000516404 141 ntBASIC3.87□□□□□ -1.79
VAMP4O75379 SNORD59.2-201ENST00000516873 68 ntBASIC3.87□□□□□ -1.79
VAMP4O75379 MRPS36P4-201ENST00000534436 298 ntBASIC3.87□□□□□ -1.79
VAMP4O75379 AC010928.2-201ENST00000588017 287 ntBASIC3.87□□□□□ -1.79
VAMP4O75379 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.87□□□□□ -1.79
VAMP4O75379 RPL23AP88-201ENST00000605759 454 ntBASIC3.87□□□□□ -1.79
VAMP4O75379 AC096772.1-201ENST00000609146 564 ntBASIC3.87□□□□□ -1.79
VAMP4O75379 RMST_6.1-201ENST00000611980 203 ntBASIC3.87□□□□□ -1.79
VAMP4O75379 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.87□□□□□ -1.79
VAMP4O75379 AL353746.1-201ENST00000566293 6881 ntBASIC3.87□□□□□ -1.79
VAMP4O75379 ZNF826P-207ENST00000622273 1910 ntBASIC3.87□□□□□ -1.79
VAMP4O75379 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VAMP4O75379 CUL1P1-201ENST00000509510 2425 ntBASIC3.86□□□□□ -1.79
VAMP4O75379 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
VAMP4O75379 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
VAMP4O75379 RNU6-212P-201ENST00000362642 104 ntBASIC3.86□□□□□ -1.79
VAMP4O75379 SNORA20.1-201ENST00000364790 130 ntBASIC3.86□□□□□ -1.79
VAMP4O75379 Y_RNA.478-201ENST00000384358 107 ntBASIC3.86□□□□□ -1.79
VAMP4O75379 MIR128-1-201ENST00000384921 82 ntBASIC3.86□□□□□ -1.79
VAMP4O75379 SNORD115-46-201ENST00000390982 71 ntBASIC3.86□□□□□ -1.79
VAMP4O75379 RPL23AP95-201ENST00000426806 265 ntBASIC3.86□□□□□ -1.79
VAMP4O75379 Z82188.1-201ENST00000436709 154 ntBASIC3.86□□□□□ -1.79
VAMP4O75379 AC007969.2-201ENST00000441891 191 ntBASIC3.86□□□□□ -1.79
VAMP4O75379 AC009296.1-201ENST00000443146 155 ntBASIC3.86□□□□□ -1.79
VAMP4O75379 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.86□□□□□ -1.79
VAMP4O75379 AC068657.1-201ENST00000520807 306 ntBASIC3.86□□□□□ -1.79
VAMP4O75379 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.86□□□□□ -1.79
VAMP4O75379 AL133393.1-201ENST00000603277 287 ntBASIC3.86□□□□□ -1.79
VAMP4O75379 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.86□□□□□ -1.79
VAMP4O75379 U6.92-201ENST00000636464 89 ntBASIC3.86□□□□□ -1.79
VAMP4O75379 AL353743.1-202ENST00000431724 1695 ntBASIC3.86□□□□□ -1.79
VAMP4O75379 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
VAMP4O75379 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.86□□□□□ -1.79
VAMP4O75379 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.86□□□□□ -1.79
VAMP4O75379 MTND5P6-201ENST00000422338 1798 ntBASIC3.86□□□□□ -1.79
VAMP4O75379 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
VAMP4O75379 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
VAMP4O75379 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
VAMP4O75379 SNORD32A-201ENST00000364805 84 ntBASIC3.85□□□□□ -1.79
VAMP4O75379 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.85□□□□□ -1.79
VAMP4O75379 Y_RNA.439-201ENST00000384119 94 ntBASIC3.85□□□□□ -1.79
VAMP4O75379 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.85□□□□□ -1.79
VAMP4O75379 RPS26P21-201ENST00000475397 348 ntBASIC3.85□□□□□ -1.79
VAMP4O75379 RPS27AP10-201ENST00000496103 208 ntBASIC3.85□□□□□ -1.79
VAMP4O75379 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.85□□□□□ -1.79
VAMP4O75379 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.85□□□□□ -1.79
VAMP4O75379 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.85□□□□□ -1.79
VAMP4O75379 AL451007.1-201ENST00000595491 289 ntBASIC3.85□□□□□ -1.79
VAMP4O75379 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.85□□□□□ -1.79
VAMP4O75379 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.85□□□□□ -1.79
VAMP4O75379 SDR42E1P4-201ENST00000620894 481 ntBASIC3.85□□□□□ -1.79
VAMP4O75379 AC097372.5-201ENST00000623665 376 ntBASIC3.85□□□□□ -1.79
VAMP4O75379 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VAMP4O75379 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.84□□□□□ -1.79
VAMP4O75379 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.84□□□□□ -1.79
VAMP4O75379 MIR335-201ENST00000362173 94 ntBASIC3.84□□□□□ -1.79
VAMP4O75379 SNORD116-20-201ENST00000384529 92 ntBASIC3.84□□□□□ -1.79
VAMP4O75379 RNU6-1203P-201ENST00000410703 110 ntBASIC3.84□□□□□ -1.79
VAMP4O75379 RNU2-25P-201ENST00000411041 191 ntBASIC3.84□□□□□ -1.79
VAMP4O75379 RPL21P38-201ENST00000418090 167 ntBASIC3.84□□□□□ -1.79
VAMP4O75379 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.84□□□□□ -1.79
VAMP4O75379 RPL23AP83-201ENST00000434984 473 ntBASIC3.84□□□□□ -1.79
VAMP4O75379 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.84□□□□□ -1.79
VAMP4O75379 U8.22-201ENST00000459141 133 ntBASIC3.84□□□□□ -1.79
VAMP4O75379 RPL30P1-201ENST00000488676 339 ntBASIC3.84□□□□□ -1.79
VAMP4O75379 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.84□□□□□ -1.79
VAMP4O75379 RNU6-1012P-201ENST00000516606 109 ntBASIC3.84□□□□□ -1.79
VAMP4O75379 RNU6-570P-201ENST00000517051 105 ntBASIC3.84□□□□□ -1.79
VAMP4O75379 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.84□□□□□ -1.79
VAMP4O75379 AC091953.5-201ENST00000622919 233 ntBASIC3.84□□□□□ -1.79
VAMP4O75379 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
VAMP4O75379 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
VAMP4O75379 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.8
VAMP4O75379 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
VAMP4O75379 LINC02555-201ENST00000563933 1951 ntBASIC3.83□□□□□ -1.8
VAMP4O75379 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms