Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.1□□□□□ -1.91
VPS4BO75351 AL450472.1-202ENST00000637286 180 ntBASIC3.1□□□□□ -1.91
VPS4BO75351 AC233981.2-201ENST00000611524 1614 ntBASIC3.1□□□□□ -1.91
VPS4BO75351 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
VPS4BO75351 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
VPS4BO75351 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
VPS4BO75351 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.09□□□□□ -1.91
VPS4BO75351 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.09□□□□□ -1.91
VPS4BO75351 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.09□□□□□ -1.91
VPS4BO75351 AP003122.5-201ENST00000527668 3766 ntBASIC3.09□□□□□ -1.91
VPS4BO75351 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.09□□□□□ -1.91
VPS4BO75351 Y_RNA.153-201ENST00000363615 91 ntBASIC3.09□□□□□ -1.91
VPS4BO75351 Y_RNA.405-201ENST00000383979 100 ntBASIC3.09□□□□□ -1.91
VPS4BO75351 Y_RNA.451-201ENST00000384200 100 ntBASIC3.09□□□□□ -1.91
VPS4BO75351 Y_RNA.524-201ENST00000384564 100 ntBASIC3.09□□□□□ -1.91
VPS4BO75351 Y_RNA.561-201ENST00000384694 100 ntBASIC3.09□□□□□ -1.91
VPS4BO75351 RNU6-19P-201ENST00000384718 107 ntBASIC3.09□□□□□ -1.91
VPS4BO75351 MIR190B-201ENST00000401119 79 ntBASIC3.09□□□□□ -1.91
VPS4BO75351 CYCSP48-201ENST00000417124 323 ntBASIC3.09□□□□□ -1.91
VPS4BO75351 AC004383.1-201ENST00000438135 289 ntBASIC3.09□□□□□ -1.91
VPS4BO75351 AC025750.2-201ENST00000442609 450 ntBASIC3.09□□□□□ -1.91
VPS4BO75351 U8.20-201ENST00000459445 131 ntBASIC3.09□□□□□ -1.91
VPS4BO75351 RN7SL75P-201ENST00000461926 281 ntBASIC3.09□□□□□ -1.91
VPS4BO75351 AC104564.1-201ENST00000493028 407 ntBASIC3.09□□□□□ -1.91
VPS4BO75351 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.09□□□□□ -1.91
VPS4BO75351 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.09□□□□□ -1.91
VPS4BO75351 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.09□□□□□ -1.91
VPS4BO75351 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.09□□□□□ -1.91
VPS4BO75351 RPL12P50-201ENST00000603116 116 ntBASIC3.09□□□□□ -1.91
VPS4BO75351 AC006023.1-201ENST00000603944 259 ntBASIC3.09□□□□□ -1.91
VPS4BO75351 Z98751.3-201ENST00000604447 521 ntBASIC3.09□□□□□ -1.91
VPS4BO75351 AC100812.1-201ENST00000607622 580 ntBASIC3.09□□□□□ -1.91
VPS4BO75351 AL159153.1-201ENST00000619688 317 ntBASIC3.09□□□□□ -1.91
VPS4BO75351 AC243829.7-201ENST00000633081 225 ntBASIC3.09□□□□□ -1.91
VPS4BO75351 AL137790.1-201ENST00000634283 177 ntBASIC3.09□□□□□ -1.91
VPS4BO75351 AP000560.1-201ENST00000624150 1937 ntBASIC3.09□□□□□ -1.92
VPS4BO75351 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
VPS4BO75351 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
VPS4BO75351 Y_RNA.106-201ENST00000363189 100 ntBASIC3.08□□□□□ -1.92
VPS4BO75351 Y_RNA.380-201ENST00000365663 111 ntBASIC3.08□□□□□ -1.92
VPS4BO75351 DYNLT3P1-201ENST00000378574 347 ntBASIC3.08□□□□□ -1.92
VPS4BO75351 RNU6-968P-201ENST00000384076 107 ntBASIC3.08□□□□□ -1.92
VPS4BO75351 SNORA29-201ENST00000384183 140 ntBASIC3.08□□□□□ -1.92
VPS4BO75351 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.08□□□□□ -1.92
VPS4BO75351 Y_RNA.592-201ENST00000410274 109 ntBASIC3.08□□□□□ -1.92
VPS4BO75351 AC092423.1-201ENST00000430165 186 ntBASIC3.08□□□□□ -1.92
VPS4BO75351 MTCO3P29-201ENST00000432119 779 ntBASIC3.08□□□□□ -1.92
VPS4BO75351 Z82188.1-201ENST00000436709 154 ntBASIC3.08□□□□□ -1.92
VPS4BO75351 RPS12P18-201ENST00000442381 270 ntBASIC3.08□□□□□ -1.92
VPS4BO75351 AL031183.1-201ENST00000457667 207 ntBASIC3.08□□□□□ -1.92
VPS4BO75351 snoU13.30-201ENST00000458951 104 ntBASIC3.08□□□□□ -1.92
VPS4BO75351 AC006445.1-201ENST00000491925 405 ntBASIC3.08□□□□□ -1.92
VPS4BO75351 AF186996.7-201ENST00000492781 209 ntBASIC3.08□□□□□ -1.92
VPS4BO75351 RNU7-175P-201ENST00000515915 61 ntBASIC3.08□□□□□ -1.92
VPS4BO75351 RN7SKP43-201ENST00000516173 320 ntBASIC3.08□□□□□ -1.92
VPS4BO75351 AP002404.1-201ENST00000532005 451 ntBASIC3.08□□□□□ -1.92
VPS4BO75351 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
VPS4BO75351 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.08□□□□□ -1.92
VPS4BO75351 RPL23AP78-201ENST00000599928 470 ntBASIC3.08□□□□□ -1.92
VPS4BO75351 AL355877.2-201ENST00000603670 358 ntBASIC3.08□□□□□ -1.92
VPS4BO75351 AC093831.2-201ENST00000624393 3427 ntBASIC3.08□□□□□ -1.92
VPS4BO75351 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
VPS4BO75351 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.07□□□□□ -1.92
VPS4BO75351 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.07□□□□□ -1.92
VPS4BO75351 RNU6-1309P-201ENST00000363305 108 ntBASIC3.07□□□□□ -1.92
VPS4BO75351 Y_RNA.144-201ENST00000363521 113 ntBASIC3.07□□□□□ -1.92
VPS4BO75351 RNY3P11-201ENST00000364153 102 ntBASIC3.07□□□□□ -1.92
VPS4BO75351 SNORA51.4-201ENST00000364993 124 ntBASIC3.07□□□□□ -1.92
VPS4BO75351 RNU6-17P-201ENST00000384245 107 ntBASIC3.07□□□□□ -1.92
VPS4BO75351 RNU6-18P-201ENST00000384527 107 ntBASIC3.07□□□□□ -1.92
VPS4BO75351 SNORA69.1-201ENST00000390904 137 ntBASIC3.07□□□□□ -1.92
VPS4BO75351 RN7SKP58-201ENST00000411010 305 ntBASIC3.07□□□□□ -1.92
VPS4BO75351 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.07□□□□□ -1.92
VPS4BO75351 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.07□□□□□ -1.92
VPS4BO75351 AC244505.4-201ENST00000434905 287 ntBASIC3.07□□□□□ -1.92
VPS4BO75351 SSXP5-201ENST00000443473 287 ntBASIC3.07□□□□□ -1.92
VPS4BO75351 Z75741.1-201ENST00000446793 314 ntBASIC3.07□□□□□ -1.92
VPS4BO75351 RN7SL283P-201ENST00000489055 303 ntBASIC3.07□□□□□ -1.92
VPS4BO75351 AC016632.1-201ENST00000503994 196 ntBASIC3.07□□□□□ -1.92
VPS4BO75351 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.07□□□□□ -1.92
VPS4BO75351 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.07□□□□□ -1.92
VPS4BO75351 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.07□□□□□ -1.92
VPS4BO75351 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.07□□□□□ -1.92
VPS4BO75351 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.07□□□□□ -1.92
VPS4BO75351 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.07□□□□□ -1.92
VPS4BO75351 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.07□□□□□ -1.92
VPS4BO75351 7SK.7-201ENST00000603504 247 ntBASIC3.07□□□□□ -1.92
VPS4BO75351 AL162713.1-201ENST00000604480 262 ntBASIC3.07□□□□□ -1.92
VPS4BO75351 AC093732.2-201ENST00000607950 274 ntBASIC3.07□□□□□ -1.92
VPS4BO75351 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.07□□□□□ -1.92
VPS4BO75351 AL021879.1-201ENST00000611756 288 ntBASIC3.07□□□□□ -1.92
VPS4BO75351 RMST_6.1-201ENST00000611980 203 ntBASIC3.07□□□□□ -1.92
VPS4BO75351 uc_338.25-201ENST00000613756 156 ntBASIC3.07□□□□□ -1.92
VPS4BO75351 MIR6715A-201ENST00000615929 79 ntBASIC3.07□□□□□ -1.92
VPS4BO75351 U2.1-201ENST00000618978 145 ntBASIC3.07□□□□□ -1.92
VPS4BO75351 AC002543.1-201ENST00000299783 1954 ntBASIC3.07□□□□□ -1.92
VPS4BO75351 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
VPS4BO75351 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
VPS4BO75351 AC092268.1-201ENST00000342691 405 ntBASIC3.06□□□□□ -1.92
VPS4BO75351 RNU6-1010P-201ENST00000362757 107 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 178.6 ms