Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 AC138749.5-201ENST00000611461 208 ntBASIC1.35□□□□□ -2.19
NPHP4O75161 AC116165.2-201ENST00000616705 206 ntBASIC1.35□□□□□ -2.19
NPHP4O75161 AC131159.1-201ENST00000621854 213 ntBASIC1.35□□□□□ -2.19
NPHP4O75161 AC007792.1-201ENST00000623023 402 ntBASIC1.35□□□□□ -2.19
NPHP4O75161 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
NPHP4O75161 AC099654.13-201ENST00000639774 207 ntBASIC1.35□□□□□ -2.19
NPHP4O75161 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
NPHP4O75161 AC018630.2-201ENST00000534866 2403 ntBASIC1.35□□□□□ -2.19
NPHP4O75161 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
NPHP4O75161 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.35□□□□□ -2.19
NPHP4O75161 AC091812.1-201ENST00000432235 1948 ntBASIC1.35□□□□□ -2.19
NPHP4O75161 RNU1-58P-201ENST00000362413 163 ntBASIC1.34□□□□□ -2.19
NPHP4O75161 RNU6-78P-201ENST00000362897 107 ntBASIC1.34□□□□□ -2.19
NPHP4O75161 MIR544A-201ENST00000384855 91 ntBASIC1.34□□□□□ -2.19
NPHP4O75161 BTF3L4P1-201ENST00000413813 468 ntBASIC1.34□□□□□ -2.19
NPHP4O75161 MTATP6P16-201ENST00000434543 526 ntBASIC1.34□□□□□ -2.19
NPHP4O75161 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.34□□□□□ -2.19
NPHP4O75161 USP9YP12-201ENST00000450481 570 ntBASIC1.34□□□□□ -2.19
NPHP4O75161 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.34□□□□□ -2.19
NPHP4O75161 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.34□□□□□ -2.19
NPHP4O75161 RNU1-98P-201ENST00000458992 160 ntBASIC1.34□□□□□ -2.19
NPHP4O75161 MTCO2P29-201ENST00000465212 189 ntBASIC1.34□□□□□ -2.19
NPHP4O75161 RPL30P1-201ENST00000488676 339 ntBASIC1.34□□□□□ -2.19
NPHP4O75161 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.34□□□□□ -2.19
NPHP4O75161 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.34□□□□□ -2.19
NPHP4O75161 SCARNA24.1-201ENST00000516465 137 ntBASIC1.34□□□□□ -2.19
NPHP4O75161 RN7SKP256-201ENST00000517201 314 ntBASIC1.34□□□□□ -2.19
NPHP4O75161 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.34□□□□□ -2.19
NPHP4O75161 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.34□□□□□ -2.19
NPHP4O75161 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.34□□□□□ -2.19
NPHP4O75161 MIR4698-201ENST00000577795 80 ntBASIC1.34□□□□□ -2.19
NPHP4O75161 MIR548AB-201ENST00000584917 84 ntBASIC1.34□□□□□ -2.19
NPHP4O75161 AC245884.10-201ENST00000597355 337 ntBASIC1.34□□□□□ -2.19
NPHP4O75161 AC104073.3-201ENST00000610942 955 ntBASIC1.34□□□□□ -2.19
NPHP4O75161 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.34□□□□□ -2.19
NPHP4O75161 RNU6-116P-201ENST00000384042 109 ntBASIC1.33□□□□□ -2.2
NPHP4O75161 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
NPHP4O75161 OR6C66P-201ENST00000414917 930 ntBASIC1.33□□□□□ -2.2
NPHP4O75161 MED13P1-201ENST00000428342 171 ntBASIC1.33□□□□□ -2.2
NPHP4O75161 AC104850.1-201ENST00000435940 476 ntBASIC1.33□□□□□ -2.2
NPHP4O75161 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.33□□□□□ -2.2
NPHP4O75161 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.33□□□□□ -2.2
NPHP4O75161 AC245102.2-201ENST00000448956 180 ntBASIC1.33□□□□□ -2.2
NPHP4O75161 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.33□□□□□ -2.2
NPHP4O75161 RPL31P58-201ENST00000469001 379 ntBASIC1.33□□□□□ -2.2
NPHP4O75161 AC087884.1-201ENST00000469738 328 ntBASIC1.33□□□□□ -2.2
NPHP4O75161 RAP1BP2-201ENST00000478270 544 ntBASIC1.33□□□□□ -2.2
NPHP4O75161 MTCYBP40-201ENST00000509390 1135 ntBASIC1.33□□□□□ -2.2
NPHP4O75161 Y_RNA.672-201ENST00000516289 104 ntBASIC1.33□□□□□ -2.2
NPHP4O75161 RNVU1-2-201ENST00000516326 135 ntBASIC1.33□□□□□ -2.2
NPHP4O75161 SCARNA1-201ENST00000517138 166 ntBASIC1.33□□□□□ -2.2
NPHP4O75161 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.33□□□□□ -2.2
NPHP4O75161 MTND2P32-201ENST00000521584 1038 ntBASIC1.33□□□□□ -2.2
NPHP4O75161 AC009159.2-201ENST00000617603 606 ntBASIC1.33□□□□□ -2.2
NPHP4O75161 RNU6-527P-201ENST00000363425 104 ntBASIC1.32□□□□□ -2.2
NPHP4O75161 SNORA20.2-201ENST00000383922 131 ntBASIC1.32□□□□□ -2.2
NPHP4O75161 RNU6-17P-201ENST00000384245 107 ntBASIC1.32□□□□□ -2.2
NPHP4O75161 RNU6-18P-201ENST00000384527 107 ntBASIC1.32□□□□□ -2.2
NPHP4O75161 Y_RNA.576-201ENST00000384781 102 ntBASIC1.32□□□□□ -2.2
NPHP4O75161 SNORA12-201ENST00000391162 147 ntBASIC1.32□□□□□ -2.2
NPHP4O75161 RPL23AP32-201ENST00000395315 459 ntBASIC1.32□□□□□ -2.2
NPHP4O75161 AC007969.2-201ENST00000441891 191 ntBASIC1.32□□□□□ -2.2
NPHP4O75161 MTND2P4-201ENST00000445034 1004 ntBASIC1.32□□□□□ -2.2
NPHP4O75161 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.32□□□□□ -2.2
NPHP4O75161 DEFB108E-201ENST00000524692 240 ntBASIC1.32□□□□□ -2.2
NPHP4O75161 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.32□□□□□ -2.2
NPHP4O75161 AC022878.1-201ENST00000530684 149 ntBASIC1.32□□□□□ -2.2
NPHP4O75161 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC1.32□□□□□ -2.2
NPHP4O75161 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.32□□□□□ -2.2
NPHP4O75161 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.32□□□□□ -2.2
NPHP4O75161 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
NPHP4O75161 RNA5SP257-201ENST00000363023 116 ntBASIC1.32□□□□□ -2.2
NPHP4O75161 SNORD114-6-201ENST00000364393 72 ntBASIC1.32□□□□□ -2.2
NPHP4O75161 RNU5E-7P-201ENST00000365290 117 ntBASIC1.32□□□□□ -2.2
NPHP4O75161 RNU6-439P-201ENST00000384188 106 ntBASIC1.32□□□□□ -2.2
NPHP4O75161 MIR29B2-201ENST00000385055 81 ntBASIC1.32□□□□□ -2.2
NPHP4O75161 RNU2-3P-201ENST00000410144 191 ntBASIC1.32□□□□□ -2.2
NPHP4O75161 UBE2V1P4-201ENST00000425374 344 ntBASIC1.32□□□□□ -2.2
NPHP4O75161 UBE2D3P4-201ENST00000441973 436 ntBASIC1.32□□□□□ -2.2
NPHP4O75161 SNRPGP7-201ENST00000469016 106 ntBASIC1.32□□□□□ -2.2
NPHP4O75161 RNU2-46P-201ENST00000517038 113 ntBASIC1.32□□□□□ -2.2
NPHP4O75161 AC018630.3-201ENST00000542637 96 ntBASIC1.32□□□□□ -2.2
NPHP4O75161 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.32□□□□□ -2.2
NPHP4O75161 AL353778.1-201ENST00000603149 408 ntBASIC1.32□□□□□ -2.2
NPHP4O75161 AL133173.2-201ENST00000614270 90 ntBASIC1.32□□□□□ -2.2
NPHP4O75161 AC022960.3-201ENST00000619794 441 ntBASIC1.32□□□□□ -2.2
NPHP4O75161 RNU6-179P-201ENST00000363350 107 ntBASIC1.31□□□□□ -2.2
NPHP4O75161 RNU4-28P-201ENST00000364739 141 ntBASIC1.31□□□□□ -2.2
NPHP4O75161 RNU6-169P-201ENST00000365336 107 ntBASIC1.31□□□□□ -2.2
NPHP4O75161 Y_RNA.433-201ENST00000384089 102 ntBASIC1.31□□□□□ -2.2
NPHP4O75161 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
NPHP4O75161 RNU6-195P-201ENST00000411352 109 ntBASIC1.31□□□□□ -2.2
NPHP4O75161 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.31□□□□□ -2.2
NPHP4O75161 AC004941.2-201ENST00000427009 228 ntBASIC1.31□□□□□ -2.2
NPHP4O75161 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.31□□□□□ -2.2
NPHP4O75161 AC006026.2-201ENST00000457376 180 ntBASIC1.31□□□□□ -2.2
NPHP4O75161 AC021146.2-201ENST00000504736 556 ntBASIC1.31□□□□□ -2.2
NPHP4O75161 AC116562.3-201ENST00000506136 177 ntBASIC1.31□□□□□ -2.2
NPHP4O75161 MTND2P33-201ENST00000506452 1031 ntBASIC1.31□□□□□ -2.2
NPHP4O75161 AC104806.1-201ENST00000508720 308 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms