Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
BRD4O60885 AL139286.2-201ENST00000606838 396 ntBASIC1.27□□□□□ -2.21
BRD4O60885 AC131159.1-201ENST00000621854 213 ntBASIC1.27□□□□□ -2.21
BRD4O60885 HAUS6P2-201ENST00000433254 2404 ntBASIC1.27□□□□□ -2.21
BRD4O60885 RNU6-641P-201ENST00000384006 107 ntBASIC1.26□□□□□ -2.21
BRD4O60885 RNU5A-2P-201ENST00000384337 116 ntBASIC1.26□□□□□ -2.21
BRD4O60885 RNA5SP111-201ENST00000411386 101 ntBASIC1.26□□□□□ -2.21
BRD4O60885 AC007283.2-201ENST00000424739 197 ntBASIC1.26□□□□□ -2.21
BRD4O60885 AC004941.2-201ENST00000427009 228 ntBASIC1.26□□□□□ -2.21
BRD4O60885 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.26□□□□□ -2.21
BRD4O60885 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.26□□□□□ -2.21
BRD4O60885 MTCO1P44-201ENST00000441935 243 ntBASIC1.26□□□□□ -2.21
BRD4O60885 snoU109.2-201ENST00000459316 135 ntBASIC1.26□□□□□ -2.21
BRD4O60885 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.26□□□□□ -2.21
BRD4O60885 RPL30P6-201ENST00000475925 342 ntBASIC1.26□□□□□ -2.21
BRD4O60885 Y_RNA.672-201ENST00000516289 104 ntBASIC1.26□□□□□ -2.21
BRD4O60885 RNA5SP476-201ENST00000516613 103 ntBASIC1.26□□□□□ -2.21
BRD4O60885 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.26□□□□□ -2.21
BRD4O60885 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.26□□□□□ -2.21
BRD4O60885 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.26□□□□□ -2.21
BRD4O60885 ZNF321P-202ENST00000550843 495 ntBASIC1.26□□□□□ -2.21
BRD4O60885 AC136619.2-201ENST00000563361 631 ntBASIC1.26□□□□□ -2.21
BRD4O60885 MIR1273G-201ENST00000577677 100 ntBASIC1.26□□□□□ -2.21
BRD4O60885 MIR4714-201ENST00000580728 77 ntBASIC1.26□□□□□ -2.21
BRD4O60885 HMGN1P30-201ENST00000589286 268 ntBASIC1.26□□□□□ -2.21
BRD4O60885 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.26□□□□□ -2.21
BRD4O60885 AL022154.1-201ENST00000604698 785 ntBASIC1.26□□□□□ -2.21
BRD4O60885 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.26□□□□□ -2.21
BRD4O60885 AC004223.4-201ENST00000612426 332 ntBASIC1.26□□□□□ -2.21
BRD4O60885 AC122133.1-201ENST00000613964 233 ntBASIC1.26□□□□□ -2.21
BRD4O60885 AL132822.1-201ENST00000617063 513 ntBASIC1.26□□□□□ -2.21
BRD4O60885 MIR3529-201ENST00000637713 78 ntBASIC1.26□□□□□ -2.21
BRD4O60885 SNORD33-201ENST00000362761 85 ntBASIC1.25□□□□□ -2.21
BRD4O60885 RNU4-1-201ENST00000363925 141 ntBASIC1.25□□□□□ -2.21
BRD4O60885 RNU6-546P-201ENST00000383991 107 ntBASIC1.25□□□□□ -2.21
BRD4O60885 RNU6-39P-201ENST00000384344 107 ntBASIC1.25□□□□□ -2.21
BRD4O60885 MIR558-201ENST00000384920 94 ntBASIC1.25□□□□□ -2.21
BRD4O60885 RPL23AP32-201ENST00000395315 459 ntBASIC1.25□□□□□ -2.21
BRD4O60885 RNA5SP100-201ENST00000410903 110 ntBASIC1.25□□□□□ -2.21
BRD4O60885 RNA5SP59-201ENST00000410922 110 ntBASIC1.25□□□□□ -2.21
BRD4O60885 AC016831.2-201ENST00000417179 352 ntBASIC1.25□□□□□ -2.21
BRD4O60885 AC008267.5-201ENST00000424928 265 ntBASIC1.25□□□□□ -2.21
BRD4O60885 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC1.25□□□□□ -2.21
BRD4O60885 USP9YP18-201ENST00000425912 695 ntBASIC1.25□□□□□ -2.21
BRD4O60885 RPS24P1-201ENST00000438550 371 ntBASIC1.25□□□□□ -2.21
BRD4O60885 EPS15P1-201ENST00000448836 336 ntBASIC1.25□□□□□ -2.21
BRD4O60885 RNU7-125P-201ENST00000458760 62 ntBASIC1.25□□□□□ -2.21
BRD4O60885 AC005908.1-201ENST00000468701 347 ntBASIC1.25□□□□□ -2.21
BRD4O60885 RNU6-1129P-201ENST00000515964 104 ntBASIC1.25□□□□□ -2.21
BRD4O60885 RN7SKP287-201ENST00000516546 266 ntBASIC1.25□□□□□ -2.21
BRD4O60885 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.25□□□□□ -2.21
BRD4O60885 AC009094.1-201ENST00000564443 426 ntBASIC1.25□□□□□ -2.21
BRD4O60885 AC025678.1-201ENST00000567861 338 ntBASIC1.25□□□□□ -2.21
BRD4O60885 CLIC4P2-201ENST00000601934 717 ntBASIC1.25□□□□□ -2.21
BRD4O60885 AL590095.2-201ENST00000604136 117 ntBASIC1.25□□□□□ -2.21
BRD4O60885 AC093424.1-201ENST00000604999 338 ntBASIC1.25□□□□□ -2.21
BRD4O60885 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.25□□□□□ -2.21
BRD4O60885 AL133173.2-201ENST00000614270 90 ntBASIC1.25□□□□□ -2.21
BRD4O60885 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.25□□□□□ -2.21
BRD4O60885 MTND4P4-201ENST00000439033 1366 ntBASIC1.25□□□□□ -2.21
BRD4O60885 SNORA20.2-201ENST00000383922 131 ntBASIC1.24□□□□□ -2.21
BRD4O60885 RNU6-1179P-201ENST00000384667 107 ntBASIC1.24□□□□□ -2.21
BRD4O60885 SNORA48.1-201ENST00000390879 135 ntBASIC1.24□□□□□ -2.21
BRD4O60885 AL031577.2-201ENST00000404133 280 ntBASIC1.24□□□□□ -2.21
BRD4O60885 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC1.24□□□□□ -2.21
BRD4O60885 MED13P1-201ENST00000428342 171 ntBASIC1.24□□□□□ -2.21
BRD4O60885 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.24□□□□□ -2.21
BRD4O60885 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.24□□□□□ -2.21
BRD4O60885 NDUFB1P2-201ENST00000449477 176 ntBASIC1.24□□□□□ -2.21
BRD4O60885 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
BRD4O60885 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.24□□□□□ -2.21
BRD4O60885 RPL30P7-201ENST00000479312 323 ntBASIC1.24□□□□□ -2.21
BRD4O60885 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.24□□□□□ -2.21
BRD4O60885 AC005178.1-201ENST00000508392 440 ntBASIC1.24□□□□□ -2.21
BRD4O60885 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.24□□□□□ -2.21
BRD4O60885 RNU6-123P-201ENST00000516163 102 ntBASIC1.24□□□□□ -2.21
BRD4O60885 AC109329.1-201ENST00000518744 317 ntBASIC1.24□□□□□ -2.21
BRD4O60885 AC019288.1-201ENST00000557918 224 ntBASIC1.24□□□□□ -2.21
BRD4O60885 MIR548AC-201ENST00000585049 88 ntBASIC1.24□□□□□ -2.21
BRD4O60885 AC005771.1-201ENST00000585581 349 ntBASIC1.24□□□□□ -2.21
BRD4O60885 DEFB131E-202ENST00000602581 683 ntBASIC1.24□□□□□ -2.21
BRD4O60885 HSPE1P19-201ENST00000603327 295 ntBASIC1.24□□□□□ -2.21
BRD4O60885 AL138889.2-201ENST00000603883 242 ntBASIC1.24□□□□□ -2.21
BRD4O60885 AC098614.4-201ENST00000607601 462 ntBASIC1.24□□□□□ -2.21
BRD4O60885 AC012409.4-201ENST00000612923 249 ntBASIC1.24□□□□□ -2.21
BRD4O60885 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.24□□□□□ -2.21
BRD4O60885 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
BRD4O60885 SNORA24.1-201ENST00000384401 135 ntBASIC1.23□□□□□ -2.21
BRD4O60885 RNU6-843P-201ENST00000384454 104 ntBASIC1.23□□□□□ -2.21
BRD4O60885 MIR10A-201ENST00000385043 110 ntBASIC1.23□□□□□ -2.21
BRD4O60885 RPS3AP36-201ENST00000398190 775 ntBASIC1.23□□□□□ -2.21
BRD4O60885 UBE2V1P10-201ENST00000414685 269 ntBASIC1.23□□□□□ -2.21
BRD4O60885 MTND2P9-201ENST00000422293 931 ntBASIC1.23□□□□□ -2.21
BRD4O60885 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.23□□□□□ -2.21
BRD4O60885 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC1.23□□□□□ -2.21
BRD4O60885 ZNF736P8Y-201ENST00000451913 669 ntBASIC1.23□□□□□ -2.21
BRD4O60885 AC006026.2-201ENST00000457376 180 ntBASIC1.23□□□□□ -2.21
BRD4O60885 MED28P2-201ENST00000475771 317 ntBASIC1.23□□□□□ -2.21
BRD4O60885 HMGB1P30-201ENST00000492455 606 ntBASIC1.23□□□□□ -2.21
BRD4O60885 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms