Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 CYCSP30-201ENST00000546447 172 ntBASIC3.56□□□□□ -1.84
TRIM13O60858 MIR5695-201ENST00000579717 85 ntBASIC3.56□□□□□ -1.84
TRIM13O60858 MIR6716-201ENST00000613413 80 ntBASIC3.56□□□□□ -1.84
TRIM13O60858 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.56□□□□□ -1.84
TRIM13O60858 MIR7641-1-201ENST00000627518 61 ntBASIC3.56□□□□□ -1.84
TRIM13O60858 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM13O60858 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.56□□□□□ -1.84
TRIM13O60858 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
TRIM13O60858 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
TRIM13O60858 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
TRIM13O60858 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
TRIM13O60858 AL353743.1-202ENST00000431724 1695 ntBASIC3.55□□□□□ -1.84
TRIM13O60858 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
TRIM13O60858 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.55□□□□□ -1.84
TRIM13O60858 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TRIM13O60858 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TRIM13O60858 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TRIM13O60858 RNU4-11P-201ENST00000365287 132 ntBASIC3.55□□□□□ -1.84
TRIM13O60858 SNORA62-201ENST00000365493 153 ntBASIC3.55□□□□□ -1.84
TRIM13O60858 RNU6-1056P-201ENST00000383996 107 ntBASIC3.55□□□□□ -1.84
TRIM13O60858 SNORA70C-201ENST00000384538 135 ntBASIC3.55□□□□□ -1.84
TRIM13O60858 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.55□□□□□ -1.84
TRIM13O60858 UBE2CP3-201ENST00000502715 450 ntBASIC3.55□□□□□ -1.84
TRIM13O60858 DEFB131C-201ENST00000528817 165 ntBASIC3.55□□□□□ -1.84
TRIM13O60858 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.55□□□□□ -1.84
TRIM13O60858 AC090616.3-201ENST00000582184 217 ntBASIC3.55□□□□□ -1.84
TRIM13O60858 AC068831.7-201ENST00000616954 363 ntBASIC3.55□□□□□ -1.84
TRIM13O60858 AC022149.2-201ENST00000621061 203 ntBASIC3.55□□□□□ -1.84
TRIM13O60858 AC058791.1-201ENST00000608412 3198 ntBASIC3.55□□□□□ -1.84
TRIM13O60858 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
TRIM13O60858 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TRIM13O60858 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
TRIM13O60858 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TRIM13O60858 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.54□□□□□ -1.84
TRIM13O60858 AC092593.1-201ENST00000515413 1815 ntBASIC3.54□□□□□ -1.84
TRIM13O60858 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.54□□□□□ -1.84
TRIM13O60858 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
TRIM13O60858 Y_RNA.319-201ENST00000365138 92 ntBASIC3.54□□□□□ -1.84
TRIM13O60858 SNORA20-201ENST00000384662 132 ntBASIC3.54□□□□□ -1.84
TRIM13O60858 RNU6-541P-201ENST00000384709 110 ntBASIC3.54□□□□□ -1.84
TRIM13O60858 MIR585-201ENST00000384887 94 ntBASIC3.54□□□□□ -1.84
TRIM13O60858 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
TRIM13O60858 PPIAP31-201ENST00000405422 495 ntBASIC3.54□□□□□ -1.84
TRIM13O60858 RNA5SP317-201ENST00000410176 116 ntBASIC3.54□□□□□ -1.84
TRIM13O60858 RNA5SP129-201ENST00000410276 118 ntBASIC3.54□□□□□ -1.84
TRIM13O60858 RNA5SP311-201ENST00000411290 116 ntBASIC3.54□□□□□ -1.84
TRIM13O60858 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.54□□□□□ -1.84
TRIM13O60858 EIF1AXP1-201ENST00000419267 435 ntBASIC3.54□□□□□ -1.84
TRIM13O60858 RPL17P36-201ENST00000420302 549 ntBASIC3.54□□□□□ -1.84
TRIM13O60858 BTF3P11-201ENST00000426582 477 ntBASIC3.54□□□□□ -1.84
TRIM13O60858 AL591419.1-201ENST00000427423 339 ntBASIC3.54□□□□□ -1.84
TRIM13O60858 Z82210.1-201ENST00000440037 231 ntBASIC3.54□□□□□ -1.84
TRIM13O60858 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.54□□□□□ -1.84
TRIM13O60858 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.54□□□□□ -1.84
TRIM13O60858 AC016925.1-201ENST00000458303 298 ntBASIC3.54□□□□□ -1.84
TRIM13O60858 RNU6-1211P-201ENST00000459179 105 ntBASIC3.54□□□□□ -1.84
TRIM13O60858 RNA5SP315-201ENST00000516340 116 ntBASIC3.54□□□□□ -1.84
TRIM13O60858 RNA5SP312-201ENST00000517068 116 ntBASIC3.54□□□□□ -1.84
TRIM13O60858 NDUFB9P3-201ENST00000521269 501 ntBASIC3.54□□□□□ -1.84
TRIM13O60858 CYCSP26-201ENST00000534107 320 ntBASIC3.54□□□□□ -1.84
TRIM13O60858 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.54□□□□□ -1.84
TRIM13O60858 UBL5P4-201ENST00000562584 236 ntBASIC3.54□□□□□ -1.84
TRIM13O60858 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.54□□□□□ -1.84
TRIM13O60858 MIR3690-201ENST00000580266 75 ntBASIC3.54□□□□□ -1.84
TRIM13O60858 RNU1-30P-201ENST00000606575 163 ntBASIC3.54□□□□□ -1.84
TRIM13O60858 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TRIM13O60858 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.54□□□□□ -1.84
TRIM13O60858 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.54□□□□□ -1.84
TRIM13O60858 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TRIM13O60858 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
TRIM13O60858 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
TRIM13O60858 AL391516.1-201ENST00000554380 2449 ntBASIC3.53□□□□□ -1.84
TRIM13O60858 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
TRIM13O60858 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
TRIM13O60858 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
TRIM13O60858 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.53□□□□□ -1.84
TRIM13O60858 FTLP6-201ENST00000355274 422 ntBASIC3.53□□□□□ -1.84
TRIM13O60858 MIR30E-201ENST00000362104 92 ntBASIC3.53□□□□□ -1.84
TRIM13O60858 RNU6-898P-201ENST00000365627 104 ntBASIC3.53□□□□□ -1.84
TRIM13O60858 U8.10-201ENST00000384260 133 ntBASIC3.53□□□□□ -1.84
TRIM13O60858 RNU6-159P-201ENST00000391080 106 ntBASIC3.53□□□□□ -1.84
TRIM13O60858 RNY4P18-201ENST00000391107 89 ntBASIC3.53□□□□□ -1.84
TRIM13O60858 RNU6-1197P-201ENST00000391183 107 ntBASIC3.53□□□□□ -1.84
TRIM13O60858 MIR937-201ENST00000401271 86 ntBASIC3.53□□□□□ -1.84
TRIM13O60858 MIR513C-201ENST00000401352 84 ntBASIC3.53□□□□□ -1.84
TRIM13O60858 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.53□□□□□ -1.84
TRIM13O60858 EBAG9P1-201ENST00000418955 543 ntBASIC3.53□□□□□ -1.84
TRIM13O60858 AC007560.1-201ENST00000426912 237 ntBASIC3.53□□□□□ -1.84
TRIM13O60858 RPS15AP5-201ENST00000436276 388 ntBASIC3.53□□□□□ -1.84
TRIM13O60858 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.53□□□□□ -1.84
TRIM13O60858 AC124916.1-201ENST00000444020 547 ntBASIC3.53□□□□□ -1.84
TRIM13O60858 AC074290.1-201ENST00000448883 135 ntBASIC3.53□□□□□ -1.84
TRIM13O60858 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.53□□□□□ -1.84
TRIM13O60858 AC092798.1-201ENST00000458542 409 ntBASIC3.53□□□□□ -1.84
TRIM13O60858 RNU6-966P-201ENST00000516479 104 ntBASIC3.53□□□□□ -1.84
TRIM13O60858 AC026333.2-201ENST00000542164 106 ntBASIC3.53□□□□□ -1.84
TRIM13O60858 AC011602.1-201ENST00000546484 331 ntBASIC3.53□□□□□ -1.84
TRIM13O60858 MIR5047-201ENST00000579212 100 ntBASIC3.53□□□□□ -1.84
TRIM13O60858 MIR3145-201ENST00000580727 82 ntBASIC3.53□□□□□ -1.84
TRIM13O60858 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms