Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.48□□□□□ -2.01
LMX1BO60663 AL031659.1-201ENST00000447075 539 ntBASIC2.48□□□□□ -2.01
LMX1BO60663 RNA5SP310-201ENST00000459084 116 ntBASIC2.48□□□□□ -2.01
LMX1BO60663 U8.21-201ENST00000459536 136 ntBASIC2.48□□□□□ -2.01
LMX1BO60663 AC003982.1-202ENST00000469928 248 ntBASIC2.48□□□□□ -2.01
LMX1BO60663 RPS26P21-201ENST00000475397 348 ntBASIC2.48□□□□□ -2.01
LMX1BO60663 RPL22P13-201ENST00000493291 347 ntBASIC2.48□□□□□ -2.01
LMX1BO60663 AC015911.1-201ENST00000495111 156 ntBASIC2.48□□□□□ -2.01
LMX1BO60663 SNORA31.18-201ENST00000517043 134 ntBASIC2.48□□□□□ -2.01
LMX1BO60663 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.48□□□□□ -2.01
LMX1BO60663 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.48□□□□□ -2.01
LMX1BO60663 MIR4319-201ENST00000577285 85 ntBASIC2.48□□□□□ -2.01
LMX1BO60663 VN1R107P-201ENST00000601784 209 ntBASIC2.48□□□□□ -2.01
LMX1BO60663 AC090115.4-201ENST00000609970 188 ntBASIC2.48□□□□□ -2.01
LMX1BO60663 MIR1244-1-201ENST00000612829 85 ntBASIC2.48□□□□□ -2.01
LMX1BO60663 SCARNA4-202ENST00000625402 129 ntBASIC2.48□□□□□ -2.01
LMX1BO60663 MIR1244-3-201ENST00000635744 85 ntBASIC2.48□□□□□ -2.01
LMX1BO60663 MIR1244-2-201ENST00000636449 85 ntBASIC2.48□□□□□ -2.01
LMX1BO60663 MIR1244-4-202ENST00000636813 85 ntBASIC2.48□□□□□ -2.01
LMX1BO60663 MTND5P7-201ENST00000413558 1798 ntBASIC2.48□□□□□ -2.01
LMX1BO60663 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.48□□□□□ -2.01
LMX1BO60663 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
LMX1BO60663 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.47□□□□□ -2.01
LMX1BO60663 AC092593.1-201ENST00000515413 1815 ntBASIC2.47□□□□□ -2.01
LMX1BO60663 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.47□□□□□ -2.01
LMX1BO60663 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
LMX1BO60663 Y_RNA.39-201ENST00000362620 98 ntBASIC2.47□□□□□ -2.01
LMX1BO60663 RNU6-227P-201ENST00000362865 103 ntBASIC2.47□□□□□ -2.01
LMX1BO60663 Y_RNA.389-201ENST00000383924 113 ntBASIC2.47□□□□□ -2.01
LMX1BO60663 Y_RNA.452-201ENST00000384202 108 ntBASIC2.47□□□□□ -2.01
LMX1BO60663 AL591034.1-201ENST00000407447 340 ntBASIC2.47□□□□□ -2.01
LMX1BO60663 RNA5SP494-201ENST00000410653 129 ntBASIC2.47□□□□□ -2.01
LMX1BO60663 RN7SKP123-201ENST00000410732 291 ntBASIC2.47□□□□□ -2.01
LMX1BO60663 BPY2DP-201ENST00000422208 265 ntBASIC2.47□□□□□ -2.01
LMX1BO60663 MTCYBP10-201ENST00000424905 650 ntBASIC2.47□□□□□ -2.01
LMX1BO60663 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.47□□□□□ -2.01
LMX1BO60663 RPL21P2-201ENST00000440049 481 ntBASIC2.47□□□□□ -2.01
LMX1BO60663 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.47□□□□□ -2.01
LMX1BO60663 AC243964.1-201ENST00000441814 261 ntBASIC2.47□□□□□ -2.01
LMX1BO60663 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.47□□□□□ -2.01
LMX1BO60663 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.47□□□□□ -2.01
LMX1BO60663 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.47□□□□□ -2.01
LMX1BO60663 AC006445.2-201ENST00000510061 472 ntBASIC2.47□□□□□ -2.01
LMX1BO60663 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.47□□□□□ -2.01
LMX1BO60663 SNORA40.14-201ENST00000516543 86 ntBASIC2.47□□□□□ -2.01
LMX1BO60663 SNORA31.26-201ENST00000517250 137 ntBASIC2.47□□□□□ -2.01
LMX1BO60663 RNU6-711P-201ENST00000517255 106 ntBASIC2.47□□□□□ -2.01
LMX1BO60663 AL391261.3-201ENST00000557194 520 ntBASIC2.47□□□□□ -2.01
LMX1BO60663 MIR3945-201ENST00000581853 98 ntBASIC2.47□□□□□ -2.01
LMX1BO60663 AC060766.3-201ENST00000591442 263 ntBASIC2.47□□□□□ -2.01
LMX1BO60663 MTND4LP5-201ENST00000605152 292 ntBASIC2.47□□□□□ -2.01
LMX1BO60663 AC097372.5-201ENST00000623665 376 ntBASIC2.47□□□□□ -2.01
LMX1BO60663 AC241585.2-209ENST00000638217 143 ntBASIC2.47□□□□□ -2.01
LMX1BO60663 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.47□□□□□ -2.01
LMX1BO60663 AC080100.1-201ENST00000624239 5356 ntBASIC2.47□□□□□ -2.01
LMX1BO60663 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
LMX1BO60663 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.46□□□□□ -2.01
LMX1BO60663 SNORA9.2-201ENST00000365361 133 ntBASIC2.46□□□□□ -2.02
LMX1BO60663 RNU6-505P-201ENST00000384427 107 ntBASIC2.46□□□□□ -2.02
LMX1BO60663 RNU6-1109P-201ENST00000391187 107 ntBASIC2.46□□□□□ -2.02
LMX1BO60663 RNU6-101P-201ENST00000410323 104 ntBASIC2.46□□□□□ -2.02
LMX1BO60663 AP000275.1-201ENST00000411943 390 ntBASIC2.46□□□□□ -2.02
LMX1BO60663 NDUFS5P4-201ENST00000412983 318 ntBASIC2.46□□□□□ -2.02
LMX1BO60663 HMGN2P30-201ENST00000423237 256 ntBASIC2.46□□□□□ -2.02
LMX1BO60663 OOSP1P1-201ENST00000423265 274 ntBASIC2.46□□□□□ -2.02
LMX1BO60663 TOMM20P4-201ENST00000427861 435 ntBASIC2.46□□□□□ -2.02
LMX1BO60663 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.46□□□□□ -2.02
LMX1BO60663 AC103975.1-201ENST00000482506 483 ntBASIC2.46□□□□□ -2.02
LMX1BO60663 RPL30P10-201ENST00000488148 337 ntBASIC2.46□□□□□ -2.02
LMX1BO60663 Y_RNA.721-201ENST00000517207 102 ntBASIC2.46□□□□□ -2.02
LMX1BO60663 AP004607.1-201ENST00000524456 203 ntBASIC2.46□□□□□ -2.02
LMX1BO60663 MIR3149-201ENST00000584629 83 ntBASIC2.46□□□□□ -2.02
LMX1BO60663 AC020895.1-201ENST00000595362 272 ntBASIC2.46□□□□□ -2.02
LMX1BO60663 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.46□□□□□ -2.02
LMX1BO60663 PRR13P7-201ENST00000605538 430 ntBASIC2.46□□□□□ -2.02
LMX1BO60663 AL021879.1-201ENST00000611756 288 ntBASIC2.46□□□□□ -2.02
LMX1BO60663 MIR6715A-201ENST00000615929 79 ntBASIC2.46□□□□□ -2.02
LMX1BO60663 FAM35BP-202ENST00000497389 3337 ntBASIC2.46□□□□□ -2.02
LMX1BO60663 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
LMX1BO60663 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
LMX1BO60663 AP000560.1-201ENST00000624150 1937 ntBASIC2.45□□□□□ -2.02
LMX1BO60663 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.45□□□□□ -2.02
LMX1BO60663 Y_RNA.512-201ENST00000384518 102 ntBASIC2.45□□□□□ -2.02
LMX1BO60663 Y_RNA.574-201ENST00000384766 95 ntBASIC2.45□□□□□ -2.02
LMX1BO60663 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
LMX1BO60663 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
LMX1BO60663 RPL21P1-201ENST00000399532 476 ntBASIC2.45□□□□□ -2.02
LMX1BO60663 FTH1P15-201ENST00000406984 280 ntBASIC2.45□□□□□ -2.02
LMX1BO60663 MIR1252-201ENST00000408861 65 ntBASIC2.45□□□□□ -2.02
LMX1BO60663 AC023141.4-201ENST00000412031 328 ntBASIC2.45□□□□□ -2.02
LMX1BO60663 AC063976.3-201ENST00000426849 329 ntBASIC2.45□□□□□ -2.02
LMX1BO60663 AC087499.2-201ENST00000432861 149 ntBASIC2.45□□□□□ -2.02
LMX1BO60663 AL714022.1-201ENST00000439897 151 ntBASIC2.45□□□□□ -2.02
LMX1BO60663 AC007969.2-201ENST00000441891 191 ntBASIC2.45□□□□□ -2.02
LMX1BO60663 HMGN2P10-201ENST00000448085 265 ntBASIC2.45□□□□□ -2.02
LMX1BO60663 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.45□□□□□ -2.02
LMX1BO60663 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.45□□□□□ -2.02
LMX1BO60663 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.45□□□□□ -2.02
LMX1BO60663 AC091874.1-201ENST00000511402 339 ntBASIC2.45□□□□□ -2.02
LMX1BO60663 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms