Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.7□□□□□ -1.98
TSPAN3O60637 AL353752.1-201ENST00000454946 260 ntBASIC2.7□□□□□ -1.98
TSPAN3O60637 TRBV12-1-201ENST00000479785 344 ntBASIC2.7□□□□□ -1.98
TSPAN3O60637 SRIP1-201ENST00000489235 288 ntBASIC2.7□□□□□ -1.98
TSPAN3O60637 AC016632.1-201ENST00000503994 196 ntBASIC2.7□□□□□ -1.98
TSPAN3O60637 RNA5SP148-201ENST00000516527 94 ntBASIC2.7□□□□□ -1.98
TSPAN3O60637 SNORA31.16-201ENST00000516773 139 ntBASIC2.7□□□□□ -1.98
TSPAN3O60637 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.7□□□□□ -1.98
TSPAN3O60637 AC091544.4-201ENST00000555268 342 ntBASIC2.7□□□□□ -1.98
TSPAN3O60637 AC018889.1-201ENST00000605372 397 ntBASIC2.7□□□□□ -1.98
TSPAN3O60637 MIR8076-201ENST00000611401 83 ntBASIC2.7□□□□□ -1.98
TSPAN3O60637 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
TSPAN3O60637 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
TSPAN3O60637 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
TSPAN3O60637 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
TSPAN3O60637 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.69□□□□□ -1.98
TSPAN3O60637 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
TSPAN3O60637 RNA5SP432-201ENST00000362480 116 ntBASIC2.69□□□□□ -1.98
TSPAN3O60637 SNORA36A-201ENST00000384221 132 ntBASIC2.69□□□□□ -1.98
TSPAN3O60637 CBX3P9-201ENST00000402326 552 ntBASIC2.69□□□□□ -1.98
TSPAN3O60637 RN7SKP61-201ENST00000410642 295 ntBASIC2.69□□□□□ -1.98
TSPAN3O60637 AC007064.1-201ENST00000412238 351 ntBASIC2.69□□□□□ -1.98
TSPAN3O60637 AC074085.1-201ENST00000413598 418 ntBASIC2.69□□□□□ -1.98
TSPAN3O60637 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC2.69□□□□□ -1.98
TSPAN3O60637 RPL23AP95-201ENST00000426806 265 ntBASIC2.69□□□□□ -1.98
TSPAN3O60637 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.69□□□□□ -1.98
TSPAN3O60637 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.69□□□□□ -1.98
TSPAN3O60637 MTND4P17-201ENST00000470444 350 ntBASIC2.69□□□□□ -1.98
TSPAN3O60637 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.69□□□□□ -1.98
TSPAN3O60637 AC104564.1-201ENST00000493028 407 ntBASIC2.69□□□□□ -1.98
TSPAN3O60637 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.69□□□□□ -1.98
TSPAN3O60637 RNU1-104P-201ENST00000517280 175 ntBASIC2.69□□□□□ -1.98
TSPAN3O60637 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.69□□□□□ -1.98
TSPAN3O60637 CBX3P7-201ENST00000532876 502 ntBASIC2.69□□□□□ -1.98
TSPAN3O60637 UBE2V2P2-201ENST00000587677 504 ntBASIC2.69□□□□□ -1.98
TSPAN3O60637 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.69□□□□□ -1.98
TSPAN3O60637 AL356157.2-201ENST00000605122 111 ntBASIC2.69□□□□□ -1.98
TSPAN3O60637 TPTEP1-208ENST00000636884 213 ntBASIC2.69□□□□□ -1.98
TSPAN3O60637 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.69□□□□□ -1.98
TSPAN3O60637 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
TSPAN3O60637 Y_RNA.166-201ENST00000363730 102 ntBASIC2.68□□□□□ -1.98
TSPAN3O60637 RNA5SP210-201ENST00000391034 120 ntBASIC2.68□□□□□ -1.98
TSPAN3O60637 AL356432.1-201ENST00000405809 419 ntBASIC2.68□□□□□ -1.98
TSPAN3O60637 MIR548K-201ENST00000408406 116 ntBASIC2.68□□□□□ -1.98
TSPAN3O60637 RNU2-63P-201ENST00000410792 194 ntBASIC2.68□□□□□ -1.98
TSPAN3O60637 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.68□□□□□ -1.98
TSPAN3O60637 AL133396.1-201ENST00000432048 687 ntBASIC2.68□□□□□ -1.98
TSPAN3O60637 AL121890.1-201ENST00000435457 205 ntBASIC2.68□□□□□ -1.98
TSPAN3O60637 AL139109.1-201ENST00000455491 297 ntBASIC2.68□□□□□ -1.98
TSPAN3O60637 HMGB1P35-201ENST00000503360 598 ntBASIC2.68□□□□□ -1.98
TSPAN3O60637 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.68□□□□□ -1.98
TSPAN3O60637 ACA59.1-201ENST00000515966 143 ntBASIC2.68□□□□□ -1.98
TSPAN3O60637 RNU6-586P-201ENST00000517265 104 ntBASIC2.68□□□□□ -1.98
TSPAN3O60637 AL355297.2-201ENST00000604792 129 ntBASIC2.68□□□□□ -1.98
TSPAN3O60637 AL034555.1-201ENST00000604816 211 ntBASIC2.68□□□□□ -1.98
TSPAN3O60637 AC107871.2-201ENST00000612894 502 ntBASIC2.68□□□□□ -1.98
TSPAN3O60637 AC063943.3-201ENST00000615562 356 ntBASIC2.68□□□□□ -1.98
TSPAN3O60637 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.68□□□□□ -1.98
TSPAN3O60637 AC092268.1-201ENST00000342691 405 ntBASIC2.67□□□□□ -1.98
TSPAN3O60637 RNU6-1059P-201ENST00000363752 98 ntBASIC2.67□□□□□ -1.98
TSPAN3O60637 SNORA67.1-201ENST00000364749 141 ntBASIC2.67□□□□□ -1.98
TSPAN3O60637 XGY1-201ENST00000381172 446 ntBASIC2.67□□□□□ -1.98
TSPAN3O60637 Y_RNA.473-201ENST00000384333 102 ntBASIC2.67□□□□□ -1.98
TSPAN3O60637 SNORA67.4-201ENST00000384688 142 ntBASIC2.67□□□□□ -1.98
TSPAN3O60637 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.67□□□□□ -1.98
TSPAN3O60637 RPL37P10-201ENST00000412884 288 ntBASIC2.67□□□□□ -1.98
TSPAN3O60637 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.67□□□□□ -1.98
TSPAN3O60637 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.67□□□□□ -1.98
TSPAN3O60637 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.67□□□□□ -1.98
TSPAN3O60637 AC078809.1-201ENST00000427601 140 ntBASIC2.67□□□□□ -1.98
TSPAN3O60637 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.67□□□□□ -1.98
TSPAN3O60637 DAP3P1-201ENST00000441522 278 ntBASIC2.67□□□□□ -1.98
TSPAN3O60637 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
TSPAN3O60637 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.67□□□□□ -1.98
TSPAN3O60637 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.67□□□□□ -1.98
TSPAN3O60637 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.67□□□□□ -1.98
TSPAN3O60637 RNU6-507P-201ENST00000516045 100 ntBASIC2.67□□□□□ -1.98
TSPAN3O60637 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.67□□□□□ -1.98
TSPAN3O60637 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.67□□□□□ -1.98
TSPAN3O60637 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
TSPAN3O60637 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.67□□□□□ -1.98
TSPAN3O60637 AC078795.3-201ENST00000602913 472 ntBASIC2.67□□□□□ -1.98
TSPAN3O60637 SNORA43.4-201ENST00000629559 138 ntBASIC2.67□□□□□ -1.98
TSPAN3O60637 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.67□□□□□ -1.98
TSPAN3O60637 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
TSPAN3O60637 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.66□□□□□ -1.98
TSPAN3O60637 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
TSPAN3O60637 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
TSPAN3O60637 MTND4P12-201ENST00000498999 1377 ntBASIC2.66□□□□□ -1.98
TSPAN3O60637 Y_RNA.142-201ENST00000363491 102 ntBASIC2.66□□□□□ -1.98
TSPAN3O60637 U8.8-201ENST00000365399 135 ntBASIC2.66□□□□□ -1.98
TSPAN3O60637 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
TSPAN3O60637 RNU6-142P-201ENST00000384019 107 ntBASIC2.66□□□□□ -1.98
TSPAN3O60637 RNU6-1274P-201ENST00000384557 107 ntBASIC2.66□□□□□ -1.98
TSPAN3O60637 AL590004.2-201ENST00000404787 371 ntBASIC2.66□□□□□ -1.98
TSPAN3O60637 USP9YP30-201ENST00000430729 455 ntBASIC2.66□□□□□ -1.98
TSPAN3O60637 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.66□□□□□ -1.98
TSPAN3O60637 MTATP6P23-201ENST00000440153 476 ntBASIC2.66□□□□□ -1.98
TSPAN3O60637 AL161788.1-201ENST00000441805 169 ntBASIC2.66□□□□□ -1.98
TSPAN3O60637 MTND4P18-201ENST00000447010 465 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms