Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC-0.12□□□□□ -2.43
SSSCA1O60232 U7.7-201ENST00000459276 60 ntBASIC-0.12□□□□□ -2.43
SSSCA1O60232 snoU109.2-201ENST00000459316 135 ntBASIC-0.12□□□□□ -2.43
SSSCA1O60232 MTND1P22-201ENST00000510572 951 ntBASIC-0.12□□□□□ -2.43
SSSCA1O60232 AC121161.1-201ENST00000510606 652 ntBASIC-0.12□□□□□ -2.43
SSSCA1O60232 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC-0.12□□□□□ -2.43
SSSCA1O60232 AC090888.2-201ENST00000559765 1144 ntBASIC-0.12□□□□□ -2.43
SSSCA1O60232 MIR4298-201ENST00000584380 73 ntBASIC-0.12□□□□□ -2.43
SSSCA1O60232 AC090517.2-201ENST00000614966 680 ntBASIC-0.12□□□□□ -2.43
SSSCA1O60232 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC-0.12□□□□□ -2.43
SSSCA1O60232 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC-0.13□□□□□ -2.43
SSSCA1O60232 SNORA63.3-201ENST00000362682 132 ntBASIC-0.13□□□□□ -2.43
SSSCA1O60232 RNU6-534P-201ENST00000364877 106 ntBASIC-0.13□□□□□ -2.43
SSSCA1O60232 RNU6-505P-201ENST00000384427 107 ntBASIC-0.13□□□□□ -2.43
SSSCA1O60232 MIR140-201ENST00000385282 100 ntBASIC-0.13□□□□□ -2.43
SSSCA1O60232 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.13□□□□□ -2.43
SSSCA1O60232 RNU1-139P-201ENST00000391307 165 ntBASIC-0.13□□□□□ -2.43
SSSCA1O60232 RNU4-27P-201ENST00000410889 139 ntBASIC-0.13□□□□□ -2.43
SSSCA1O60232 AC068533.2-201ENST00000411872 306 ntBASIC-0.13□□□□□ -2.43
SSSCA1O60232 AL596276.1-201ENST00000434465 418 ntBASIC-0.13□□□□□ -2.43
SSSCA1O60232 ART2BP-201ENST00000453501 499 ntBASIC-0.13□□□□□ -2.43
SSSCA1O60232 SNRPGP9-201ENST00000456025 225 ntBASIC-0.13□□□□□ -2.43
SSSCA1O60232 AL122001.1-201ENST00000457027 370 ntBASIC-0.13□□□□□ -2.43
SSSCA1O60232 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC-0.13□□□□□ -2.43
SSSCA1O60232 SNORA76.2-201ENST00000517095 137 ntBASIC-0.13□□□□□ -2.43
SSSCA1O60232 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC-0.13□□□□□ -2.43
SSSCA1O60232 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC-0.13□□□□□ -2.43
SSSCA1O60232 AL353778.1-201ENST00000603149 408 ntBASIC-0.13□□□□□ -2.43
SSSCA1O60232 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC-0.13□□□□□ -2.43
SSSCA1O60232 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC-0.13□□□□□ -2.43
SSSCA1O60232 MIR6718-201ENST00000616153 80 ntBASIC-0.13□□□□□ -2.43
SSSCA1O60232 AC010975.3-201ENST00000618727 978 ntBASIC-0.13□□□□□ -2.43
SSSCA1O60232 AC106754.2-201ENST00000623006 233 ntBASIC-0.13□□□□□ -2.43
SSSCA1O60232 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC-0.13□□□□□ -2.43
SSSCA1O60232 AC010487.4-201ENST00000637027 61 ntBASIC-0.13□□□□□ -2.43
SSSCA1O60232 RNA5SP62-201ENST00000363457 110 ntBASIC-0.14□□□□□ -2.43
SSSCA1O60232 SNORA32.1-201ENST00000364514 115 ntBASIC-0.14□□□□□ -2.43
SSSCA1O60232 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC-0.14□□□□□ -2.43
SSSCA1O60232 SNORA32.2-201ENST00000384049 122 ntBASIC-0.14□□□□□ -2.43
SSSCA1O60232 RNU6-549P-201ENST00000384433 107 ntBASIC-0.14□□□□□ -2.43
SSSCA1O60232 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC-0.14□□□□□ -2.43
SSSCA1O60232 RNA5SP219-201ENST00000390940 113 ntBASIC-0.14□□□□□ -2.43
SSSCA1O60232 AL079342.2-201ENST00000403367 482 ntBASIC-0.14□□□□□ -2.43
SSSCA1O60232 SNRPGP12-201ENST00000449481 213 ntBASIC-0.14□□□□□ -2.43
SSSCA1O60232 AL583843.1-201ENST00000456070 346 ntBASIC-0.14□□□□□ -2.43
SSSCA1O60232 HMGN1P12-201ENST00000499125 195 ntBASIC-0.14□□□□□ -2.43
SSSCA1O60232 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.14□□□□□ -2.43
SSSCA1O60232 AC027338.1-201ENST00000514840 825 ntBASIC-0.14□□□□□ -2.43
SSSCA1O60232 AC023632.1-201ENST00000518463 375 ntBASIC-0.14□□□□□ -2.43
SSSCA1O60232 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC-0.14□□□□□ -2.43
SSSCA1O60232 AC091135.1-201ENST00000585943 307 ntBASIC-0.14□□□□□ -2.43
SSSCA1O60232 AL929325.1-201ENST00000603096 117 ntBASIC-0.14□□□□□ -2.43
SSSCA1O60232 AC008147.4-201ENST00000617570 1204 ntBASIC-0.14□□□□□ -2.43
SSSCA1O60232 AL157786.1-207ENST00000627771 695 ntBASIC-0.14□□□□□ -2.43
SSSCA1O60232 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC-0.15□□□□□ -2.43
SSSCA1O60232 SNORD114-9-201ENST00000364370 72 ntBASIC-0.15□□□□□ -2.43
SSSCA1O60232 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC-0.15□□□□□ -2.43
SSSCA1O60232 RNU6-72P-201ENST00000384285 79 ntBASIC-0.15□□□□□ -2.43
SSSCA1O60232 MIR499A-201ENST00000384903 122 ntBASIC-0.15□□□□□ -2.43
SSSCA1O60232 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.15□□□□□ -2.43
SSSCA1O60232 AC003071.1-201ENST00000451219 789 ntBASIC-0.15□□□□□ -2.43
SSSCA1O60232 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC-0.15□□□□□ -2.43
SSSCA1O60232 AP000797.1-201ENST00000478870 387 ntBASIC-0.15□□□□□ -2.43
SSSCA1O60232 RNU6-1315P-201ENST00000517187 99 ntBASIC-0.15□□□□□ -2.43
SSSCA1O60232 MTND2P7-201ENST00000521337 640 ntBASIC-0.15□□□□□ -2.43
SSSCA1O60232 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC-0.15□□□□□ -2.43
SSSCA1O60232 MIR3678-201ENST00000578455 94 ntBASIC-0.15□□□□□ -2.43
SSSCA1O60232 MIR4305-201ENST00000583252 102 ntBASIC-0.15□□□□□ -2.43
SSSCA1O60232 SNORA4-201ENST00000584302 138 ntBASIC-0.15□□□□□ -2.43
SSSCA1O60232 AC022709.1-201ENST00000615967 87 ntBASIC-0.15□□□□□ -2.43
SSSCA1O60232 AL031667.3-201ENST00000620124 655 ntBASIC-0.15□□□□□ -2.43
SSSCA1O60232 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC-0.15□□□□□ -2.43
SSSCA1O60232 IST1-227ENST00000626438 126 ntTSL 5 BASIC-0.15□□□□□ -2.43
SSSCA1O60232 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC-0.16□□□□□ -2.43
SSSCA1O60232 AC092268.1-201ENST00000342691 405 ntBASIC-0.16□□□□□ -2.44
SSSCA1O60232 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC-0.16□□□□□ -2.44
SSSCA1O60232 RNU6-1067P-201ENST00000384752 107 ntBASIC-0.16□□□□□ -2.44
SSSCA1O60232 RNU6-932P-201ENST00000391108 106 ntBASIC-0.16□□□□□ -2.44
SSSCA1O60232 AL365338.1-201ENST00000422282 858 ntBASIC-0.16□□□□□ -2.44
SSSCA1O60232 DPRXP1-201ENST00000426312 460 ntBASIC-0.16□□□□□ -2.44
SSSCA1O60232 RPL31P35-201ENST00000431058 377 ntBASIC-0.16□□□□□ -2.44
SSSCA1O60232 HMGN2P34-201ENST00000437647 269 ntBASIC-0.16□□□□□ -2.44
SSSCA1O60232 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC-0.16□□□□□ -2.44
SSSCA1O60232 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC-0.16□□□□□ -2.44
SSSCA1O60232 AC011406.1-201ENST00000512440 370 ntBASIC-0.16□□□□□ -2.44
SSSCA1O60232 MTATP6P9-201ENST00000515039 680 ntBASIC-0.16□□□□□ -2.44
SSSCA1O60232 RNU4-77P-201ENST00000516692 156 ntBASIC-0.16□□□□□ -2.44
SSSCA1O60232 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC-0.16□□□□□ -2.44
SSSCA1O60232 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC-0.16□□□□□ -2.44
SSSCA1O60232 AL157871.3-201ENST00000557231 293 ntBASIC-0.16□□□□□ -2.44
SSSCA1O60232 TPRKBP2-201ENST00000565969 475 ntBASIC-0.16□□□□□ -2.44
SSSCA1O60232 MIR4290-201ENST00000583807 95 ntBASIC-0.16□□□□□ -2.44
SSSCA1O60232 SNORA4.3-201ENST00000365564 137 ntBASIC-0.17□□□□□ -2.44
SSSCA1O60232 RNU6-815P-201ENST00000384080 113 ntBASIC-0.17□□□□□ -2.44
SSSCA1O60232 SNORD41-201ENST00000386967 70 ntBASIC-0.17□□□□□ -2.44
SSSCA1O60232 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC-0.17□□□□□ -2.44
SSSCA1O60232 MTND4LP14-201ENST00000429447 288 ntBASIC-0.17□□□□□ -2.44
SSSCA1O60232 AC000111.3-201ENST00000433478 193 ntBASIC-0.17□□□□□ -2.44
SSSCA1O60232 MTCO3P43-201ENST00000440974 771 ntBASIC-0.17□□□□□ -2.44
SSSCA1O60232 AK3P2-201ENST00000507976 429 ntBASIC-0.17□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 140.2 ms