Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 RNU6-487P-201ENST00000365430 104 ntBASIC2.68□□□□□ -1.98
LDB2O43679 SNORA22B-201ENST00000383876 138 ntBASIC2.68□□□□□ -1.98
LDB2O43679 Y_RNA.422-201ENST00000384054 114 ntBASIC2.68□□□□□ -1.98
LDB2O43679 RNU6-692P-201ENST00000384496 107 ntBASIC2.68□□□□□ -1.98
LDB2O43679 Y_RNA.533-201ENST00000384596 114 ntBASIC2.68□□□□□ -1.98
LDB2O43679 RNU6-19P-201ENST00000384718 107 ntBASIC2.68□□□□□ -1.98
LDB2O43679 MIR9-1-201ENST00000385198 89 ntBASIC2.68□□□□□ -1.98
LDB2O43679 RNU6-750P-201ENST00000390946 107 ntBASIC2.68□□□□□ -1.98
LDB2O43679 AL356057.3-201ENST00000402607 340 ntBASIC2.68□□□□□ -1.98
LDB2O43679 RNA5SP184-201ENST00000411071 108 ntBASIC2.68□□□□□ -1.98
LDB2O43679 RNA5SP344-201ENST00000411081 104 ntBASIC2.68□□□□□ -1.98
LDB2O43679 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.68□□□□□ -1.98
LDB2O43679 AL353997.1-201ENST00000432936 108 ntBASIC2.68□□□□□ -1.98
LDB2O43679 RPL21P2-201ENST00000440049 481 ntBASIC2.68□□□□□ -1.98
LDB2O43679 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.68□□□□□ -1.98
LDB2O43679 AC012308.1-201ENST00000451232 178 ntBASIC2.68□□□□□ -1.98
LDB2O43679 AC079354.2-201ENST00000453523 154 ntBASIC2.68□□□□□ -1.98
LDB2O43679 AC107626.1-201ENST00000471084 183 ntBASIC2.68□□□□□ -1.98
LDB2O43679 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.68□□□□□ -1.98
LDB2O43679 RNU6-120P-201ENST00000516077 103 ntBASIC2.68□□□□□ -1.98
LDB2O43679 RNU6-699P-201ENST00000517081 110 ntBASIC2.68□□□□□ -1.98
LDB2O43679 RN7SKP295-201ENST00000517264 153 ntBASIC2.68□□□□□ -1.98
LDB2O43679 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.68□□□□□ -1.98
LDB2O43679 AC025281.1-201ENST00000567026 265 ntBASIC2.68□□□□□ -1.98
LDB2O43679 AC016925.2-201ENST00000605108 242 ntBASIC2.68□□□□□ -1.98
LDB2O43679 PART1_1.1-201ENST00000611761 217 ntBASIC2.68□□□□□ -1.98
LDB2O43679 MIR6733-201ENST00000635723 61 ntBASIC2.68□□□□□ -1.98
LDB2O43679 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.68□□□□□ -1.98
LDB2O43679 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.68□□□□□ -1.98
LDB2O43679 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.68□□□□□ -1.98
LDB2O43679 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
LDB2O43679 AC010889.1-201ENST00000566193 2666 ntBASIC2.68□□□□□ -1.98
LDB2O43679 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.68□□□□□ -1.98
LDB2O43679 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.68□□□□□ -1.98
LDB2O43679 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
LDB2O43679 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
LDB2O43679 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.67□□□□□ -1.98
LDB2O43679 RNY1P16-201ENST00000363063 111 ntBASIC2.67□□□□□ -1.98
LDB2O43679 SNORA33.2-201ENST00000365413 134 ntBASIC2.67□□□□□ -1.98
LDB2O43679 Y_RNA.428-201ENST00000384078 102 ntBASIC2.67□□□□□ -1.98
LDB2O43679 RNU6-748P-201ENST00000384648 107 ntBASIC2.67□□□□□ -1.98
LDB2O43679 SNORA26.7-201ENST00000391288 122 ntBASIC2.67□□□□□ -1.98
LDB2O43679 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.67□□□□□ -1.98
LDB2O43679 AL139281.1-201ENST00000422120 335 ntBASIC2.67□□□□□ -1.98
LDB2O43679 NUP35P1-201ENST00000422734 947 ntBASIC2.67□□□□□ -1.98
LDB2O43679 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.67□□□□□ -1.98
LDB2O43679 AC099799.1-201ENST00000439809 192 ntBASIC2.67□□□□□ -1.98
LDB2O43679 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.67□□□□□ -1.98
LDB2O43679 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.67□□□□□ -1.98
LDB2O43679 GSTA11P-201ENST00000452866 669 ntBASIC2.67□□□□□ -1.98
LDB2O43679 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.67□□□□□ -1.98
LDB2O43679 AP001025.1-201ENST00000486139 332 ntBASIC2.67□□□□□ -1.98
LDB2O43679 Y_RNA.661-201ENST00000516003 99 ntBASIC2.67□□□□□ -1.98
LDB2O43679 RNU6-56P-201ENST00000516986 93 ntBASIC2.67□□□□□ -1.98
LDB2O43679 CKS1BP7-201ENST00000522230 235 ntBASIC2.67□□□□□ -1.98
LDB2O43679 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.67□□□□□ -1.98
LDB2O43679 MIR4635-201ENST00000583759 79 ntBASIC2.67□□□□□ -1.98
LDB2O43679 AC006504.6-201ENST00000590142 199 ntBASIC2.67□□□□□ -1.98
LDB2O43679 AC023043.3-201ENST00000593113 385 ntBASIC2.67□□□□□ -1.98
LDB2O43679 RPL23AP78-201ENST00000599928 470 ntBASIC2.67□□□□□ -1.98
LDB2O43679 AC005034.5-201ENST00000604219 466 ntBASIC2.67□□□□□ -1.98
LDB2O43679 AL356157.2-201ENST00000605122 111 ntBASIC2.67□□□□□ -1.98
LDB2O43679 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.67□□□□□ -1.98
LDB2O43679 AC040896.1-201ENST00000613819 479 ntBASIC2.67□□□□□ -1.98
LDB2O43679 AC091925.1-201ENST00000623204 462 ntBASIC2.67□□□□□ -1.98
LDB2O43679 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.67□□□□□ -1.98
LDB2O43679 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.67□□□□□ -1.98
LDB2O43679 AL136360.1-201ENST00000503377 1900 ntBASIC2.67□□□□□ -1.98
LDB2O43679 AC008669.1-201ENST00000565823 2178 ntBASIC2.67□□□□□ -1.98
LDB2O43679 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
LDB2O43679 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
LDB2O43679 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.67□□□□□ -1.98
LDB2O43679 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.66□□□□□ -1.98
LDB2O43679 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
LDB2O43679 RBBP8P1-201ENST00000449447 1844 ntBASIC2.66□□□□□ -1.98
LDB2O43679 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.66□□□□□ -1.98
LDB2O43679 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
LDB2O43679 RNU1-105P-201ENST00000363470 161 ntBASIC2.66□□□□□ -1.98
LDB2O43679 Y_RNA.148-201ENST00000363557 117 ntBASIC2.66□□□□□ -1.98
LDB2O43679 RNU6-595P-201ENST00000363944 107 ntBASIC2.66□□□□□ -1.98
LDB2O43679 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
LDB2O43679 AC117470.1-201ENST00000381974 330 ntBASIC2.66□□□□□ -1.98
LDB2O43679 RNA5SP390-201ENST00000410191 113 ntBASIC2.66□□□□□ -1.98
LDB2O43679 MCFD2P1-201ENST00000417812 300 ntBASIC2.66□□□□□ -1.98
LDB2O43679 AC008267.5-201ENST00000424928 265 ntBASIC2.66□□□□□ -1.98
LDB2O43679 AL031659.1-201ENST00000447075 539 ntBASIC2.66□□□□□ -1.98
LDB2O43679 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.66□□□□□ -1.98
LDB2O43679 SNORD116.3-201ENST00000517176 78 ntBASIC2.66□□□□□ -1.98
LDB2O43679 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.66□□□□□ -1.98
LDB2O43679 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.66□□□□□ -1.98
LDB2O43679 MIR4672-201ENST00000583126 81 ntBASIC2.66□□□□□ -1.98
LDB2O43679 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.66□□□□□ -1.98
LDB2O43679 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
LDB2O43679 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
LDB2O43679 AC009541.1-201ENST00000438279 2662 ntBASIC2.65□□□□□ -1.98
LDB2O43679 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
LDB2O43679 MIR449A-201ENST00000362113 91 ntBASIC2.65□□□□□ -1.99
LDB2O43679 SNORD32A-201ENST00000364805 84 ntBASIC2.65□□□□□ -1.99
LDB2O43679 RNU1-115P-201ENST00000365329 160 ntBASIC2.65□□□□□ -1.99
LDB2O43679 RNU6-622P-201ENST00000384272 103 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms