Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 Y_RNA.123-201ENST00000363338 102 ntBASIC3.17□□□□□ -1.9
PRPF3O43395 RNU6-1059P-201ENST00000363752 98 ntBASIC3.17□□□□□ -1.9
PRPF3O43395 RNU6-1188P-201ENST00000363795 107 ntBASIC3.17□□□□□ -1.9
PRPF3O43395 Y_RNA.259-201ENST00000364619 101 ntBASIC3.17□□□□□ -1.9
PRPF3O43395 RNU6-968P-201ENST00000384076 107 ntBASIC3.17□□□□□ -1.9
PRPF3O43395 Y_RNA.510-201ENST00000384511 114 ntBASIC3.17□□□□□ -1.9
PRPF3O43395 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.17□□□□□ -1.9
PRPF3O43395 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.17□□□□□ -1.9
PRPF3O43395 SNORD19B-201ENST00000459623 84 ntBASIC3.17□□□□□ -1.9
PRPF3O43395 AC090525.1-201ENST00000479116 478 ntBASIC3.17□□□□□ -1.9
PRPF3O43395 RPL23AP94-201ENST00000512518 302 ntBASIC3.17□□□□□ -1.9
PRPF3O43395 Y_RNA.670-201ENST00000516255 105 ntBASIC3.17□□□□□ -1.9
PRPF3O43395 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.17□□□□□ -1.9
PRPF3O43395 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.17□□□□□ -1.9
PRPF3O43395 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.17□□□□□ -1.9
PRPF3O43395 MTCO3P13-201ENST00000577757 781 ntBASIC3.17□□□□□ -1.9
PRPF3O43395 LARP7P3-201ENST00000579888 337 ntBASIC3.17□□□□□ -1.9
PRPF3O43395 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.17□□□□□ -1.9
PRPF3O43395 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.17□□□□□ -1.9
PRPF3O43395 AP000654.2-201ENST00000605633 586 ntBASIC3.17□□□□□ -1.9
PRPF3O43395 AC009229.3-201ENST00000608056 282 ntBASIC3.17□□□□□ -1.9
PRPF3O43395 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.17□□□□□ -1.9
PRPF3O43395 AL359198.2-201ENST00000611836 194 ntBASIC3.17□□□□□ -1.9
PRPF3O43395 AC107871.2-201ENST00000612894 502 ntBASIC3.17□□□□□ -1.9
PRPF3O43395 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.17□□□□□ -1.9
PRPF3O43395 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.17□□□□□ -1.9
PRPF3O43395 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PRPF3O43395 AL365361.1-201ENST00000566942 3481 ntBASIC3.16□□□□□ -1.9
PRPF3O43395 Y_RNA.11-201ENST00000362375 109 ntBASIC3.16□□□□□ -1.9
PRPF3O43395 Y_RNA.504-201ENST00000384481 104 ntBASIC3.16□□□□□ -1.9
PRPF3O43395 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
PRPF3O43395 RNY4P36-201ENST00000391116 96 ntBASIC3.16□□□□□ -1.9
PRPF3O43395 SNORA75.4-201ENST00000391278 119 ntBASIC3.16□□□□□ -1.9
PRPF3O43395 FO393413.1-201ENST00000402892 195 ntBASIC3.16□□□□□ -1.9
PRPF3O43395 MTCYBP2-201ENST00000407745 171 ntBASIC3.16□□□□□ -1.9
PRPF3O43395 RNU6-1140P-201ENST00000410517 106 ntBASIC3.16□□□□□ -1.9
PRPF3O43395 RNA5SP21-201ENST00000410917 96 ntBASIC3.16□□□□□ -1.9
PRPF3O43395 COTL1P1-201ENST00000422309 375 ntBASIC3.16□□□□□ -1.9
PRPF3O43395 USMG5P1-201ENST00000425964 177 ntBASIC3.16□□□□□ -1.9
PRPF3O43395 AC103975.1-201ENST00000482506 483 ntBASIC3.16□□□□□ -1.9
PRPF3O43395 RPL23AP70-201ENST00000483361 460 ntBASIC3.16□□□□□ -1.9
PRPF3O43395 RN7SKP132-201ENST00000516001 208 ntBASIC3.16□□□□□ -1.9
PRPF3O43395 RNU5F-2P-201ENST00000516066 82 ntBASIC3.16□□□□□ -1.9
PRPF3O43395 Y_RNA.718-201ENST00000517110 102 ntBASIC3.16□□□□□ -1.9
PRPF3O43395 RN7SKP40-201ENST00000517211 242 ntBASIC3.16□□□□□ -1.9
PRPF3O43395 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.16□□□□□ -1.9
PRPF3O43395 EIF4BP1-201ENST00000554881 351 ntBASIC3.16□□□□□ -1.9
PRPF3O43395 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.16□□□□□ -1.9
PRPF3O43395 AC109446.1-201ENST00000566172 220 ntBASIC3.16□□□□□ -1.9
PRPF3O43395 MIR5696-201ENST00000578474 85 ntBASIC3.16□□□□□ -1.9
PRPF3O43395 MIR3923-201ENST00000579521 83 ntBASIC3.16□□□□□ -1.9
PRPF3O43395 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.16□□□□□ -1.9
PRPF3O43395 AC011494.1-201ENST00000596454 237 ntBASIC3.16□□□□□ -1.9
PRPF3O43395 AL034555.1-201ENST00000604816 211 ntBASIC3.16□□□□□ -1.9
PRPF3O43395 AL627309.6-201ENST00000606857 840 ntBASIC3.16□□□□□ -1.9
PRPF3O43395 AC009318.2-201ENST00000610917 651 ntBASIC3.16□□□□□ -1.9
PRPF3O43395 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3.16□□□□□ -1.9
PRPF3O43395 SNORD98-201ENST00000636377 67 ntBASIC3.16□□□□□ -1.9
PRPF3O43395 AL669831.3-213ENST00000636676 183 ntBASIC3.16□□□□□ -1.9
PRPF3O43395 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PRPF3O43395 AC108206.1-201ENST00000570186 4159 ntBASIC3.16□□□□□ -1.9
PRPF3O43395 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.16□□□□□ -1.9
PRPF3O43395 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
PRPF3O43395 AC233981.2-201ENST00000611524 1614 ntBASIC3.15□□□□□ -1.9
PRPF3O43395 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
PRPF3O43395 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.15□□□□□ -1.9
PRPF3O43395 RNU6-1159P-201ENST00000362933 107 ntBASIC3.15□□□□□ -1.91
PRPF3O43395 SNORA80A-201ENST00000363922 136 ntBASIC3.15□□□□□ -1.91
PRPF3O43395 SNORD56.5-201ENST00000364281 72 ntBASIC3.15□□□□□ -1.91
PRPF3O43395 SNORD116-29-201ENST00000384516 83 ntBASIC3.15□□□□□ -1.91
PRPF3O43395 MIR218-1-201ENST00000384999 110 ntBASIC3.15□□□□□ -1.91
PRPF3O43395 RPS26P42-201ENST00000413485 326 ntBASIC3.15□□□□□ -1.91
PRPF3O43395 AL590135.1-201ENST00000422215 156 ntBASIC3.15□□□□□ -1.91
PRPF3O43395 AC019205.3-201ENST00000424573 156 ntBASIC3.15□□□□□ -1.91
PRPF3O43395 AC008267.5-201ENST00000424928 265 ntBASIC3.15□□□□□ -1.91
PRPF3O43395 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PRPF3O43395 AC105272.1-201ENST00000438604 198 ntBASIC3.15□□□□□ -1.91
PRPF3O43395 AC016700.2-201ENST00000446011 156 ntBASIC3.15□□□□□ -1.91
PRPF3O43395 RN7SKP210-201ENST00000459176 261 ntBASIC3.15□□□□□ -1.91
PRPF3O43395 AC073901.1-201ENST00000462471 408 ntBASIC3.15□□□□□ -1.91
PRPF3O43395 AC015911.1-201ENST00000495111 156 ntBASIC3.15□□□□□ -1.91
PRPF3O43395 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.15□□□□□ -1.91
PRPF3O43395 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.15□□□□□ -1.91
PRPF3O43395 RNU6-1213P-201ENST00000517075 94 ntBASIC3.15□□□□□ -1.91
PRPF3O43395 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.15□□□□□ -1.91
PRPF3O43395 CYP4A27P-201ENST00000567218 190 ntBASIC3.15□□□□□ -1.91
PRPF3O43395 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.15□□□□□ -1.91
PRPF3O43395 ELOCP29-201ENST00000588193 334 ntBASIC3.15□□□□□ -1.91
PRPF3O43395 AC126177.8-201ENST00000618339 1015 ntBASIC3.15□□□□□ -1.91
PRPF3O43395 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PRPF3O43395 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.14□□□□□ -1.91
PRPF3O43395 ZNF299P-201ENST00000406845 1804 ntBASIC3.14□□□□□ -1.91
PRPF3O43395 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.14□□□□□ -1.91
PRPF3O43395 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.14□□□□□ -1.91
PRPF3O43395 RNU4-9P-201ENST00000364951 139 ntBASIC3.14□□□□□ -1.91
PRPF3O43395 Y_RNA.431-201ENST00000384086 102 ntBASIC3.14□□□□□ -1.91
PRPF3O43395 RNU6-842P-201ENST00000384269 107 ntBASIC3.14□□□□□ -1.91
PRPF3O43395 MIR9-1-201ENST00000385198 89 ntBASIC3.14□□□□□ -1.91
PRPF3O43395 SNORD88.1-201ENST00000408684 91 ntBASIC3.14□□□□□ -1.91
PRPF3O43395 RNA5SP492-201ENST00000411330 114 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms