Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
HOXA2O43364 SPRR2C-201ENST00000290702 219 ntBASIC4.71□□□□□ -1.66
HOXA2O43364 Y_RNA.40-201ENST00000362645 93 ntBASIC4.71□□□□□ -1.66
HOXA2O43364 SNORD114-19-201ENST00000363072 75 ntBASIC4.71□□□□□ -1.66
HOXA2O43364 RNU1-83P-201ENST00000363426 164 ntBASIC4.71□□□□□ -1.66
HOXA2O43364 SNORA25.7-201ENST00000364375 127 ntBASIC4.71□□□□□ -1.66
HOXA2O43364 SNORA22-201ENST00000383907 134 ntBASIC4.71□□□□□ -1.66
HOXA2O43364 Y_RNA.584-201ENST00000391090 114 ntBASIC4.71□□□□□ -1.66
HOXA2O43364 AL592291.1-201ENST00000403830 352 ntBASIC4.71□□□□□ -1.66
HOXA2O43364 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC4.71□□□□□ -1.66
HOXA2O43364 RNU6-383P-201ENST00000410864 94 ntBASIC4.71□□□□□ -1.66
HOXA2O43364 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.71□□□□□ -1.66
HOXA2O43364 AL158823.1-201ENST00000418441 478 ntBASIC4.71□□□□□ -1.66
HOXA2O43364 Z74021.1-201ENST00000423610 407 ntBASIC4.71□□□□□ -1.66
HOXA2O43364 RNA5SP49-201ENST00000516450 115 ntBASIC4.71□□□□□ -1.66
HOXA2O43364 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.71□□□□□ -1.66
HOXA2O43364 AC106785.1-201ENST00000565935 262 ntBASIC4.71□□□□□ -1.66
HOXA2O43364 AC091152.3-201ENST00000604227 325 ntBASIC4.71□□□□□ -1.66
HOXA2O43364 AC069200.1-201ENST00000609511 323 ntBASIC4.71□□□□□ -1.66
HOXA2O43364 AC112484.5-201ENST00000624189 228 ntBASIC4.71□□□□□ -1.66
HOXA2O43364 U6.95-201ENST00000636931 70 ntBASIC4.71□□□□□ -1.66
HOXA2O43364 MIR3914-2-201ENST00000637339 95 ntBASIC4.71□□□□□ -1.66
HOXA2O43364 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HOXA2O43364 AC139713.2-215ENST00000641428 5037 ntBASIC4.71□□□□□ -1.66
HOXA2O43364 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HOXA2O43364 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
HOXA2O43364 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.71□□□□□ -1.66
HOXA2O43364 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HOXA2O43364 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HOXA2O43364 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.71□□□□□ -1.66
HOXA2O43364 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HOXA2O43364 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.7□□□□□ -1.66
HOXA2O43364 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
HOXA2O43364 AL513302.2-201ENST00000562313 1842 ntBASIC4.7□□□□□ -1.66
HOXA2O43364 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HOXA2O43364 RNU6-597P-201ENST00000365620 102 ntBASIC4.7□□□□□ -1.66
HOXA2O43364 RNU1-63P-201ENST00000383902 164 ntBASIC4.7□□□□□ -1.66
HOXA2O43364 SNORA37-201ENST00000384504 129 ntBASIC4.7□□□□□ -1.66
HOXA2O43364 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HOXA2O43364 HMGN2P7-201ENST00000456186 273 ntBASIC4.7□□□□□ -1.66
HOXA2O43364 MIR3609-201ENST00000582661 80 ntBASIC4.7□□□□□ -1.66
HOXA2O43364 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
HOXA2O43364 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HOXA2O43364 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HOXA2O43364 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.69□□□□□ -1.66
HOXA2O43364 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
HOXA2O43364 AC010733.2-201ENST00000589496 5702 ntBASIC4.69□□□□□ -1.66
HOXA2O43364 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
HOXA2O43364 RNU6-235P-201ENST00000362644 107 ntBASIC4.69□□□□□ -1.66
HOXA2O43364 RNY1P11-201ENST00000363759 113 ntBASIC4.69□□□□□ -1.66
HOXA2O43364 U8.7-201ENST00000364940 136 ntBASIC4.69□□□□□ -1.66
HOXA2O43364 SNORA67.2-201ENST00000384300 149 ntBASIC4.69□□□□□ -1.66
HOXA2O43364 AL591034.1-201ENST00000407447 340 ntBASIC4.69□□□□□ -1.66
HOXA2O43364 AIMP1P2-201ENST00000425294 312 ntBASIC4.69□□□□□ -1.66
HOXA2O43364 RPL23AP82-202ENST00000427528 469 ntBASIC4.69□□□□□ -1.66
HOXA2O43364 RPS26P2-201ENST00000440331 348 ntBASIC4.69□□□□□ -1.66
HOXA2O43364 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC4.69□□□□□ -1.66
HOXA2O43364 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC4.69□□□□□ -1.66
HOXA2O43364 RPS3P1-201ENST00000456781 192 ntBASIC4.69□□□□□ -1.66
HOXA2O43364 AC117454.1-201ENST00000491120 168 ntBASIC4.69□□□□□ -1.66
HOXA2O43364 VWA8P1-201ENST00000510889 176 ntBASIC4.69□□□□□ -1.66
HOXA2O43364 RNU6-772P-201ENST00000516042 105 ntBASIC4.69□□□□□ -1.66
HOXA2O43364 MIR3936-201ENST00000584304 110 ntBASIC4.69□□□□□ -1.66
HOXA2O43364 AL110115.1-201ENST00000614396 364 ntBASIC4.69□□□□□ -1.66
HOXA2O43364 AC068647.2-201ENST00000637380 353 ntBASIC4.69□□□□□ -1.66
HOXA2O43364 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.69□□□□□ -1.66
HOXA2O43364 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.69□□□□□ -1.66
HOXA2O43364 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.69□□□□□ -1.66
HOXA2O43364 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HOXA2O43364 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HOXA2O43364 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.68□□□□□ -1.66
HOXA2O43364 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.68□□□□□ -1.66
HOXA2O43364 MAPK10-303ENST00000641324 3959 ntBASIC4.68□□□□□ -1.66
HOXA2O43364 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.68□□□□□ -1.66
HOXA2O43364 RNU1-14P-201ENST00000362759 152 ntBASIC4.68□□□□□ -1.66
HOXA2O43364 MIR518C-201ENST00000384822 101 ntBASIC4.68□□□□□ -1.66
HOXA2O43364 SNORA36B-201ENST00000410438 131 ntBASIC4.68□□□□□ -1.66
HOXA2O43364 SNORA74C-2-201ENST00000411179 201 ntBASIC4.68□□□□□ -1.66
HOXA2O43364 AL157831.1-201ENST00000426134 473 ntBASIC4.68□□□□□ -1.66
HOXA2O43364 AC245047.4-201ENST00000433189 144 ntBASIC4.68□□□□□ -1.66
HOXA2O43364 HMGN2P20-201ENST00000437531 273 ntBASIC4.68□□□□□ -1.66
HOXA2O43364 RPS4XP2-201ENST00000458402 793 ntBASIC4.68□□□□□ -1.66
HOXA2O43364 RNA5SP310-201ENST00000459084 116 ntBASIC4.68□□□□□ -1.66
HOXA2O43364 RNU7-115P-201ENST00000516433 55 ntBASIC4.68□□□□□ -1.66
HOXA2O43364 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.68□□□□□ -1.66
HOXA2O43364 RPL23AP97-201ENST00000568955 471 ntBASIC4.68□□□□□ -1.66
HOXA2O43364 AC012493.2-201ENST00000595083 291 ntBASIC4.68□□□□□ -1.66
HOXA2O43364 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HOXA2O43364 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HOXA2O43364 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.67□□□□□ -1.66
HOXA2O43364 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.67□□□□□ -1.66
HOXA2O43364 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HOXA2O43364 SNORD114-7-201ENST00000362520 77 ntBASIC4.67□□□□□ -1.66
HOXA2O43364 RNA5SP307-201ENST00000362863 116 ntBASIC4.67□□□□□ -1.66
HOXA2O43364 SNORD45.3-201ENST00000363836 72 ntBASIC4.67□□□□□ -1.66
HOXA2O43364 Y_RNA.309-201ENST00000365046 111 ntBASIC4.67□□□□□ -1.66
HOXA2O43364 MIR548B-201ENST00000385247 97 ntBASIC4.67□□□□□ -1.66
HOXA2O43364 MIR147B-201ENST00000390185 80 ntBASIC4.67□□□□□ -1.66
HOXA2O43364 Y_RNA.622-201ENST00000411091 108 ntBASIC4.67□□□□□ -1.66
HOXA2O43364 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms